CsaV3_4G004470 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G004470
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionlate embryogenesis abundant protein At5g17165-like
Locationchr4: 2794167 .. 2801392 (-)
RNA-Seq ExpressionCsaV3_4G004470
SyntenyCsaV3_4G004470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAATCTCTTCACGTGACTTTATTTTAATGTTATAAAAGGATAAAAGGCGTTAACTGACGGTGTTAGGGGTAGCTGGGGAAAGAGAAAATGCGCAGACCTTTTATTATTATTATTATTTGAGAAGGAAAAATGCATGACTTAACCACTGTTGGTGGGAAAGGGAATAAAGCAAACAGAATATGCTAATGAGACGAGAGAAGATGCGATGACCGTGAAGAAAGGGAAGGCCACGTGTTCCAATAGGAAGTTAAAAATTTAAAAGGAAATTCCGTACGCGAAATGAAAATAGGTGCGGACGGACGGAGAAGGCAATTTGCGTTGCGGATGAGAAAGGTTCTCTAGTTTTGTCGTCTTTTGGGGTACGACGACGTATAGGTGGATTATAAATACGAAATTACCGCTAACGATTGGAGATCAGAAGCGATTAATCGCCATTTTCTTTCTTCTTCTTCTTCATCATCTCTCTCTCTCTCTCTCTGCTTAGGTGCAGTTTTTTCTGGTTCTTTGTTTTTTCTCCATCTCTCTCTCTCTTTAAGCCTGAATTGTATGGCCGCTAATTCGAGGAGCGTAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCTGCGATCCACTTCGTAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGTTCTTCTTCTTCCTTTTCTTTGATTTCTTCTTGTGCGAATGTTCATGAAGTTGTAGTGCTGTTAATTTGTTTGTGCTATTCTTTGGTAAATAGCTTTATTGCATTATTGTTGCGAAACTTTCTTTGAAAAGTTGTTCTGAATGTTGTTGCATTTCTTCTTCTTCACGCTGATTGCCTTTTTTTTAACAACTTCTCACTGACGCATAATTAAGCTGAACGTCTTCTTCACGACGTAACTTTTAGGTCCTTCCTAGACTAGAATCTCTTCGATTGATCGTATTCTGATACTCGGTTCCTTCTGATCTTGGTCGTTTCTTCTACTAATAAGGTTTTAGGATTCTAATTTCCCTTCGATTTTCCCGCCATATCCAATATTACGCCCAATTTGCGTAGAAATTGGAAAATGATGCTTTCCTCACTCTGCCTTTTTCCTCCGCTCTTCCTCGTCGTTTTTTTATTCAAATTTGTTAGACTAGTTTTTACGTTCACGTTGTTGATTTGTCAATTCTGCTTGCTGTGTGGAAGAAGATTTGGAATTAGAGAGTGCGAGTTCTTATTCCTTTGAAACTCAGATGAAATTTGGGGAAGAGGCGTAGGTGGAGTAAATCCGGGGTTCGAAACTCGAAAGTTACTCTGTCCAAAATCGTGAATATAAAAATTGAATAACTACTTTTTCTTTTTTCTTCTTATTATTAGTAAACTAATTTATCTTTTAATATAATAAACAAGTCATCCATTATAAGATTTATTACTTAATTTTTTCCAACAAAAAGGTCAGTCAATATTATTATTTTTTTAAAAAAAGTGGATATTATGAGCTGTTATACATTTTATTTGTTGGTATCATTTTTAGAATTTGGCTTATTTACTAATTTTTTTACTTTACATCTATGCTGAGATAATAATCCAGGGTAGAGTTAAACATAGTCGTTTTAATCTTAATTATCTCCTCTTCAAGCATTTTTCAACTTTATGCAAACCTTGAAATTGCATATGGCGTCAGACATAGTAAATTAGTGGGGACAAGACTTTATTGGTGCAATATCTATGGTATTTAATACTTGTAGCATTACAATTATTTTAGTTTGATCAAGCGACAAACTAAATTATGAAGATTTTAACACTTAATATTAATTGTAATTTAGTATGGTCCCAAAGTAATACCTAATATCAAGATTAACATAGTGTTTAAAATTTTTTATTTGTTTTTGTAATTTGCCTAGGAATTCAATTGGAGGGGAGATAGATTTTTCAAAAATATAATAAAAATAAGAAAATAGTTCCCAGTGAAAACATGAATTTTCTTACAAAATATTTAATAGAATATAAGAACTTATCACGTTGTGCCTAATTTATAAATATATACTTCCAAAGGAATAGAAGAGTGCTGACAAATATATTGATTAGGTGTGAAAATATTTAATGTAAAGATTAGTTCTTAAAAAAATTAATATATAGATTCGTTGACTTCACTTCGCTAAAATTATTTCCATTCCACAGTTCTTTAATAAATGTTTTAAAACTGGTCATTGAGTAGAAAACTCACAAAAAAAATCAATGGAAAATTGTGGGTATTTGAACCTCAATTCTCATTTCAAGTTATCCACTTACACTATTCTATTCTAAAAACTTTTCCTCTTACCTAGAAAAGCAAATAATCATCCCAGGAGGATTTTTCTTTCTATGACTCTTCTCATGGAACTTATATATAAATAATAGAAATTGATTAAAATAATTTTATCTTGTTATTTTAGGTTTTGTTATATTTGAAAATATTTTTAATTATTTTAGTATTTAAAGGATGAAATGTTTTTTCAAAGTTGAAATTATATTTTTTTTATCTGAATGAGGTCTAACTTCCTATTGGTTTCCGAATTGTTTTTGGTTTTGTTTCATTTCCATATCCTTACTTAAAGTGCTACAATTTTGTCATTATATTTTGAATTTTTTGAATTTATATTTTAACTTTGGTTTTTTATTAGATACGTATATTTTGTTCTTAATATTAATACTTATTGTTTGATTTTGAAGAATTATAATAATTAATTGAGCTTTATGAACAGGGTAGATTTAAATTTGAAATTTTACTTTTAAATTATTTTGAATTAACGGATAATATTTATTGTTTATAGAAAGTCAAGGTTAATAAGATTATAGAAAAGAAAACTTTTATAACTCATGATTAAGTTGAAACTGTATCCAAATCTTAAAATAAGATAGAAACTAAAAGACTAAACAAAATATAATTCATAATTCATAATGACTCAAAAAAGTGTTATTTTGAAATTTAGAAATGAAATATTTAGATTTAGAAATAAAAACTTAAAAAACTAAAACTGTACCATTTTCCTATGCAAAAGAGATGAGTAGGGTAGGGTGTTGGTGTAAGCATCTTTAGTGCCCCAATTTGAAGCTATGAAAGCTGAAAAAGGAAACTCCCAAGTCTAAAGCCTAAAGATATTAGAGTGAGTGGATCCACAGTTAATGCTAAGCGTCAGTGATGTGATTTGGCCTTATGCTCATCCACTCATTTTAAGCTGACATTTTGATTTCACTATTTTTTTTCAATTCTTTCCTTGAATTTCTGTCTCAATCCGACTCTACTTCGGCCGTGGATTGTGACTAAATGGTCTGAATAATAAATACCATAGAATTTGGGTCGGTAAGAGAGGGGACTAAGTAGGGATTTCTCATCTCCATCTCATCCTACGCGTCTTTTCTTAATGCTCACTTTGTCAAATTAAAAACAATATTTATTTGGTCATTAGTTCATCAGCCTTTGCTAACACTCCAAGCTTTAAACTACCGATCTAGATCAAAATATCAAACGTAAGTTTTGATAGAATGTTTATGTTGATAGATTTTTCAATTATTATTAATATAAAAGATCTACAAATTTACAAAAAAAAAAATGGCCATCCTTGTAAAATAGTTTTGAGCTTTGTTTATTAGGCGCCATTTCACATGGGTGATAGTTTATTAATATTTTTGTCATAGTGCATTGATTTATCTATGATATACTAGAAATCTCCATAAAAGAATGTCAAGTTGGGAATAAGTTGTTGACATGCAAATAAAGATTTAACACCAACCAAAGCAACCACTACCATCCAACTAACTTTATGTGAATGTCTAATTTTAAAATGTATTGTAATTAATATATATTTGAAGTTGTTTTTCTTTGTGATTCAAATTTTAAAAGTGATGGAAAAAAGTTTTTCTCCATAACCCTATCATCTTGCTTTCATTTACATTCATACAATATATTATAAATATTTATTTTCTTAAGAAAATTTACAGTTTTCTAATATTAATCTAGAGTAGTTTTATATTACATTTCTTTTAATGAAAAATCTATTTGTTGTTTACACTCAACCACACTTGTTATACTATTTGGTTTGAAAATCCCACAAAATCTTATGACATTATTAGTGATTTCTTTCCATTTTTAGAAAATTTCCTTTTCTAGTAATTTTAATTCCCTCTTAAACATATTTTCTTAGGACAAAAAAATATTTACAAATAGAGTACAATGCGTATGTCCATCATTGTCTACTCTCAATACATAATGATAATTGAATTTTTCCTTTCATTTCGCTGTATTAGAAACAAAACTGAATTTGATTTTATGAACACTACATCTACAAATATTGAATGAAATTTTCGATTATAGTCTTCCTTTAATTTGGAAACCAAAATAATTTCAGAATTTTTCAAAATATATTAAAAGTGCTCGACATTCAAACGTGGAACACGTGTCAAATGAAATTTGTTTCTATCCTTTGATGGCCTACGCCTAGCTGGCTCTTATCTTACTTTTCCCATAAGATCCGATTGTTGATCGCCAGATACTTGGAATTGGAAACTTTATGGTTTAAATATTGTTTTCATCTCCTACTTCTAGAATTCTTCAATTTTGATCGGTTCGTTCTTAGTCTGTTTTAACTTAAATTAATCTTAAATATCGTCCTTCAAAATTAACTTTTTTGTTTAAATTGACAAAATATTTTATGATAATTTTCTAGTGGATGCAAGTTAAGATATGAGTTTGTCTTGCAGATGTATAAGGAAAACATTTAATAGATAACAGACGTTTTTAAAATAATGAAAAAAAGTAAGATAAGATTAAATTTAAGATTTATTAAAAATAGAAATATTAGACATTTTTAAATACATGTGTATTATATAATTGAATAAATAAGGGTTTTTATATATATATATAAATAAAATAAAACTAATCCATATTTTGACAATTTTCTCAAATAATTTATCTTCTTTTGTATCTTTCTTTCAAAATATCTCTTCGTTGCCTTTACGGCATGGATGAGAAGACCATGATTCCCCTTCACGTTAGCTCTGTTTGATGAATTTTGGCTTTGAATCTCATCATCTCTATCCAACCTTTATCTGGGTCTAGTGGGATGGGATGATGTGATGTGCCTTCAATTATATATATACATTACAGTCTGATTGTTACTATTCTTGGCCTCTTCTCCAAGTTAATTGTGTCAGTAGTTTTCAATCAAAGTCTTTATTTAATAATGTTTCCAAAATACCATTTTCTTTGAGTTATTGTTTTTCTATTATTTTTATTATTATTAAACTACTGTTCTCTTTGAGTTAATGTTTATTTGATTTTAATTATTTATCATCCACTACTAGCTTAAAGAAATCCATAAATACTATCGGATTCAATTGTTAAAATGTAATTAATGTTTTTTTTAAACAAATAGTTGTGGGAGCAGGTAAGATTGTCAAATTTCCTATTCTCATTAAAAGAAAATACTATGGTTGTGTAGAAGAGTGAACCTCCCTATCTTGTGGTCATGGTAGGTTTGAGTTATGTTATTTTGATTGTTTATTGTGAACTTAACTGAATTATTATACAAATATTTGAAGTGTGTGGGTATATACATATCATCTCAATCATAACTTTATAAAAAAGTTAGATTTTTCGTTGCATTATAAAAATTAGATAATAACTTTAAGAAAATGATTCTTTTTTAATGAGAAAGCTAAATTATTAGTAGAATGAAAAAGCAGTATGTGGTGGGACTGTTCTTATCATTTATGTTAGTTGTTATTGCAAGCCAATCATATAATCGATTACTTTTTCTCGATAGCATATCTGATTCTCAAGCATGCTTTTGGGTTCTTCTTTTTATTCTTCTTTAAGTTGACCTTTTACCTACATCATATCTAATGATCAAATCATCCATACACTCAGTTTGAACAAGAGTAATTAATTATTGTAATATATATATATATTCGTGGATTCCATATTTTATACTTCGTTCGTAGGAATTTTTAAATTTAATTTTTATTTCATCCATGAATTTCAAGATCTTATATACTTCACCATTAAATTAGATCGATATGATGTTATATTTTCCTTATTTACAATTTTCCGATAGTGTTCTTAAATCTGAATTGTTCTCTTGCAATCGACCACTCTTTCTTCAATTTATATACTAAGTAAATCTTTGTGTTGATTCTTCACTGTTTATGTTTTTCAATTGATCTTTCTATGCTTAATGCCTTTACACTTTTAATGTTGAAATAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCCGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAGAGTCGTTACTTTTGGCCACAAAACATTAGTCAAGAAGTAGCAGCCCAAACTATATTTACGTTATTAAATAAAGAAGGTTTGTTTGTTTGTTTAAGTGTTTGGAGTCTTTGTGTTGTTTTGTAAAAGGTTAAAAAGCAAATGGTTATTATATAGTGTTTGTACCAAACTATATTACGTTGTTTGGATGTTTTTGTGCCCTTCTTTGACTATACAAAATAGTGTGCTTTTATAGCTCTATATTTCTTCTTCCAACTTGAAGCTTAATGGCTCCTTTTTTAAGTGATAATAATTTAAGGTAAAATATTACCTTCGGCCACTGAGTACTTTTAGTTTAACTTTCCTAACTCTTCCAAAATACAAGAAACTAAAATGAACTTAAATAGAAGTAAATTGAGTTAACCAAAATTGGAACAGTGTGAAGTGGAATATTTTGGGATGAGAAAGTTTGAAATTTAGATATAATGGAACATTGAAATGAGAAATCTAAGTTTGGAGGCCAAAAAGAATATAATAATCCTCCAGTATAAGACTTTATGGAGATTTTTTCGAGTCTCTTTTTTCGTTTCTGAAAAGGACATTTTTAAAAGGACTTTTTACGTATATTTCAAATGTTTCTTTTGTACTTTCTAAGTTTCTTTTGTACTTTCTAAGTTGAGTTTGGAAGATTTCAATTTGTTCTATGTTTCATAATGTTACCATTCTACTATTGAA

