CsaV3_4G005440 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G005440
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Thiamine-phosphate synthase
Location	chr4: 3621333 .. 3624265 (-)
RNA-Seq Expression	CsaV3_4G005440
Synteny	CsaV3_4G005440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAGGGGGCCAAATTTCAAATATGCATCCAAACTCATTTTGCTCCCAATTTAATATTCATTTTATAATAACTTGAATCCCAGGCCCGAAGGTTACTACGGCGATACATTTTTTCAACGAACAGAGCATAGGGAAGGATTACTGGGGTTTGTTTTCTTCTCTGTCTGCTTTTGTTAGTAAAAAAGAAAAATTAAGATGTTTGGGACTGCAGTAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGTAACAATGCTTTTTCTGTTTCCATTCCCTCATTTTTTAGCTTTCTCTTCAAATTTACGAATTACAAATTCCTTGTGTAACATCAATTATGTTAACACAGAAATTAGAATGATGGAATTCTGTTAGATGCTTTGATTCTTTTAATTGGGGTTTAGTTGTGACCTATAGATAGAAATGAGAATTTCGGTTTGATTTCTTACTGAGTCCTGGTTAAATGAGAAATGCCGTATTCTCAACACTCATAAGGGCATAAACATTGGGGATCCTTGATTAAAATGCTTTTAGTTTTAAGTTGTTGGACTTGGAATGTATCTGGCAGGGCTCAGTAGGAGAGGTGATTTTCAGTTTTACCTCCTAGGAAATTTTAGAGGTGGCTAGAAGGCTCGGTGCATAATTTGGTGGCAGGGTAGTTTCTTTGCTTTTTTGTGGAGAATTTAGCTTGAGAAGAATTATTGGATTTTTAGAGAGGTAGAGAACCCTAAATTTGAGAGGTGGCTAGCTTTAACGCTTCCTTATGGGTGTCAATCACTGGATTATTTTTGTAATTATAACCTTGTCCTTTTATAATTGTATCATTTCTGAAGATAGAATCAGTTTTGCTCTTTCGTAATTGTTGTCCAGAAGGATTTAGATGTTGCATAACAGCTCAACTAGAGTGGGCAATGTCACAGCTCTAGATCCTTTTTATCCTGTAACTTTGTGCTGTTTTATTAGTTATCTATGTCAGTAAGTGGCGTTGTACTAAGTTGATAATTGTCTATTCTTTTCCTTTCCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGAATGCCTACAGGTTACCTGTAAAGAAGCTTTGTTTTCTTGTTTCTTTATTTCTTTTTCATGGAAGTTGTTCTTTAGTTTTTCCACAAACGACAACTATATAGAACGAATGACCATAGGCAAGGATTTAAACACCGACCTTGTATAATTTTAGATCCTTAATCTTTTAGATAACAGATTGTATTGAGGGTCGTTAGTCAGTTGATACTCCTTTTGCCTTTGGTTCTCCCTAAAACATATATATTAGACTGTTTCCTAAAAGCCTTGCTGATGTGAAAATCCATTGTTTATTGACCGGTAAGTTATAATTAGAATCTTTTTGTGAAACAATTAACAAACTTTTGTGTGTTGCTGAAGCAATTCCAATGCTCAAATTAGTTCAGATGCTAAACGTGCTAAGAGCTTCTACTGTTGAATTTGATATTTGCTTGGTAGAATAAGAAAATAGACTGTGGAGTGTTAGATTGATTCACTAATGTGTAGTGATCTCGACCAAAGAAGCCTGACAATCAAGTTAGGAATCTGGGTTTGTAGTGAAGTAAAAGAGATAACTGATGACCAAGTAGACGTTAAACCTATTTGGTTACTCTGAATTCCTTAATATGTTGAGAGATTAGTTGCTTTTTCTATAATGTGGTTAATAGTTCATGTTGTATGCAATGCAAAAATAGGCCAAAAATGGGGTAGAAATAGAGTTTTAGGATTGATTGTAGAAAAGTTGAGATTTAGGATAAATTGGAGGTGAAATGACGAAAATACCCTCTTTTATTTTCCTTCCTCTTTTCTTCTTTTTCCTTTTCTTCAACCCGAAGACAGAAGGCCGTTCAAAAGAAAAAACGTAAACTCGCATTTGAACTCTCCCGCGTCTGCAGTTACCCTCTTCAACTCTCTCCCGCCTCCGGTGAACGTTTTTCTCTTCCGTCCATTTCTTCTCCACTTCCATCCATTTCTTCTTCACGACTCTCCGCTATATTTTCCGATTTCAACTTGTTCACCGAACGTCTCCATTTCTTCTGCACGGGTCTCCATTTCGACTTCATCTCCGGCGGACGCTTCTCCACTTCCATCCATTTCGATTTCAGGTTTGTTTTCACCGGACCTCTCCATTTCTTATCCACTCCTCTACATTGGCAGTGCCGTATCCATCATCTTTGAAGTCAAGTGAGTAATAAAATCTCAGTTTTTTTTTTAGAGTTAGTCTGTTGTAGCTTATTTATTATTACAGTATTCCATCTTGTTTGTTTAAGTTGTCTGTTAAGATGTGAGTTTTTTGTTTTTGGCACATTTTGGAGAAGAAATGCATGTCATATGCACACAGACATAGAGAACCGTGGGAGCCATTCTGTTTTTAGGAAGAAAAACCATTTCCTTTGCAATGTACTGTAATAATAGAAAAACCATACCTTGGAGTTTAGAACTTGAATTCGAACATATATTTGGTATCCCATATAAACTCTGCAAAGTTACCAGTACAATAGATATGTGCTAAACATGCATTCTAAATATTGTATTCTAAAGACATTATCATAAGCTGCATTGTTGAAAGACCATTTCCTTTGCCTTGAAGTTTTCCATCATCTCTCACCTATCAGCAC

