CsaV3_4G002430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G002430
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionRNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
Locationchr4: 1466300 .. 1477256 (-)
RNA-Seq ExpressionCsaV3_4G002430
SyntenyCsaV3_4G002430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGAACCGAACTGCAAAATTTTAGAAACATTTTTCCAACTTTTCCCTCTCCTCACGATTTCGCGTCGTTGTATTCTCCCGCGGCGAGCGGCGATCGGCACGGCGGCTGTTCCCTTGGTGTAAAGTCCGTTCACTGCCAGCATCCATTTACACTAGGTTTGATGGCTCATCTTCCGAGTCCTGTTTTTTTCTCTCTCTCGCTCTGTTGAAATTTCTCTGAATTTCACTGGCACGTTTTTCTCTTGAGCCGCCATATGCGAAGTCTTTATTATCAACTTCTGCTGTTACTTACGTCATTTCCTTCTTGTCTCGGTGCAGATTATCGGTCTGCTCGAACGATTCGAGTAAAGAACTTGTAGGTTTGTTTTGGTGCTTTGTCTTAGATGTTCTGAATACGCTCTTGGAATTCTGTGTATGTTGTAACATACAAATTACAAGTTCATGGAGTTGTATGAGAGTATATATATGTGTTTTCTTTTCTAGTTTAAATGGAACAGAGCTACGTGGATAGAAATTAGCTCATTTGTTAATGGTGCTTATCTTTGTTGTTCGACTGTTTTATATAATGTTGAGACGTTTAAGGTTTATCCAGCACTGATGCATGTTAAATTTTCATTTCACGTACAGGAAAGTGAAGTGATATTGAGGGATTTTCTCAATGGCAAAGAATCAATCTGTTTTGATTAAAGATACAGTATATAAATTGCAACTTGCACTTTATGAGGGCATTAAAAATGAGAATCAGCTATTTGCAGCTGGGTCTCTGATGTCTCGGAGTGACTACGAAGATGTGGTGACTGAGCGGTCTATTGCAGACCTCTGTGGATATCCATTATGCCATTCTAATTTGCCATCTGATAACACTAGGAGAGGCCGGTACAGAATTTCATTGAAAGAACATAAGGTGTATGATTTAGAAGAGACATATAAGTACTGCTCTTCCGCTTGCCTCATTAACAGCCGTGCCTTTTCTGGGAGATTGCAAGATGAGAGATGTTCGGTTATGAACCCAGATAAACTTAAAGAAATTCTTAAGCTGTTTGAGAATATGAGTTTGGATTCTAAGGAAAATATGGGGAATAATTGTGATTCGGGACTTGAAATTCAGGAGAAAATAGAAAGCAATATTGGAGAAGTTCCCATTGAAGAGTGGATGGGTCCATCAAATGCAATTGAAGGTTATGTGCCGCACAGAGATCATAAGGTCATGACTTTGCACAGCAAGGATGGGAAAGAATCCAAGGATGGTAACTTTCTTTTTCAACTTTTTTTCTCCGTATGCAGAAGTTTTATTGTGTTTGGTTGTTGAATTCCATATTGGAGAAGATTATGCATTCAAAAGATCTTCCTAGCAAAAGGAAAAAAGCTCTTAGACGAATGAAGAAGGGTATTATAGATTTATTTGCATTAGTGGTTAAAGTGAAGTACGCTGTCATAGGGTCTAATGCTAAAAGTTTGGTGTTCAACATTGTCTACTATGCCTGCAACTTGCTGTGTTTGATTGTTGAATTTGATTCATATCGAATCAAATGCACTATTGGGGTGTCCCTATGAGAAAAGTTGAAGAGAAAAAAAGCATTCTTAGAATACCTAAGAAAAAAGAAAGTGAAAGTTTGAAACAGTGTATTTATTTGCTCCTGTTGGCTGTTAGTTTAATTGAGTTTTGGTGCACTGTCTTAGGTTCTAAAGCTAAAATTAAGCCATTGGGTGGTGGAAAGGATTTCTTCAGCGACTTCTCCATCACAAGTACTATAATCACAGATGAAGAGTATAGTGTTTCAAAGATATCATCTGGTTTGAAAGAGATGGCTCTTGATACTAATTCAAAGAATCAAACAGGAGAATTCTGTGGTAAAGAATCAAATGACCAATTTGCCATTTTGGAAACCCCACATGCTCCAGCTCCCCCAAAAAACAGTGTTGGACGGAAGGCAAGAGGATCCAAAGAAAGAACTAAAGTATCAGCCACCAAAGAAAGCACTGATAATTTGTCTGATGCTCCTTCAACTTCAAAGAACCGCAGCACTAATTTCAATTTAATGACAGAAGAACCAAGAGGTGGATTCAATGATCTTAGTGGAACTGAGTTAAAATCCTCCCTTAAAAAACCTGGCAAGAAAAACCTGTGTCGCTCTGTAACTTGGGCAGATGAAAAGACTGATGACGCCAGTATTATGAACCTTCCAGAGGTCGGAGAAATGGGGAAGACAAAGGAATGTTCCAGAACCACAAGCAATTTGGTAAATTTCGACAATGATAATGAGGACATACTACGGGTTGAATCTGCTGAAGCCTGTGCAATGGCACTGAGCCAGGCAGCCGAAGCAATTACTTCTGGGCAAAGTGAGGTCTCTGATGCAGGTAATCTACTCTATGCATGATGGATTGGGGTTAGTTATTGTACATGCTATAAGATTATATTATTTGTCTGGCGCTGGCCATAAGATGAGTTCTGCTGAAAGTAGTTCTAGTTTTCCCTATTTTGTTTTATAAGCCATTCAGATTTTTTTTTTTCTGTGTTTTCATTGGTTATTAGCAAATATATACCGTTGCCTTCTCTGCATTTTTTGCCCCTTAAAACCATGAAACCTCATCCTTCCAAAACACAGAAAGTGGCTTTAGTGGTTATAAAATTTAAAAAAATTTCTTTGTTATATCTCTCTGGAAGAGACTTCATATAATTTTTCTTTGTGTTCGGTTGTTTGTAATATTCAGTGTCTGAAGCTGGAATTATTATATTGCCACATCCAAGTGACGCAAACGAAGAAGCATCTACTGATCCTGTCAATGCATCAGAACCATGAGTTCTGCTGAAAGTAGTTCTAGTTTTCCCTATTTTGTTTTATAAGCCATTCAGATTTTTTTTTTTCTGTGTTTTCATTGGTTATTAGCAAATATATACCGTTGCCTTCTCTGCATTTTTTGCCCCTTAAAACCATGAAACCTCATCCTTCCAAAACACAGAAAGTGGCTTTAGTGGTTATAAAATTTAAAAAAATTTCTTTGTTATATCTCTCTGGAAGAGACTTCATATAATTTTTCTTTGTGTTCGGTTGTTTGTAATATTCAGTGTCTGAAGCTGGAATTATTATATTGCCACATCCAAGTGACGCAAACGAAGAAGCATCTACTGATCCTGTCAATGCATCAGAACCACATTCATTTTCAGAGAAGTCAAACAAACTTGGGGTATTACGTTCCGATCTGTTTGATCCCAGTGACTCTTGGTATGATGCGCCTCCAGAGGGTTTCAGCCTAACTGTAAGCTCCTTCTCTTTTTTTTTGGACGGACGCACCTTCTGTTTGGAACCTAAATATATCCTTTTTCCCACCACGTTTACCTTTTTTCCAGTTATCTTCTTTTGCAACCATGTGGATGGCAATCTTTGCATGGGTAACCTCATCTTCCCTGGCCTACATTTATGGAAAAGATGATAAGTTCCATGAGGAATTTCTATATATTGATGGGAAGGAGTATCCAAGTAAAATTGTCTCTGCTGATGGCCGATCTTCTGAAATCAAGCAAACACTTGCTGGATGTCTAACACGGGCAATACCTGGACTTGCTTCTGAACTTAATCTATCAACCCCAATATCACGTTTGGAGAATGGGATGGTAATGATGAACATTTATGACATTGTTTTTTCCTCTCAATAACTTTTGCTGGTGATAACTGATAATTGAGAACTTACATTAGTTTGCATATATGCAGAGCTTATTTTTGTTTTTATTTATTTTGTGTTGGTATATATTTAGTATCTCTGGTACATGGTACCATTTCCCTGGGCAGTGGGTCTTATTTAATTTTTCCTTGTTGAAAAGGAAGTAGAAACATTTAATTGATTGACGGAGTAAGAGGAAAACCCCCTGCAACAATAGGTGATTAATTAAGAAAGATAAGCTATGACAGGTAAAAGGATTGCTTAGATTTGCACCTAAAAAACACAGTAGATAAAACGAAGTCCCTTAAACAATCAAAAGTGGAGAAAGAGTCCCTAAAAGGAACCACCCCAAATAATCCAGAAGAAAGCACATGTGAGTGCCAATGAAACTGTCTGTTTGATATGACCAAAAGGCTGACCCCACCCATAAAAATGGAAGGAGGTAAATTTTTTTATTAGGACACCGGTAGGCTAGCTACTAACGGAAAGCCTCCAATATAATATTGTCTATTGCTGGCTTTCTCGTAAGTGCACATTTAAGTGGTTTTAACTAGGAGAGACTTCCGTACAAGATTGCCTTTGGGCGATTGCTGTAGCAAATGAAAGAGCGCATTTTCTTACCTTCAGCCAGTAATTTAACCAGCGATGATCTTGAAGATTCAGGTTATTTGGAACTTTAAAGGCTTAAAGCTATAAACCTTGCTGTACTTCGGAAATGGTTGCGGTGATCGACTTTTGTGCTTTCCATGGCATAAGGAGATTAGAAAGTTGATGATTTTAGATTGACTCACAGGGAACTGGCTGTGTACTTTCTCTGCTTTATTTTTAGGGCAGGTGCTGGTATCTTCTAAAACAAGGCACTGTAAATTTAAAGTTTGTGATGGGGGGAGGGGAGGATTTGTGGGAGGATTCTTGGATGTATGGACCTCTAACCCCTGTTTAAACTCAGTTTTTTAGCTTGTGGTTTCTATTCTAATGTTACTATTGAAGACGGGTCGGAATTCTGTATGGAATTTGAAATTTAAAAGGCATTCTCATGATTTTGGAAGGTCTATACCACATCAGAGAAGAATACCATACTGTTAATCCAACTTTGCCTTATGAGTGACATCGATTCATGTTCTTGTGCAGGCGCACTTGTTAGACACCATGACTTTCCTTGATGCTCTTCCAGCATTCAGAATGAAGCAGTGGCAAGTAATCGTTCTCTTATTTATAGAAGCTTTATCTGTTTCCCGGATTCCTTCACTTGCCTCCCACATGTCAAGTAGTAGAAATCTGTATCATAAGGTTTGGCTCCCTATAGATCTCTTCCCTTTTGCTTAGAAATGAATGATTTGTTTTGATCATAGTGTTCAAGTATAAGAATTAAGAAAGCAATAAACATCATTACCGTTAAATATATACCAATTTTTGTTTTTGAGGACATAATGATAGATTTTCCCCTTTCAATTCAGAATTTGAAATTTGTACCTCTATATTGTTTAGTTTTCGGAAATATGCTATTATATAGTTTAATGAGAACCTCTAAAGTTCATGTCATGCTCTGTCGCGCAGTGTAAGTAATTGATCACGAAGAGTATTTGTACATTATAACTAACTATAACTTCAGACAGAATTTTTGATGAAATGCCGTATTCCTTAATTCTTAAATTGGGGTATTCTTTAACATCCTGCTCTCACTCTCACGCACATAGGTACTTGATCGTGCTCAGATACGATCTGACGAATACGAGATTATGAGAGATCATATATTACCTCTTGGTCGAACAGCTCAACTTTCAGATGAGAATGATGCCTAAAAGATTAGAACAAAAATCTCCAACACAATTATCATCACACTTGCGAACGGTTCAAATTGATGTCAAGTTCCTGGCAAATTCGATTCACAGTACATAATAGTCGGTAATCATACACACCACATGCTGTTTCTACATTTAGATTCTCTTGGTATTTCTTGTTGGGAGAATTGATCATTCCAGACTAGGTAAACATTTTCTTAAGAATTGCTTATAAACAGGTGTGGTGGCTGTTGTGCCATTTGAGGTGATTTTGTATTAAGTTATTTTGGAACAATTTAGTTCTAAACAACATAGTTAGGCTCTTTTTATGTCTTTAGTGTTAAAATAGTCATTATTATGCTTAAAGATGCCAAAAAAATTTTGGAGTAGAATTTTCATTTGCAATTTGCCAAAGAATTTGATAAAAAA

