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CsaV3_4G003240 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTCTTCTCTTCATACTCCGACCAGTCCATATAATTTTGATCAAAATTCAGTTGCATTGAGCCCGAGTATAGATGATAATCATGAGATGTCATTGGGGTTGGAGTTTTCTTCATGTAATTGGATAAATAATGTAGGGTCGGAGCAACTACCAACGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATAGTTTATCATTAACAAATCCCAACGGTAACTTTGAAACTACACAATATTACCCTTCTTTCCCTCAATTTAATGTTCTCAATGATAATTTTGAAACTCCACAATTTTACCATCCTGCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAACCCATAACTCATCTAATGATTCTATTAGATATAACAATGGTTTTCTCTCTGACGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCTGACATCCCTACCCAAATGATTAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACAACCGCTATTGTCGCAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAGTACGTATACAACAATACAAATATAATATATGCAACTCATCTAAGTTATTTACTGATACATACATATTATTGCAGATTATTTCTAGCGGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGATTACAAAAACACACACACAAGTGGCTAGTCATGCACAAAAGTATTTTCTTCGTCAGACCTCACCAAAGCATAAGAGAACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTTTAGCGGAAGCACGTATAGCGCAACACATGAAGCGTCTCAACAACAAGGATCAATGA ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTCTTCTCTTCATACTCCGACCAGTCCATATAATTTTGATCAAAATTCAGTTGCATTGAGCCCGAGTATAGATGATAATCATGAGATGTCATTGGGGTTGGAGTTTTCTTCATGTAATTGGATAAATAATGTAGGGTCGGAGCAACTACCAACGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATAGTTTATCATTAACAAATCCCAACGGTAACTTTGAAACTACACAATATTACCCTTCTTTCCCTCAATTTAATGTTCTCAATGATAATTTTGAAACTCCACAATTTTACCATCCTGCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAACCCATAACTCATCTAATGATTCTATTAGATATAACAATGGTTTTCTCTCTGACGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCTGACATCCCTACCCAAATGATTAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACAACCGCTATTGTCGCAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAATTATTTCTAGCGGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGATTACAAAAACACACACACAAGTGGCTAGTCATGCACAAAAGTATTTTCTTCGTCAGACCTCACCAAAGCATAAGAGAACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTTTAGCGGAAGCACGTATAGCGCAACACATGAAGCGTCTCAACAACAAGGATCAATGA ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTCTTCTCTTCATACTCCGACCAGTCCATATAATTTTGATCAAAATTCAGTTGCATTGAGCCCGAGTATAGATGATAATCATGAGATGTCATTGGGGTTGGAGTTTTCTTCATGTAATTGGATAAATAATGTAGGGTCGGAGCAACTACCAACGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATAGTTTATCATTAACAAATCCCAACGGTAACTTTGAAACTACACAATATTACCCTTCTTTCCCTCAATTTAATGTTCTCAATGATAATTTTGAAACTCCACAATTTTACCATCCTGCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAACCCATAACTCATCTAATGATTCTATTAGATATAACAATGGTTTTCTCTCTGACGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCTGACATCCCTACCCAAATGATTAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACAACCGCTATTGTCGCAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAATTATTTCTAGCGGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGATTACAAAAACACACACACAAGTGGCTAGTCATGCACAAAAGTATTTTCTTCGTCAGACCTCACCAAAGCATAAGAGAACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTTTAGCGGAAGCACGTATAGCGCAACACATGAAGCGTCTCAACAACAAGGATCAATGA MAENKNVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGLEFSSCNWINNVGSEQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYPSFPQFNVLNDNFETPQFYHPAYTQFNDPNNNYNNMGDAFLCSPSTLSTTHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVITKTHTQVASHAQKYFLRQTSPKHKRTSIHDITTAEPEFFALAEARIAQHMKRLNNKDQ* Homology
BLAST of CsaV3_4G003240 vs. NCBI nr
Match: XP_011654326.2 (myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_015417 [Cucumis sativus]) HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. NCBI nr
Match: KGN53075.1 (hypothetical protein Csa_014760 [Cucumis sativus]) HSP 1 Score: 662.5 bits (1708), Expect = 2.0e-186 Identity = 332/357 (93.00%), Postives = 339/357 (94.96%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. NCBI nr
Match: KAA0044592.1 (myb-like protein J [Cucumis melo var. makuwa]) HSP 1 Score: 312.8 bits (800), Expect = 3.9e-81 Identity = 208/370 (56.22%), Postives = 244/370 (65.95%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. NCBI nr
Match: XP_008454484.1 (PREDICTED: myb-like protein J [Cucumis melo]) HSP 1 Score: 287.3 bits (734), Expect = 1.8e-73 Identity = 174/286 (60.84%), Postives = 206/286 (72.03%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. NCBI nr
Match: TYK16992.1 (myb-like protein J [Cucumis melo var. makuwa]) HSP 1 Score: 152.9 bits (385), Expect = 5.2e-33 Identity = 83/129 (64.34%), Postives = 98/129 (75.97%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.8e-13 Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.1e-12 Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.9e-12 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.9e-12 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.2e-11 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy TrEMBL
Match: A0A0A0KYZ4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G014580 PE=4 SV=1) HSP 1 Score: 712.6 bits (1838), Expect = 8.2e-202 Identity = 355/357 (99.44%), Postives = 356/357 (99.72%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy TrEMBL
Match: A0A0A0KTY5 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015160 PE=4 SV=1) HSP 1 Score: 662.5 bits (1708), Expect = 9.8e-187 Identity = 332/357 (93.00%), Postives = 339/357 (94.96%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy TrEMBL
Match: A0A5A7TMR3 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003420 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81 Identity = 208/370 (56.22%), Postives = 244/370 (65.95%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy TrEMBL
Match: A0A1S3BZH7 (myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 8.5e-74 Identity = 174/286 (60.84%), Postives = 206/286 (72.03%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. ExPASy TrEMBL
Match: A0A5D3CZL0 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001340 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.5e-33 Identity = 83/129 (64.34%), Postives = 98/129 (75.97%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 3.3e-17 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator ) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-14 Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 7.5e-14 Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. TAIR 10
Match: AT1G74840.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 7.5e-14 Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CsaV3_4G003240 vs. TAIR 10
Match: AT3G10580.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 9.8e-14 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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