CsaV3_4G002820 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G002820
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description54S ribosomal protein L51, mitochondrial
Locationchr4: 1756257 .. 1759668 (-)
RNA-Seq ExpressionCsaV3_4G002820
SyntenyCsaV3_4G002820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGGTCTTCTTCCCTATAACCAACCCCCTACCCCTGCACGCATTTCCTGACCCCCGCCCTTTCACCCTGCCGGCGAAATCGCCGCCGCCCTATATCACACTCTCTCGTCACTTTCAGTAATCAGAGCTACTTGTCGCTATTTATTTTTTCTACTCAGAAACACAGTGGTCGTACCCTTACCCTCGCCGTTGGTGAGATCACTCAACTGCCGCTCGTTTTTCAGATCCCAAGGTTTTATTTTTTTAATTTTTGTTTCTTCGGGTTATGTTGGTTTATTATGTTCACCCACGGAGAAGAAAATCAAGAACAACTTTTGTTTTTGTTGATTTCTTTTGCATACAATGATCAACTAGTCAGCATGAAAACTAAGAATGTATACCTTACAAGATACAAAATAATAATAATAATTAAAGAGGAAATAATTAGGCTTTCTTCTTGAATATATTAGAAACTATCAATACCTATGAACTAGAGCATAGTAGGGGGTGAGCCTTTGCTTATGAACTAGCCAGGCATTATAGATGGTTTTCCAAACTTTTTGCAGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTATTGTGATTGGGGAGGAAGCAGCAGAGGCATCAGGTTTGTTGGATTGCTAAACTATTGCCTATTAGATTACTTCAATACTGAGAATTCGGTTTTTAACTGATGGAAGTTTAAGTTTTAATCTGGAAGTCTTCGTATGTCCATTTTCCAGCATAATTACCTTACTCATCTTAATGAGTATTGAGTTGGGTAGAAGTAGGAGATATTGGAAATGTCTTGCTTTTAGAAATGAGTTATTCAGAAGGGTTCTTGAAGTGTGGCGAGGCACATCCTTTTTTTTCACAGACCGTCCCCTCTATGCCTACCAAGCTTACAAAATGACCTTATCTTTTCTTTTACCTAACCCAAACATGGAATGTCCGCGTGTCATCTCTTTAAAATAATTGTCAATGTTTAGTAATGCTAGTGATGTTTGAGGAAATTGAACCACACCATATGGTTCTTTAAAATAATAGGCTCAAAATCAGAATCAAAACACCATATCAATTGGAATTGTAGTTTAACTTATGTTTATTCTCTCTAATGTAACACGTTCTGGTTTCTAAGTTTAAGCCTAAGTTTAATTTATATTGCTTGACTTGATTCTTAATAACCAACAGCGTAGATATTATATAGATTATACTGTATAAGTTGCTTTTGTGGAAGCAAACTGGAAAGATTTTTTCTCACACATCAGTTTAGTATCAAATTGTACAGCCTCCATAGGAGGTCTCTTGTCAGTTGTCGCATGTATGCTTGGATTCACTTATTCCAAGTTATGTTCTTTTGAGTGTGTTGTTGGGAAAACTATAGAATAGATAGCAGACCTATGCAAATCATATCCTCAATCTTGCATATATATCAAATAGATACATGTCTACTAGCGCTTGCGTCATAGCTATGTAGGTTCTGATAAAGTGCATTTATCTGCCCAGGGAATGAGAATTCCTTTAGGAATCTCTGATTTTTTAATTTATGTTCATCTTTGAAGCCTAATAATCAAACATGTGAAAAGTTCCATGTTTTGAGTGGAGGCTTGCCAAGTTGACTTCCTGGGCCTCTTTGGTGGGGTGTGAAGTCAGTCAGCTTCTTGAATCCTTTCCTTGGTCCTCCTTTGGGAGATGTCTCGAGATCCGTGTGTTTCTGGAACCATTGGTGGGGAAAGTACAGAGAAATTGTTGTCATCGTGGAAATAAGTTTTTTCTCTGGAGGGGGAAGATTAATCTTGATTCAATGTGTTTAGTAGAACTTCTATATAGTACGTCTTTCTTAGCACCTCACCGTTTTTACTGGGTCTCAGGCATTGAGTTGAAGGGTTATTGTAAGAATTTCGGGTCTGCTATTGCGTTGGGATTTCTTATGTTCTCTCAGTTCATTCAGTGTTCCATTGGGGATGGTCGAACACAAACTTTTGGGACGATTTCTAGGTGAATGAGAGACCCCTTTGTGCCTGGTTTCTTCAGCTTTATTCTTTTGGATTTTGACTTTGTAACTGGGTTTTTTTCCCTTTTCTTCTTGTTCTTGAGCTTGTTTTTTGTTTGCTCTTCTATATCCTTTTATCTATTTCAATGAAAGTTTGGTTTCTTCTAAAAAAAATAAAAATAGAAACTTTCCTTCATCCCTTTCCTGTGATATAAAGCCAAGCCTTCTCTGCCCGCCCTTTCGCTGGATGAGACCCGGTTTTTAGGCCAGTCATAAATCACCGGTCAACTTATCAGTGCTTCAAATCGTCTTGCTACTATCATATGGATCAAAACCGCACAAGCGGCCTGAACATTTTTCTTGATATAGAATATACTCGCCACTCGGTTATTGCTAGTCCTCGTGTAGCTTTGATAGTGAAACACATTTTCCTGAATGATTTGTATGTCATCATTGAATTTGCAGAGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGCCAGCATCCACACTTGAAGGGATTCTTCAGTAATTCCCTTTCCCTCTCAACTTTTGGTTGTTCATAGTAATAATAATTTACAAAGCGTTTTACGTTTGGTTTTTACCCGGATTCTTTATCTTTCACAGGAAGCAATAACAACCGAGTGGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAATGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACCAAAAATCCCAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGAGGGCTGGATGGATAATTTAATCATTCCTGAAGAGCTTGATTTCATTTAGAGAATGTTTCTTCCATCAATAATAAGATGTTGAAACCAAACTTCTTTATAGAATTGCTTGAGTTTTTGTTGTTTGTAGCAAGTCCTTATGTAACTTTTGAGGTAGTTATTATTTCCCCGGTTCTCTGAACACTTCCGGAAGGTTTTGGATAAAAACATTTTGTTCGTCTTGAAGGATATATGAAACAGAATGGGGTTCTAATTTGAATTGGTAACTTCTAATTCTAAACATTCAAAGCTGCCAACAAGAATTGAAATATTCATCAGACGAGAACACCCC