mRNA sequence

ATGGCAAAGAATCAATCTGTTTTGATTAAAGATACAGTATATAAATTGCAACTTGCACTTTATGAGGGCATTAAAAATGAGAATCAGCTATTTGCAGCTGGGTCTCTGATGTCTCGGAGTGACTACGAAGATGTGGTGACTGAGCGGTCTATTGCAGACCTCTGTGGATATCCATTATGCCATTCTAATTTGCCATCTGATAACACTAGGAGAGGCCGGTACAGAATTTCATTGAAAGAACATAAGGTGTATGATTTAGAAGAGACATATAAGTACTGCTCTTCCGCTTGCCTCATTAACAGCCGTGCCTTTTCTGGGAGATTGCAAGATGAGAGATGTTCGGTTATGAACCCAGATAAACTTAAAGAAATTCTTAAGCTGTTTGAGAATATGAGTTTGGATTCTAAGGAAAATATGGGGAATAATTGTGATTCGGGACTTGAAATTCAGGAGAAAATAGAAAGCAATATTGGAGAAGTTCCCATTGAAGAGTGGATGGGTCCATCAAATGCAATTGAAGGTTATGTGCCGCACAGAGATCATAAGGTCATGACTTTGCACAGCAAGGATGGGAAAGAATCCAAGGATGGTTCTAAAGCTAAAATTAAGCCATTGGGTGGTGGAAAGGATTTCTTCAGCGACTTCTCCATCACAAGTACTATAATCACAGATGAAGAGTATAGTGTTTCAAAGATATCATCTGGTTTGAAAGAGATGGCTCTTGATACTAATTCAAAGAATCAAACAGGAGAATTCTGTGGTAAAGAATCAAATGACCAATTTGCCATTTTGGAAACCCCACATGCTCCAGCTCCCCCAAAAAACAGTGTTGGACGGAAGGCAAGAGGATCCAAAGAAAGAACTAAAGTATCAGCCACCAAAGAAAGCACTGATAATTTGTCTGATGCTCCTTCAACTTCAAAGAACCGCAGCACTAATTTCAATTTAATGACAGAAGAACCAAGAGGTGGATTCAATGATCTTAGTGGAACTGAGTTAAAATCCTCCCTTAAAAAACCTGGCAAGAAAAACCTGTGTCGCTCTGTAACTTGGGCAGATGAAAAGACTGATGACGCCAGTATTATGAACCTTCCAGAGGTCGGAGAAATGGGGAAGACAAAGGAATGTTCCAGAACCACAAGCAATTTGGTAAATTTCGACAATGATAATGAGGACATACTACGGGTTGAATCTGCTGAAGCCTGTGCAATGGCACTGAGCCAGGCAGCCGAAGCAATTACTTCTGGGCAAAGTGAGGTCTCTGATGCAGTGTCTGAAGCTGGAATTATTATATTGCCACATCCAAGTGACGCAAACGAAGAAGCATCTACTGATCCTGTCAATGCATCAGAACCACATTCATTTTCAGAGAAGTCAAACAAACTTGGGGTATTACGTTCCGATCTGTTTGATCCCAGTGACTCTTGGTATGATGCGCCTCCAGAGGGTTTCAGCCTAACTTTATCTTCTTTTGCAACCATGTGGATGGCAATCTTTGCATGGGTAACCTCATCTTCCCTGGCCTACATTTATGGAAAAGATGATAAGTTCCATGAGGAATTTCTATATATTGATGGGAAGGAGTATCCAAGTAAAATTGTCTCTGCTGATGGCCGATCTTCTGAAATCAAGCAAACACTTGCTGGATGTCTAACACGGGCAATACCTGGACTTGCTTCTGAACTTAATCTATCAACCCCAATATCACGTTTGGAGAATGGGATGGCGCACTTGTTAGACACCATGACTTTCCTTGATGCTCTTCCAGCATTCAGAATGAAGCAGTGGCAAGTAATCGTTCTCTTATTTATAGAAGCTTTATCTGTTTCCCGGATTCCTTCACTTGCCTCCCACATGTCAAGTAGTAGAAATCTGTATCATAAGGTACTTGATCGTGCTCAGATACGATCTGACGAATACGAGATTATGAGAGATCATATATTACCTCTTGGTCGAACAGCTCAACTTTCAGATGAGAATGATGCCTAA