mRNA sequence

ATGGCCGCTAATTCGAGGAGCGTAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCTGCGATCCACTTCGTAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCCGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG

Coding sequence (CDS)

ATGGCCGCTAATTCGAGGAGCGTAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCTGCGATCCACTTCGTAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTACTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCCGCTGTGGAGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG

Protein sequence

MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL*
Homology
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BLAST of CsaV3_4G004470 vs. NCBI nr
Match: XP_004146886.1 (late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hypothetical protein Csa_014444 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 4.9e-69
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS
Sbjct: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR
Sbjct: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 134
           PTSLEDSEKPHGL
Sbjct: 121 PTSLEDSEKPHGL 133

[Close]
BLAST of CsaV3_4G004470 vs. NCBI nr
Match: XP_038901450.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 239.2 bits (609), Expect = 2.1e-59
Identity = 121/133 (90.98%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS G IAGLGKRITDQIWT DPLRNSVISSSAPK RRAAHTS YDKNP+EQVRPS
Sbjct: 1   MAANSRSAGVIAGLGKRITDQIWTSDPLRNSVISSSAPKIRRAAHTSAYDKNPDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           +VPDDVIQ Q AAD YWAPHPQTGVFGPASDNPA  AAAANRAADGGNYSAVEEEKAWFR
Sbjct: 61  VVPDDVIQSQ-AADKYWAPHPQTGVFGPASDNPA--AAAANRAADGGNYSAVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 134
           PTSLEDSEKPHGL
Sbjct: 121 PTSLEDSEKPHGL 130