mRNA sequence

ATGTTTGGGACTGCAGTAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGA

Coding sequence (CDS)

ATGTTTGGGACTGCAGTAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGA

Protein sequence

MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPKRP*

Homology

[Close]

BLAST of CsaV3_4G005440 vs. NCBI nr
Match: XP_004146493.1 (uncharacterized protein LOC101203168 [Cucumis sativus] >KGN53287.1 hypothetical protein Csa_015181 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
           RP
Sbjct: 121 RP 122

[Close]

BLAST of CsaV3_4G005440 vs. NCBI nr
Match: XP_008452112.1 (PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+RCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFRTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. NCBI nr
Match: XP_038881247.1 (uncharacterized protein LOC120072805 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 3.9e-57
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TAVR FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAVRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RL+CNHVGPHKQFLYTTWFTKPNF QAKQ  RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLICNHVGPHKQFLYTTWFTKPNFGQAKQPGRNASQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. NCBI nr
Match: XP_022942849.1 (uncharacterized protein LOC111447756 [Cucurbita moschata] >XP_023527194.1 uncharacterized protein LOC111790503 [Cucurbita pepo subsp. pepo] >KAG6600588.1 hypothetical protein SDJN03_05821, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031228.1 hypothetical protein SDJN02_05268, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+R FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RLMCNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. NCBI nr
Match: XP_022983421.1 (uncharacterized protein LOC111482027 [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+R FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RL+CNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLLCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. ExPASy TrEMBL
Match: A0A0A0KY02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045020 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.5e-65
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
           RP
Sbjct: 121 RP 122

[Close]