Coding sequence (CDS)

ATGGCAAAGAATCAATCTGTTTTGATTAAAGATACAGTATATAAATTGCAACTTGCACTTTATGAGGGCATTAAAAATGAGAATCAGCTATTTGCAGCTGGGTCTCTGATGTCTCGGAGTGACTACGAAGATGTGGTGACTGAGCGGTCTATTGCAGACCTCTGTGGATATCCATTATGCCATTCTAATTTGCCATCTGATAACACTAGGAGAGGCCGGTACAGAATTTCATTGAAAGAACATAAGGTGTATGATTTAGAAGAGACATATAAGTACTGCTCTTCCGCTTGCCTCATTAACAGCCGTGCCTTTTCTGGGAGATTGCAAGATGAGAGATGTTCGGTTATGAACCCAGATAAACTTAAAGAAATTCTTAAGCTGTTTGAGAATATGAGTTTGGATTCTAAGGAAAATATGGGGAATAATTGTGATTCGGGACTTGAAATTCAGGAGAAAATAGAAAGCAATATTGGAGAAGTTCCCATTGAAGAGTGGATGGGTCCATCAAATGCAATTGAAGGTTATGTGCCGCACAGAGATCATAAGGTCATGACTTTGCACAGCAAGGATGGGAAAGAATCCAAGGATGGTTCTAAAGCTAAAATTAAGCCATTGGGTGGTGGAAAGGATTTCTTCAGCGACTTCTCCATCACAAGTACTATAATCACAGATGAAGAGTATAGTGTTTCAAAGATATCATCTGGTTTGAAAGAGATGGCTCTTGATACTAATTCAAAGAATCAAACAGGAGAATTCTGTGGTAAAGAATCAAATGACCAATTTGCCATTTTGGAAACCCCACATGCTCCAGCTCCCCCAAAAAACAGTGTTGGACGGAAGGCAAGAGGATCCAAAGAAAGAACTAAAGTATCAGCCACCAAAGAAAGCACTGATAATTTGTCTGATGCTCCTTCAACTTCAAAGAACCGCAGCACTAATTTCAATTTAATGACAGAAGAACCAAGAGGTGGATTCAATGATCTTAGTGGAACTGAGTTAAAATCCTCCCTTAAAAAACCTGGCAAGAAAAACCTGTGTCGCTCTGTAACTTGGGCAGATGAAAAGACTGATGACGCCAGTATTATGAACCTTCCAGAGGTCGGAGAAATGGGGAAGACAAAGGAATGTTCCAGAACCACAAGCAATTTGGTAAATTTCGACAATGATAATGAGGACATACTACGGGTTGAATCTGCTGAAGCCTGTGCAATGGCACTGAGCCAGGCAGCCGAAGCAATTACTTCTGGGCAAAGTGAGGTCTCTGATGCAGTGTCTGAAGCTGGAATTATTATATTGCCACATCCAAGTGACGCAAACGAAGAAGCATCTACTGATCCTGTCAATGCATCAGAACCACATTCATTTTCAGAGAAGTCAAACAAACTTGGGGTATTACGTTCCGATCTGTTTGATCCCAGTGACTCTTGGTATGATGCGCCTCCAGAGGGTTTCAGCCTAACTTTATCTTCTTTTGCAACCATGTGGATGGCAATCTTTGCATGGGTAACCTCATCTTCCCTGGCCTACATTTATGGAAAAGATGATAAGTTCCATGAGGAATTTCTATATATTGATGGGAAGGAGTATCCAAGTAAAATTGTCTCTGCTGATGGCCGATCTTCTGAAATCAAGCAAACACTTGCTGGATGTCTAACACGGGCAATACCTGGACTTGCTTCTGAACTTAATCTATCAACCCCAATATCACGTTTGGAGAATGGGATGGCGCACTTGTTAGACACCATGACTTTCCTTGATGCTCTTCCAGCATTCAGAATGAAGCAGTGGCAAGTAATCGTTCTCTTATTTATAGAAGCTTTATCTGTTTCCCGGATTCCTTCACTTGCCTCCCACATGTCAAGTAGTAGAAATCTGTATCATAAGGTACTTGATCGTGCTCAGATACGATCTGACGAATACGAGATTATGAGAGATCATATATTACCTCTTGGTCGAACAGCTCAACTTTCAGATGAGAATGATGCCTAA

Protein sequence

MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLCHSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDKLKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRDHKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMALDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNLSDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDASIMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEVSDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAPPEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRSSEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDENDA*
Homology
[Close]
BLAST of CsaV3_4G002430 vs. NCBI nr
Match: XP_031739958.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis sativus] >KGN52984.1 hypothetical protein Csa_015280 [Cucumis sativus])

HSP 1 Score: 1294.6 bits (3349), Expect = 0.0e+00
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA
Sbjct: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL
Sbjct: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS
Sbjct: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
           IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP
Sbjct: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN
Sbjct: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 662