[Close]
BLAST of CsaV3_4G004470 vs. NCBI nr
Match: XP_008453829.1 (PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 124/134 (92.54%), Postives = 124/134 (92.54%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWT-CDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60
           MAANSRS GAIAGLGKRITDQIWT  D LRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWF 120
           SIVPDDVIQPQ AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWF
Sbjct: 61  SIVPDDVIQPQ-AADKYWAPHPQTGVFGPTSDNPAAV-AAANRAADVGNYSAAEEEKAWF 120

Query: 121 RPTSLEDSEKPHGL 134
           RPTSLEDSEKPHGL
Sbjct: 121 RPTSLEDSEKPHGL 132

[Close]
BLAST of CsaV3_4G004470 vs. NCBI nr
Match: XP_023552006.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54
Identity = 114/133 (85.71%), Postives = 118/133 (88.72%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIW  DPLRNS ISS+APKFRRAAHTS YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNP-AAVAAAANRAADGGNYSAVEEEKAWF 120
           IVPDDVIQPQ +AD YWAPHPQTGVFGPA+ NP AAVAA AN  ADGGNYS VEEEKAWF
Sbjct: 61  IVPDDVIQPQ-SADKYWAPHPQTGVFGPATINPVAAVAAVANHTADGGNYSIVEEEKAWF 120

Query: 121 RPTSLEDSEKPHG 133
           RPTSLEDSEKPHG
Sbjct: 121 RPTSLEDSEKPHG 132

[Close]
BLAST of CsaV3_4G004470 vs. NCBI nr
Match: XP_022984594.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 221.1 bits (562), Expect = 5.8e-54
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIWT DPLRNS ISS+APKFRRAAHTS YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ +AD YWAPHPQTGVFGPA+ NP  +AA AN  ADGGNYS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQ-SADKYWAPHPQTGVFGPATINP--MAAVANHTADGGNYSIVEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 133
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 129

[Close]
BLAST of CsaV3_4G004470 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-19
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 42  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAAN 101
           R  HTS YDKN EE+++PS VPD++I+P   +D YW+PHPQTGVFGP+S      +  A 
Sbjct: 32  RNDHTSAYDKNVEEELQPSQVPDEMIKPD--SDKYWSPHPQTGVFGPSSS-----STNAK 91

Query: 102 RAADGGNYSAVEEEKAWFRPTSLEDSEKPH 132
               GG   +V EEKAWFRPTSLED +K H
Sbjct: 92  DEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]
BLAST of CsaV3_4G004470 vs. ExPASy TrEMBL
Match: A0A1S3BYE5 (uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.0e-59
Identity = 124/134 (92.54%), Postives = 124/134 (92.54%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWT-CDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60
           MAANSRS GAIAGLGKRITDQIWT  D LRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWF 120
           SIVPDDVIQPQ AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWF
Sbjct: 61  SIVPDDVIQPQ-AADKYWAPHPQTGVFGPTSDNPAAV-AAANRAADVGNYSAAEEEKAWF 120

Query: 121 RPTSLEDSEKPHGL 134
           RPTSLEDSEKPHGL
Sbjct: 121 RPTSLEDSEKPHGL 132

[Close]
BLAST of CsaV3_4G004470 vs. ExPASy TrEMBL
Match: A0A6J1JAZ8 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111482838 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIWT DPLRNS ISS+APKFRRAAHTS YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ +AD YWAPHPQTGVFGPA+ NP  +AA AN  ADGGNYS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQ-SADKYWAPHPQTGVFGPATINP--MAAVANHTADGGNYSIVEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 133
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 129

[Close]
BLAST of CsaV3_4G004470 vs. ExPASy TrEMBL
Match: A0A6J1CHE9 (late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=3673 GN=LOC111011456 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.6e-52
Identity = 109/132 (82.58%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGLGKRIT+QIWT DPLRNS ISSSAPKFRRAAHTSVYDKNP+EQ RPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPD+VIQPQ   D YWAPHPQTGVFGP +D+P A AA   +AA+GG+Y AVEEEKAWFR
Sbjct: 61  IVPDEVIQPQ--PDKYWAPHPQTGVFGPVTDHPTAAAA---KAANGGSY-AVEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 133
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 126