mRNA sequence

ATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTATTGTGATTGGGGAGGAAGCAGCAGAGGCATCAGAGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGCCAGCATCCACACTTGAAGGGATTCTTCAGAAGCAATAACAACCGAGTGGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAATGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACCAAAAATCCCAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA

Coding sequence (CDS)

ATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTATTGTGATTGGGGAGGAAGCAGCAGAGGCATCAGAGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGCCAGCATCCACACTTGAAGGGATTCTTCAGAAGCAATAACAACCGAGTGGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAATGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACCAAAAATCCCAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA

Protein sequence

MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF*
Homology
[Close]
BLAST of CsaV3_4G002820 vs. NCBI nr
Match: XP_004152128.1 (54S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S ribosomal protein L51, mitochondrial [Cucumis sativus] >KGN53023.1 hypothetical protein Csa_015078 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 7.2e-64
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. NCBI nr
Match: XP_038877046.1 (54S ribosomal protein L51, mitochondrial [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.0e-61
Identity = 113/119 (94.96%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNNNRVVCVKNMDPEEIH CAMRLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. NCBI nr
Match: XP_008454040.1 (PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041.1 PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 5.7e-61
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. NCBI nr
Match: XP_022979453.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 228.4 bits (581), Expect = 3.3e-56
Identity = 101/119 (84.87%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFM+S++PAF+EKNPQL++VTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNN+RV+CVKNMDPE+IH  A RLRN+LGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. NCBI nr
Match: XP_022158383.1 (54S ribosomal protein L51, mitochondrial [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 5.6e-56
Identity = 103/119 (86.55%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F+++NN RVVCVKN+DPEEI+  A+RLRN+LGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy Swiss-Prot
Match: Q9UUC8 (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-12
Identity = 29/105 (27.62%), Postives = 62/105 (59.05%), Query Frame = 0 

Query: 10  KKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFRSNNNRV 69
           +++  SYC+WGGSS+G++ F+ +++ +  +++  +E      +G+HP ++ ++ +   +V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 70  VCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +C + M    I   A+  R+S G K   ++    + NPSV+G W+
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy Swiss-Prot
Match: Q758S3 (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 0 

Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNPQLEVVTELIRGQHPHLKGFFRS 65
           ++  KK+ + YC+WGGSS+G+R F+ S ++  + EK PQ++    + +  HP LK  + +
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEV-VAKAGHPVLKAEYIN 79