[Close]
BLAST of CsaV3_4G002430 vs. NCBI nr
Match: XP_008454119.1 (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis melo] >XP_008454120.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis melo])

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 618/662 (93.35%), Postives = 635/662 (95.92%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQS LIKDTVYKLQLALYEGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGS AKIKPLGGGKDFFSDFS TSTIITDEEYSVSKISS LKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSK QTGEFCGKESNDQF ILET HA APPKNSVG KARGSKERTKVSAT+EST+NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS NRSTNFNL+TEEP+GGFNDL GTE+KSSLK+PGKKNL RSVTWADEK DD S
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
            MNLPEVGE GKTKECSR TSNLVNFDNDNED++RVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLIRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           S+AVSEAGIIILPHPSDANEEAST+PV ASEPHSFSEKSNKLGVL SDLFDPSDSWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTEPVKASEPHSFSEKSNKLGVLHSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEF YIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASEL LSTPISRLE GMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPISRLEYGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLF+EALSV RIPSLASHMSSSRNLYHKVLDRAQI+SDEYEIM+DHILPLG TAQLS EN
Sbjct: 601 LLFMEALSVCRIPSLASHMSSSRNLYHKVLDRAQIQSDEYEIMKDHILPLGLTAQLSVEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 661

[Close]
BLAST of CsaV3_4G002430 vs. NCBI nr
Match: KAA0044516.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1199.1 bits (3101), Expect = 0.0e+00
Identity = 617/662 (93.20%), Postives = 635/662 (95.92%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQS LIKDTVYKLQLALYEGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LK+ILKLFENMSLDSKEN+GNNCDSGLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKDILKLFENMSLDSKENVGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGS AKIKPLGGGKDFFSDFS TSTIITDEEYSVSKISS LKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSK QTGEFCGKESNDQF ILET HA APPKNSVG KARGSKERTKVSAT+EST+NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS NRSTNFNL+TEEP+GGFNDL GTE+KSSLK+PGKKNL RSVTWADEK DD S
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
            MNLPEVGE GKTKECSR TSNLVNFDNDNED+LRVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLLRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           S+AVSEAGIIILPHPSDANEEASTDPV ASEPHSFSEKSNKLGVL SDLFDPS+SWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTDPVKASEPHSFSEKSNKLGVLHSDLFDPSESWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEF YIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASEL LSTP+SRLE GMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPVSRLEYGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLFIEALSV RIPSLASHMSSSRNLYHKVLDRAQI+SDEYEIM+DHILPLG TAQLS EN
Sbjct: 601 LLFIEALSVCRIPSLASHMSSSRNLYHKVLDRAQIQSDEYEIMKDHILPLGLTAQLSVEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 661

[Close]
BLAST of CsaV3_4G002430 vs. NCBI nr
Match: XP_038893419.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Benincasa hispida])

HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 591/662 (89.27%), Postives = 622/662 (93.96%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQSVLIKDTVYKLQLAL EGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNL SDNTRRGRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQ+ERCSVMNP+K
Sbjct: 61  HSNLSSDNTRRGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQNERCSVMNPEK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEIL+LFEN+SLDSKEN+GNNCD GLEIQE IESN GEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILRLFENLSLDSKENVGNNCDLGLEIQENIESNTGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGSKAKIKPLGGGKDFFSD S TSTI+TDEEYSVSKISSGLKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSKAKIKPLGGGKDFFSDLSFTSTILTDEEYSVSKISSGLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
            DT+SK QTGE CGKES DQF ILETPHAPAP KNSVGRKARGSKERTKVSATKEST+NL
Sbjct: 241 FDTDSKIQTGELCGKESKDQFTILETPHAPAPTKNSVGRKARGSKERTKVSATKESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS   +TN NLMTEEPRGG NDLSGTE+KSSLK+PGKKNL RSVTWADEKT D S
Sbjct: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTEIKSSLKQPGKKNLHRSVTWADEKTVDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
           I+NLPEV EMGK KECSR T NLVN DNDN D+LRVESAEACAMAL+QAAEAI+SGQ+EV
Sbjct: 361 IINLPEVREMGKKKECSRITRNLVNSDNDNGDLLRVESAEACAMALTQAAEAISSGQNEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           SDAVSEAGIIILP P+D NEEAST+PVNASEPHS SEKSNKLGVLRSDLFDP+DSWYDAP
Sbjct: 421 SDAVSEAGIIILPRPNDGNEEASTNPVNASEPHSSSEKSNKLGVLRSDLFDPNDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEFLYIDGKEYP KIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTR+IPGLASEL LSTPIS LE+GM HLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLFIEALSV +IPSLASHMS+SR+LYHKVLDRAQIRSDEYE+M+DHILPLGR AQ S EN
Sbjct: 601 LLFIEALSVCQIPSLASHMSNSRSLYHKVLDRAQIRSDEYEVMKDHILPLGRIAQFSGEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 662

[Close]
BLAST of CsaV3_4G002430 vs. NCBI nr
Match: TYK29645.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1144.0 bits (2958), Expect = 0.0e+00
Identity = 589/629 (93.64%), Postives = 604/629 (96.03%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQS LIKDTVYKLQLALYEGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGS AKIKPLGGGKDFFSDFS TSTIITDEEYSVSKISS LKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSK QTGEFCGKESNDQF ILET HA APPKNSVG KARGSKERTKVSAT+EST+NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS NRSTNFNL+TEEP+GGFNDL GTE+KSSLK+PGKKNL RSVTWADEK DD S
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
            MNLPEVGE GKTKECSR TSNLVNFDNDNED++RVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLIRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           S+AVSEAGIIILPHPSDANEEAST+PV ASEPHSFSEKSNKLGVL SDLFDPSDSWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTEPVKASEPHSFSEKSNKLGVLHSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEF YIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASEL LSTPISRLE GMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPISRLEYGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKV 630
           LLF+EALSV RIPSLASHMSSSRNLYHKV
Sbjct: 601 LLFMEALSVCRIPSLASHMSSSRNLYHKV 628

