CsaV3_4G002980 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G002980
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 1846646 .. 1847019 (+)
RNA-Seq ExpressionCsaV3_4G002980
SyntenyCsaV3_4G002980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTATATTCTGTGTTCATTGGTGAACCATTGTCTAATCTACCATGGATATCTCCAATCTTCCCTTGGGTTGCTGATATGACAGAATGGACGGTTGATTTGGTTGACTAAACAAAATTGGATGTTTTAAATGTGAACTTAGTCTGTGCTTTTAATTTTGGTTTTTATACTTTTAAAAGGTTGGTTTGTGGGATACTTAGTACTTTTCATCTTCTATTTCAATATTGATTCAATGTGTTTTAGAGACGGACCGTGTTGGTCAGAGAGAGATCTATGGGTTCGATTTTTCTTTTGAAAAAACTGGTTACGGCTGGATTCAAGGAAAACTGATCGATATTCTTCAATTTGGTCGGTTTTGGTTGTTGACTTAG

mRNA sequence

ATGACATTATATTCTGTGTTCATTGGTGAACCATTGTCTAATCTACCATGGATATCTCCAATCTTCCCTTGGGTTGCTGATATGACAGAATGGACGGTTGATTTGTACTTTTCATCTTCTATTTCAATATTGATTCAATGTGTTTTAGAGACGGACCGTGTTGGTCAGAGAGAGATCTATGGGTTCGATTTTTCTTTTGAAAAAACTGGTTACGGCTGGATTCAAGGAAAACTGATCGATATTCTTCAATTTGGTCGGTTTTGGTTGTTGACTTAG

Coding sequence (CDS)

ATGACATTATATTCTGTGTTCATTGGTGAACCATTGTCTAATCTACCATGGATATCTCCAATCTTCCCTTGGGTTGCTGATATGACAGAATGGACGGTTGATTTGTACTTTTCATCTTCTATTTCAATATTGATTCAATGTGTTTTAGAGACGGACCGTGTTGGTCAGAGAGAGATCTATGGGTTCGATTTTTCTTTTGAAAAAACTGGTTACGGCTGGATTCAAGGAAAACTGATCGATATTCTTCAATTTGGTCGGTTTTGGTTGTTGACTTAG

Protein sequence

MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIYGFDFSFEKTGYGWIQGKLIDILQFGRFWLLT*
Homology
[Close]
BLAST of CsaV3_4G002980 vs. NCBI nr
Match: KGN53039.1 (hypothetical protein Csa_015330 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 1.8e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIY 60
          MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIY
Sbjct: 1  MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIY 60

Query: 61 GFDFSFEKTGYGWIQGKLIDILQFGRFWLLT 92
          GFDFSFEKTGYGWIQGKLIDILQFGRFWLLT
Sbjct: 61 GFDFSFEKTGYGWIQGKLIDILQFGRFWLLT 91

[Close]
BLAST of CsaV3_4G002980 vs. ExPASy TrEMBL
Match: A0A0A0KW17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011860 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 8.7e-47
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIY 60
          MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIY
Sbjct: 1  MTLYSVFIGEPLSNLPWISPIFPWVADMTEWTVDLYFSSSISILIQCVLETDRVGQREIY 60

Query: 61 GFDFSFEKTGYGWIQGKLIDILQFGRFWLLT 92
          GFDFSFEKTGYGWIQGKLIDILQFGRFWLLT
Sbjct: 61 GFDFSFEKTGYGWIQGKLIDILQFGRFWLLT 91

The following BLAST results are available for this feature:
BLAST of CsaV3_4G002980 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53039.11.8e-46100.00hypothetical protein Csa_015330 [Cucumis sativus][more]
BLAST of CsaV3_4G002980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G002980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW178.7e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011860 PE=4 SV=1[more]
BLAST of CsaV3_4G002980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G002980.1CsaV3_4G002980.1mRNA