Query: 66  NNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTK-------NPSVQGTWN 115
             N+ +CV+N++ + +      LR S G ++     RH  K       N SV+G W+
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy Swiss-Prot
Match: Q06090 (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.3e-09
Identity = 33/115 (28.70%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNP--QLEVVTELIRGQHPHLKGFF 65
           V+  +K+ + +C+WGGSS G+R F+ S ++  + ++ P  Q EV+    +  HP L+  +
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEVMR---KSGHPLLRAEY 79

Query: 66  RSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRH---VTKNPSVQGTWN 115
            +   +V+CV+N++ + + +    L++S G  +++ RT++    + N SV+G W+
Sbjct: 80  TNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy Swiss-Prot
Match: Q99N89 (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-08
Identity = 35/110 (31.82%), Postives = 53/110 (48.18%), Query Frame = 0 

Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFR 63
           R V QL++L +S      SSRG R F+E ++  F  +NP + V         P +   + 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTW 114
           +   R   V +   EEI S   +L +  G  V+++R    T NPS+QG W
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy Swiss-Prot
Match: Q8N983 (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-07
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0 

Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFR 63
           R V QL++L  S    G SSRG R F+E ++  F  +NP + +         P +   + 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +   R   +     EEI +   +L +  G  V+++R    T NPS+QG W+
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWH 131

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy TrEMBL
Match: A0A0A0KU37 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011700 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.5e-64
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy TrEMBL
Match: A0A1S3BXU0 (54S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.8e-61
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy TrEMBL
Match: A0A6J1IW90 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479166 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 101/119 (84.87%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFM+S++PAF+EKNPQL++VTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNN+RV+CVKNMDPE+IH  A RLRN+LGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy TrEMBL
Match: A0A6J1DVX7 (54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024881 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.7e-56
Identity = 103/119 (86.55%), Postives = 115/119 (96.64%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F+++NN RVVCVKN+DPEEI+  A+RLRN+LGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]
BLAST of CsaV3_4G002820 vs. ExPASy TrEMBL
Match: A0A5A7TSM4 (54S ribosomal protein L51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001760 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.7e-55
Identity = 105/110 (95.45%), Postives = 108/110 (98.18%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQ 111
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQ
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ 110

[Close]
BLAST of CsaV3_4G002820 vs. TAIR 10
Match: AT3G59650.1 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 210.7 bits (535), Expect = 6.5e-55
Identity = 98/119 (82.35%), Postives = 108/119 (90.76%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEV+TEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
            +R+ N RVVCVKNMDPEE+   A RLRNSLGRKVVKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

[Close]
BLAST of CsaV3_4G002820 vs. TAIR 10
Match: AT3G59650.2 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 194.5 bits (493), Expect = 4.9e-50
Identity = 98/146 (67.12%), Postives = 107/146 (73.29%), Query Frame = 0 

Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEV+TEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  ---------------------------FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGR 120
                                      F  + N RVVCVKNMDPEE+   A RLRNSLGR
Sbjct: 61  IYSMYISPLLNTILIQRLLILAISLAQFIGNRNERVVCVKNMDPEEVLLNATRLRNSLGR 120

The following BLAST results are available for this feature:
BLAST of CsaV3_4G002820 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152128.17.2e-64100.0054S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S r... [more]
XP_038877046.12.0e-6194.9654S ribosomal protein L51, mitochondrial [Benincasa hispida][more]
XP_008454040.15.7e-6195.80PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041... [more]
XP_022979453.13.3e-5684.8754S ribosomal protein L51, mitochondrial-like [Cucurbita maxima][more]
XP_022158383.15.6e-5686.5554S ribosomal protein L51, mitochondrial [Momordica charantia][more]
BLAST of CsaV3_4G002820 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9UUC81.0e-1227.6254S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
Q758S31.5e-1131.6254S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /... [more]
Q060905.3e-0928.7054S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
Q99N897.6e-0831.8239S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1... [more]
Q8N9833.8e-0729.7339S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 ... [more]
BLAST of CsaV3_4G002820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU373.5e-64100.00L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0117... [more]
A0A1S3BXU02.8e-6195.8054S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585... [more]
A0A6J1IW901.6e-5684.8754S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1DVX72.7e-5686.5554S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A5A7TSM48.7e-5595.4554S ribosomal protein L51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
BLAST of CsaV3_4G002820 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59650.16.5e-5582.35mitochondrial ribosomal protein L51/S25/CI-B8 family protein [more]
AT3G59650.24.9e-5067.12mitochondrial ribosomal protein L51/S25/CI-B8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..91
e-value: 1.0E-14
score: 64.9
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..76
e-value: 2.4E-8
score: 33.8
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..118
e-value: 1.1E-42
score: 147.3
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..117
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G002820.1CsaV3_4G002820.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032543 mitochondrial translation
molecular_function GO:0003735 structural constituent of ribosome