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy Swiss-Prot
Match: F4K1B1 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g26760 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-119
Identity = 302/764 (39.53%), Postives = 406/764 (53.14%), Query Frame = 0 

Query: 1   MAK-NQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPL 60
           MAK N+++ I D V+KLQL + E   ++NQLFAA  LMSRSDYEDVVTER+IA LCGY L
Sbjct: 1   MAKDNEAIAINDAVHKLQLYMLENTTDQNQLFAARKLMSRSDYEDVVTERAIAKLCGYTL 60

Query: 61  CHSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPD 120
           C   LPSD +RRG+YRISLK+HKVYDL+ET K+CS+ CLI+S+ FSG LQ+ R    +  
Sbjct: 61  CQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGCLIDSKTFSGSLQEARTLEFDSV 120

Query: 121 KLKEILKLFENMSLDSKENMGNNCD---SGLEIQEKIESNIGEVPIEEWMGPSNAIEGYV 180
           KL EIL LF + SL+ K ++  N D   S L I+E       E+ +E+WMGPSNA+EGYV
Sbjct: 121 KLNEILDLFGD-SLEVKGSLDVNKDLDLSKLMIKENFGVRGEELSLEKWMGPSNAVEGYV 180

Query: 181 P------HRDHKVMT------------------------------------LHSKDGK-- 240
           P        D K  T                                    + S DGK  
Sbjct: 181 PFDRSKSSNDSKATTQSNQEKHEMDFTSTVIMPDVNSVSKLPPQTKQASTVVESVDGKGK 240

Query: 241 -------------------ESKDGSKAKIKPLGGG---------------------KDF- 300
                                K+  K      G G                     KDF 
Sbjct: 241 TVLKEQTVVPPTKKVSRFRREKEKEKKTFGVDGMGCAQEKTTVLPRKILSFCNEIEKDFK 300

Query: 301 ---FSDFSITSTIITDE----EYSVSKISSGLKEMALDTNSKNQTGEFCGKESNDQFAIL 360
              F +  + S+ +  +    EYSVSK      E +L    K       GK         
Sbjct: 301 NFGFDEMGLASSAMMSDGYGVEYSVSKQPQCSMEDSLSCKLKGDLQTLDGK--------- 360

Query: 361 ETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNLSDAPSTSKNRSTNFNLMTEEPRGG 420
            T    +   N+ G K +  K R K+ + +   ++  D        S        E    
Sbjct: 361 NTLSGSSSGSNTKGSKTKPEKSRKKIISVEYHANSYEDGEEILAAES-------YERHKA 420

Query: 421 FNDLSGTEL--KSSLKKPGKKNLCRSVTWADEKTDDASIMNLPEVGEMGKTKECSRTTSN 480
            +  S +E+  KS LK  G K L RSVTWAD+      +  +       +  + +   S 
Sbjct: 421 QDVCSSSEIVTKSCLKISGSKKLSRSVTWADQNDGRGDLCEV-------RNNDNAAGPSL 480

Query: 481 LVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEVSDAVSEAGIIILPH----PSDA 540
             N   D   + R+  AEA A ALSQAAEA++SG S+ SDA ++AGII+LP       + 
Sbjct: 481 SSNDIEDVNSLSRLALAEALATALSQAAEAVSSGNSDASDATAKAGIILLPSTHQLDEEV 540

Query: 541 NEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAPPEGFSLTLSSFATMWMAI 600
            EE S + +   EP +  +  NK G+  SDLFD   SW+D PPEGF+LTLS+FA MW ++
Sbjct: 541 TEEHSEEEMTEEEP-TLLKWPNKPGIPDSDLFDRDQSWFDGPPEGFNLTLSNFAVMWDSL 600

Query: 601 FAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRSSEIKQTLAGCLTRAIPGL 660
           F WV+SSSLAYIYGK++  HEEFL ++GKEYP +I+  DG SSEIKQT+AGCL RA+P +
Sbjct: 601 FGWVSSSSLAYIYGKEESAHEEFLLVNGKEYPRRIIMVDGLSSEIKQTIAGCLARALPRV 660

Query: 661 ASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVSRIPSLASH 663
            + L L   IS LE G+  LL+TM+   A+P+FR+K+W VIVLLF++ALSVSRIP +A +
Sbjct: 661 VTHLRLPIAISELEKGLGSLLETMSLTGAVPSFRVKEWLVIVLLFLDALSVSRIPRIAPY 720

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy Swiss-Prot
Match: A2Y040 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18345 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.0e-102
Identity = 274/737 (37.18%), Postives = 386/737 (52.37%), Query Frame = 0 

Query: 2   AKNQSVLIKDTVYKLQLALYEG--IKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPL 61
           A+ +   +   V+++Q+ALY+G     E  L AA SL+S  DY DVVTERSIAD CGYP 
Sbjct: 11  ARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTERSIADACGYPA 70