BLAST of CsaV3_4G005440 vs. ExPASy TrEMBL
Match: A0A1S3BSH8 (uncharacterized protein LOC103493216 OS=Cucumis melo OX=3656 GN=LOC103493216 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.2e-63
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+RCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFRTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. ExPASy TrEMBL
Match: A0A6J1FSI5 (uncharacterized protein LOC111447756 OS=Cucurbita moschata OX=3662 GN=LOC111447756 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.6e-56
Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+R FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RLMCNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. ExPASy TrEMBL
Match: A0A6J1J258 (uncharacterized protein LOC111482027 OS=Cucurbita maxima OX=3661 GN=LOC111482027 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.0e-56
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+R FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RL+CNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLLCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. ExPASy TrEMBL
Match: A0A6J1C6J6 (uncharacterized protein LOC111008437 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008437 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 106/122 (86.89%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTA+R FATKPKPKMKPIEL TPPEQTQTITR IFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RLMCNH+G HKQFLYTTWFTK NF Q+K   RN S PK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFTKSNFGQSKPQGRNSSPPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CsaV3_4G005440 vs. TAIR 10
Match: AT5G49410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-49
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 3   GTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRG 62
           G   R FATKPKPKMKPIEL TPPEQTQTITR IFDI+K+HGPLTIAETWDRV+EVGLRG
Sbjct: 18  GMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRG 77

Query: 63  LTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPN 106
           LTSKRHMKI++RWMRERQK++L+CNHVGPHKQFLYTTWFTK N
Sbjct: 78  LTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHN 120

[Close]

BLAST of CsaV3_4G005440 vs. TAIR 10
Match: AT5G49410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-49
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 3   GTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRG 62
           G   R FATKPKPKMKPIEL TPPEQTQTITR IFDI+K+HGPLTIAETWDRV+EVGLRG
Sbjct: 18  GMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRG 77

Query: 63  LTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPN 106
           LTSKRHMKI++RWMRERQK++L+CNHVGPHKQFLYTTWFTK N
Sbjct: 78  LTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHN 120

[Close]

BLAST of CsaV3_4G005440 vs. TAIR 10
Match: AT1G73940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 6   VRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRGLTS 65
           VR  + +    ++ I  K P ++   I+ +++D+ K HGPL++  TW R QE G+ GL S
Sbjct: 31  VRYMSRERAVNVRKINPKVPIQEAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNS 90

Query: 66  KRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQ 109
           K HMK++++WMR ++ ++L+CN VG  K+F +T     P  EQ
Sbjct: 91  KTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHTVLPEDPLQEQ 133

The following BLAST results are available for this feature:

BLAST of CsaV3_4G005440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146493.1	2.0e-64	100.00	uncharacterized protein LOC101203168 [Cucumis sativus] >KGN53287.1 hypothetical ...	[more]
XP_008452112.1	1.1e-62	97.54	PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo]	[more]
XP_038881247.1	3.9e-57	90.98	uncharacterized protein LOC120072805 [Benincasa hispida]	[more]
XP_022942849.1	7.4e-56	89.34	uncharacterized protein LOC111447756 [Cucurbita moschata] >XP_023527194.1 unchar...	[more]
XP_022983421.1	1.7e-55	88.52	uncharacterized protein LOC111482027 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G005440 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G005440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY02	9.5e-65	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045020 PE=4 SV=1	[more]
A0A1S3BSH8	5.2e-63	97.54	uncharacterized protein LOC103493216 OS=Cucumis melo OX=3656 GN=LOC103493216 PE=...	[more]
A0A6J1FSI5	3.6e-56	89.34	uncharacterized protein LOC111447756 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A6J1J258	8.0e-56	88.52	uncharacterized protein LOC111482027 OS=Cucurbita maxima OX=3661 GN=LOC111482027...	[more]
A0A6J1C6J6	1.2e-54	86.89	uncharacterized protein LOC111008437 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CsaV3_4G005440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49410.1	1.9e-49	85.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G49410.2	1.9e-49	85.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G73940.1	1.9e-17	37.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35110:SF3	OS08G0360000 PROTEIN	coord: 1..117
None	No IPR available	PANTHER	PTHR35110	EXPRESSED PROTEIN	coord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G005440.1	CsaV3_4G005440.1	mRNA