CsaV3_4G003410 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G003410
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 2065672 .. 2065912 (-)
RNA-Seq ExpressionCsaV3_4G003410
SyntenyCsaV3_4G003410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGCAATGAAGTGTCATTGGTCAAAGCCATCTTTGCCCTGCGTCTTTGAGCTCCACCCTCAATCTTCTTCTCTCATTTTCATCACTGTTCGCGCCTCCTCCCAGCCGCCCTTTCATCCAAATCGCAGAGATTCATCCATTGTAAAGTTTCTTACATCTCTCTTCTACCTTCAATTCATCCACTCTCTCTTTTCTCTTGTTCTCAACTATGGCGCAGTTGCAGTGTGTTGTTTAA

mRNA sequence

ATGGAAGACGCAATGAAGTGTCATTGGTCAAAGCCATCTTTGCCCTGCGTCTTTGAGCTCCACCCTCAATCTTCTTCTCTCATTTTCATCACTGTTCGCGCCTCCTCCCAGCCGCCCTTTCATCCAAATCGCAGAGATTCATCCATTTTGCAGTGTGTTGTTTAA

Coding sequence (CDS)

ATGGAAGACGCAATGAAGTGTCATTGGTCAAAGCCATCTTTGCCCTGCGTCTTTGAGCTCCACCCTCAATCTTCTTCTCTCATTTTCATCACTGTTCGCGCCTCCTCCCAGCCGCCCTTTCATCCAAATCGCAGAGATTCATCCATTTTGCAGTGTGTTGTTTAA

Protein sequence

MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV*
Homology
[Close]
BLAST of CsaV3_4G003410 vs. NCBI nr
Match: KGN53086.1 (hypothetical protein Csa_014910 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV 55
          MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV
Sbjct: 1  MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV 54

[Close]
BLAST of CsaV3_4G003410 vs. ExPASy TrEMBL
Match: A0A0A0KZ09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015760 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV 55
          MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV
Sbjct: 1  MEDAMKCHWSKPSLPCVFELHPQSSSLIFITVRASSQPPFHPNRRDSSILQCVV 54

The following BLAST results are available for this feature:
BLAST of CsaV3_4G003410 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53086.15.7e-24100.00hypothetical protein Csa_014910 [Cucumis sativus][more]
BLAST of CsaV3_4G003410 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G003410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ092.8e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015760 PE=4 SV=1[more]
BLAST of CsaV3_4G003410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G003410.1CsaV3_4G003410.1mRNA