Query: 62  CHSNLPSDNTR---RGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVM 121
           C + LPS++ R     R+RISL+EH+VYDLEE  K+CS  CL+ S AF   L  +R   +
Sbjct: 71  CPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGASLPPDRPFGV 130

Query: 122 NPDKLKEILKLFE---------NMSLD-SKENMGNNCDSG--LEIQEKIESNIGEVPIEE 181
           +PD+L  ++ LFE          ++L       G   + G  +EI EK  +  GEV ++E
Sbjct: 131 SPDRLDALVALFEGGGGGGGDGGLALGFGASGDGKEVEEGRKVEIMEKEAAGTGEVTLQE 190

Query: 182 WMGPSNAIEGYVPHRDHKV--------------------MTLHSKDGKESKDG------S 241
           W+GPS+AIEGYVP RD  V                    + + S++    + G      +
Sbjct: 191 WIGPSDAIEGYVPRRDRVVGGPKKEAKQNDACSAEQSSNINVDSRNASSGESGMVLTENT 250

Query: 242 KAKIK-----PLGGGKDFFSDFSITSTIITD--------------EEYSVSKISSGLKEM 301
           KAK K     PL   K    D  + S+ I+D              ++   +K + G   +
Sbjct: 251 KAKKKEATKTPLKMFKQ-DEDNDMLSSCISDSIVKQLEDVVLEEKKDKKKNKAAKGTSRV 310

Query: 302 ALDTNSKNQTGEFCGKESNDQFAILETPHAPAP-----------PKNSVGRKARGSKERT 361
                +K   G   G E +    I+   H                 + +  +   S +  
Sbjct: 311 GKSKPAKRPVGR-DGHEVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANEQPSSSQYA 370

Query: 362 KVSATKESTDNLSDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRS 421
            + + +  T+ L +  S +       N+  +E     +D     L+SSLK  G KN  RS
Sbjct: 371 AIDSVQAYTEELDELFSNA------VNIAKDETS---DDSGRCTLRSSLKAVGSKNAGRS 430

Query: 422 VTWADEKTDDASIMNLPEVGEMGKTKECSRT-TSNLVNFDNDNEDILRVESAEACAMALS 481
           V WADE                G   E SR   S+        +  +R ESAEACA AL 
Sbjct: 431 VKWADEN---------------GSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALI 490

Query: 482 QAAEAITSGQSEVSDAVSEAGIIILP---HPSDANEEASTDPVNASEPHSFS------EK 541
           +AAEAI+SG SEV DAVS+AGIIILP   +    N +   D  +A E   F       + 
Sbjct: 491 EAAEAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYDNDK-DAGENEIFEIDRGVVKW 550

Query: 542 SNKLGVLRSDLFDPSDSWYDAPPEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFH 601
             K  +L +D+FD  DSW+D PPEGFSLTLSSFATMW A+F WV+ SSLAY+YG D+   
Sbjct: 551 PKKTVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSM 610

Query: 602 EEFLYIDGKEYPSKIVSADGRSSEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHL 656
           E+ L   G+E P K V  DG SSEI++ L  C+  A+P L S L +  P+S+LE  + +L
Sbjct: 611 EDLLIAGGRECPQKRVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYL 670

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy Swiss-Prot
Match: Q6AVZ9 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0134300 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.3e-101
Identity = 274/740 (37.03%), Postives = 390/740 (52.70%), Query Frame = 0 

Query: 2   AKNQSVLIKDTVYKLQLALYEG--IKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPL 61
           A+ +   +   V+++Q+ALY+G     E  L AA SL+S  DY DVVTERSIAD CGYP 
Sbjct: 11  ARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTERSIADACGYPA 70

Query: 62  CHSNLPSDNTR---RGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVM 121
           C + LPS++ R     R+RISL+EH+VYDLEE  K+CS  CL+ S AF   L  +R   +
Sbjct: 71  CPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGASLPPDRPFGV 130

Query: 122 NPDKLKEILKLFE---------NMSLD-SKENMGNNCDSG--LEIQEKIESNIGEVPIEE 181
           +PD+L  ++ LFE          ++L       G   + G  +EI EK  +  GEV ++E
Sbjct: 131 SPDRLDALVALFEGGGGGGDDGGLALGFGASGDGKEVEEGRKVEIMEKEAAGTGEVTLQE 190

Query: 182 WMGPSNAIEGYVPHRDHKV--------------------MTLHSKDGKESKDG------S 241
           W+GPS+AIEGYVP RD  V                    + + S++    + G      +
Sbjct: 191 WIGPSDAIEGYVPRRDRVVGGPKKEAKQNDACSAEQSSNINVDSRNASSGESGMVLTENT 250

Query: 242 KAKIK-----PLGGGKDFFSDFSITSTIITD--------------EEYSVSKISSGLKEM 301
           KAK K     PL   K    D  + S+ I+D              ++   +K + G   +
Sbjct: 251 KAKKKEATKTPLKMFKQ-DEDNDMLSSCISDSIVKQLEDVVLEEKKDKKKNKAAKGTSRV 310

Query: 302 ALDTNSKNQTG------EFC--------GKESNDQFAILETPHAPAPPKNSVGRKARGSK 361
                +K   G      +F         G E  D  A+ +   + +   N     ++ + 
Sbjct: 311 GKSKPAKRPVGRDGHEVDFTSTIIMGDRGSEMMDHGALGQYNFSSSILANEQPSSSQYAA 370

Query: 362 ERTKVSATKESTDNLSDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNL 421
             +  + T+E  +  S+A + +K+ ++             +D     L+SSLK  G KN 
Sbjct: 371 IDSVQAYTEELDELFSNAVNIAKDETS-------------DDSGRCTLRSSLKAVGSKNA 430

