CsaV3_4G003970 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTATATTTCTTCTTATATATAAGCCACTGAAATCAAGCTTGGTGCTCCACACAGCGCTATGGCTTCTAGTAATGCTCTATGCAAACTAATAATGCTCATCTTAGTTACCATCCTCTTTGCCTCCAATAATTTTGCCACAAGGAACTTGCTTTCTATGCCTCATCTCGCTCGTAAGTTACTCTCTTGTATCACATTGAATCTTAATGTTTAAATCTGATGTTTTTTCAGTCAGATTGAAATTATTTTTAGAGTGTACTTAAAAGTCATTTTAAAATATACTACAAGAAATTTGGAAATACATACTATGTATATAGAATCTAAATCAATTCATATATATTGAAAATGAGAACTAAACACTTAAAAGGGTGATAACTACTTTAATTTTTAATTTTCTGTTTTTGAAATAATTTTTCAAACTTTTCTTAATTTTCTAACTGTGCGAAAAATATTTGAATACTTAATTAAATTTCACAATATGGAAAAAAGTACTTGCTACTTAAGATTTTATACAAATTATAATAAGAAAAAAAATAGACTTAATAAAAATTCAAAAGATGAAATGGTTATCAAACAAGATCAATATAATTGAAAAAGGTAACGTAAAGAAATTGTGGTTGATTTTGATCAGATGTAAATCATGATGAGATGACCAATTCTCCACCAACACCACCAAAAGATGGACCATGGGGTGGAAACGTTTGAGGATAACACTGCCTTTCTTTCTTTTCTTTTGTTTTAACTAGACGTTTCCATAACTTGTTATTTCCATACATCTAAAATAAGAAATGAACTTGAGTGTAGTTGGGATGAACAATATTATCTTCTTTCGAAATATGTATTTGTATGGTCAAAAGGTGGAAAGCATAGTGGTTCGATGCAAGTTAGGTTGGTTGTACTTGATCGTGGCTTGTTGAATGAAAATTTAAACTTTCAATCTTGTGGATAAATATGAATATACTTTTAATTGTTGTTAGTTCATGACGTG ATGGCTTCTAGTAATGCTCTATGCAAACTAATAATGCTCATCTTAGTTACCATCCTCTTTGCCTCCAATAATTTTGCCACAAGGAACTTGCTTTCTATGCCTCATCTCGCTCATGTAAATCATGATGAGATGACCAATTCTCCACCAACACCACCAAAAGATGGACCATGGGGTGGAAACGTTTGA ATGGCTTCTAGTAATGCTCTATGCAAACTAATAATGCTCATCTTAGTTACCATCCTCTTTGCCTCCAATAATTTTGCCACAAGGAACTTGCTTTCTATGCCTCATCTCGCTCATGTAAATCATGATGAGATGACCAATTCTCCACCAACACCACCAAAAGATGGACCATGGGGTGGAAACGTTTGA MASSNALCKLIMLILVTILFASNNFATRNLLSMPHLAHVNHDEMTNSPPTPPKDGPWGGNV* Homology
BLAST of CsaV3_4G003970 vs. NCBI nr
Match: KAE8649132.1 (hypothetical protein Csa_015133 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 3.4e-25 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003970 vs. NCBI nr
Match: KAA0044642.1 (hypothetical protein E6C27_scaffold46G003970 [Cucumis melo var. makuwa] >TYK16946.1 hypothetical protein E5676_scaffold130G00830 [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 2.7e-14 Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of CsaV3_4G003970 vs. NCBI nr
Match: KAE8649133.1 (hypothetical protein Csa_014439, partial [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 5.1e-13 Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 0
BLAST of CsaV3_4G003970 vs. NCBI nr
Match: KAG6600182.1 (hypothetical protein SDJN03_05415, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 54.3 bits (129), Expect = 4.3e-04 Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of CsaV3_4G003970 vs. ExPASy TrEMBL
Match: A0A5A7TMV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00830 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.3e-14 Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of CsaV3_4G003970 vs. ExPASy TrEMBL
Match: A0A0A0KZ52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022280 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.5e-13 Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|