[Close]
BLAST of CsaV3_4G004470 vs. ExPASy TrEMBL
Match: A0A6J1E3E9 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111430463 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52
Identity = 109/132 (82.58%), Postives = 116/132 (87.88%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGL KRITDQIW  DPLRNS ISS+APKFRRAAH+S YDKN +EQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHSSTYDKNHDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ +AD YWAP+PQTGVFGPA+ NP  VAA AN  A+GGNYS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQ-SADKYWAPNPQTGVFGPATINP--VAAVANHTANGGNYSIVEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 133
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 129

[Close]
BLAST of CsaV3_4G004470 vs. ExPASy TrEMBL
Match: A0A6J1FNH5 (late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447057 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 106/132 (80.30%), Postives = 113/132 (85.61%), Query Frame = 0 

Query: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60
           MAANSRS GAIAGLGKRIT+QIWT D    S ISSSA KFRRAAHTS YDKNP+EQVRPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPS 60

Query: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120
           IVPDDVIQPQ AA+ YWAPHP TGVFGP +D P   AAA +RAADGGN++A EEEKAWFR
Sbjct: 61  IVPDDVIQPQ-AAEKYWAPHPHTGVFGPEADQP--TAAAGSRAADGGNHAAAEEEKAWFR 120

Query: 121 PTSLEDSEKPHG 133
           PTSLEDSEKPHG
Sbjct: 121 PTSLEDSEKPHG 125

[Close]
BLAST of CsaV3_4G004470 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-20
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 42  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAAN 101
           R  HTS YDKN EE+++PS VPD++I+P   +D YW+PHPQTGVFGP+S      +  A 
Sbjct: 32  RNDHTSAYDKNVEEELQPSQVPDEMIKPD--SDKYWSPHPQTGVFGPSSS-----STNAK 91

Query: 102 RAADGGNYSAVEEEKAWFRPTSLEDSEKPH 132
               GG   +V EEKAWFRPTSLED +K H
Sbjct: 92  DEFRGGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]
BLAST of CsaV3_4G004470 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-20
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 0 

Query: 41  RRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAA 100
           RR+ H+S YDKN E+++  S VPD+VI+P   +D YW+PHP+TGVFGP++   +A A  A
Sbjct: 37  RRSGHSSAYDKNVEDELHASAVPDEVIKPD--SDKYWSPHPKTGVFGPSTTEHSATAEGA 96

Query: 101 NRAADGGNYSAVEEEKAWFRPTSLEDSEKPH 132
           ++       +AV EE AWFRPTSLEDS+K H
Sbjct: 97  HQD------TAVLEETAWFRPTSLEDSDKTH 119

The following BLAST results are available for this feature:
BLAST of CsaV3_4G004470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146886.14.9e-69100.00late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hy... [more]
XP_038901450.12.1e-5990.98late embryogenesis abundant protein At5g17165-like [Benincasa hispida][more]
XP_008453829.11.0e-5892.54PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo][more]
XP_023552006.11.5e-5485.71late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo][more]
XP_022984594.15.8e-5484.85late embryogenesis abundant protein At5g17165-like [Cucurbita maxima][more]
BLAST of CsaV3_4G004470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4KFM82.8e-1955.56Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of CsaV3_4G004470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYE55.0e-5992.54uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=... [more]
A0A6J1JAZ82.8e-5484.85late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1CHE92.6e-5282.58late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=367... [more]
A0A6J1E3E93.4e-5282.58late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1FNH52.7e-4980.30late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita mosch... [more]
BLAST of CsaV3_4G004470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17165.12.0e-2055.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G03150.14.5e-2052.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039291Late embryogenesis abundant protein At5g17165-likePANTHERPTHR35122OSJNBA0093F12.14 PROTEINcoord: 1..131
NoneNo IPR availablePANTHERPTHR35122:SF2OSJNBA0093F12.14 PROTEINcoord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G004470.1CsaV3_4G004470.1mRNA