Query: 422 CRSVTWADEKTDDASIMNLPEVGEMGKTKECSRT-TSNLVNFDNDNEDILRVESAEACAM 481
             SV WADE                G   E SR   S+        +  +R ESAEACA 
Sbjct: 431 GHSVKWADEN---------------GSVLETSRAFVSHSSKSQESMDSSVRRESAEACAA 490

Query: 482 ALSQAAEAITSGQSEVSDAVSEAGIIILP---HPSDANEEASTDPVNASEPHSFS----- 541
           AL +AAEAI+SG SEV DAVS+AGIIILP   +    N +   D  +A E   F      
Sbjct: 491 ALIEAAEAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYDNDK-DAGENEIFEIDRGV 550

Query: 542 -EKSNKLGVLRSDLFDPSDSWYDAPPEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDD 601
            +   K  +L +D+FD  DSW+D PPEGFSLTLSSFATMW A+F WV+ SSLAY+YG D+
Sbjct: 551 VKWPKKTVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDE 610

Query: 602 KFHEEFLYIDGKEYPSKIVSADGRSSEIKQTLAGCLTRAIPGLASELNLSTPISRLENGM 656
              E+ L   G+E P K V  DG SSEI++ L  C+  A+P L S L +  P+S+LE  +
Sbjct: 611 SSMEDLLIAGGRECPQKRVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITL 670

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy Swiss-Prot
Match: Q8IXW5 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Homo sapiens OX=9606 GN=RPAP2 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-10
Identity = 108/438 (24.66%), Postives = 174/438 (39.73%), Query Frame = 0 

Query: 27  ENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLCHSNLPSDNTRRGRYRISLKEHKVYDL 86
           E  L   G  ++ + Y DVV ERSI  LCGYPLC   L      + +Y+IS K +KVYD+
Sbjct: 72  EEFLMECGRFITPAHYSDVVDERSIVKLCGYPLCQKKL--GIVPKQKYKISTKTNKVYDI 131

Query: 87  EETYKYCSSACLINSRAFSGRLQDERCSVMNPDKLKEILKLFENMS--------LDSKEN 146
            E   +CS+ C   S+ F  ++      V   ++  +   L E  S        L SK  
Sbjct: 132 TERKSFCSNFCYQASKFFEAQIPKTPVWVREEERHPDFQLLKEEQSGHSGEEVQLCSKAI 191

Query: 147 MGNNCDSGLEIQEKIESNIGEVPIE-----EWMGPSNAIEGYVPHRDHKVMTLHSKDGKE 206
             ++ D+    +++ ES+      +     E    S+ + G  P+  +    LH K   +
Sbjct: 192 KTSDIDNPSHFEKQYESSSSSTHSDSSSDNEQDFVSSILPGNRPNSTNIRPQLHQKSIMK 251

Query: 207 SKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMALDTNSKNQTGEFC 266
            K G KA  K                    D+E +V  ++  L +  LD+  K+ T E  
Sbjct: 252 KKAGHKANSKH------------------KDKEQTVVDVTEQLGDCKLDSQEKDATCELP 311

Query: 267 GKESNDQFAILET-PHAPAPPKNSVGRKARGSKERTKVSATKESTDNLSD--APSTSKNR 326
            ++ N Q +   T P      +NS    +R   E T V  +K+S ++     A S   +R
Sbjct: 312 LQKVNTQSSSNSTLPERLKASENSESEYSR--SEITLVGISKKSAEHFKRKFAKSNQVSR 371

Query: 327 STNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDASIMNLPEVGEM 386
           S + ++      G          K +L K  K+ L   + W  E+T       L  +   
Sbjct: 372 SVSSSVQVCPEVG----------KRNLLKVLKETL---IEWKTEET-------LRFLYGQ 431

Query: 387 GKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEVSDAVSEAGII 446
                C +  ++LV  + D +DI+    +   A   SQ          + S     +G  
Sbjct: 432 NYASVCLKPEASLVKEELDEDDIISDPDSHFPAWRESQ-------NSLDESLPFRGSGTA 460

Query: 447 ILPHPSDANEEASTDPVN 449
           I P PS  N +  T+ +N
Sbjct: 492 IKPLPSYENLKKETEKLN 460

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy Swiss-Prot
Match: Q5RA37 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Pongo abelii OX=9601 GN=RPAP2 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.3e-10
Identity = 108/438 (24.66%), Postives = 173/438 (39.50%), Query Frame = 0 

Query: 27  ENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLCHSNLPSDNTRRGRYRISLKEHKVYDL 86
           E  L   G  ++ + Y DVV ERSI  LCGYPLC   L      + +Y+IS K +KVYD+
Sbjct: 72  EEFLMECGKFITPAHYSDVVDERSIVKLCGYPLCQKKL--GIVPKQKYKISTKTNKVYDI 131

Query: 87  EETYKYCSSACLINSRAFSGRLQDERCSVMNPDKLKEILKLFENMS--------LDSKEN 146
            E   +CS+ C   S+ F  ++      V   ++  +   L E  S        L SK  
Sbjct: 132 TERKSFCSNFCYQASKFFEAQIPKTPVWVREEERHPDFQLLKEQQSGHSGEEVQLCSKAI 191

Query: 147 MGNNCDSGLEIQEKIESNIGEVPIE-----EWMGPSNAIEGYVPHRDHKVMTLHSKDGKE 206
             ++ D+    +++ ES+      +     E    S+ + G  P+       LH K   +
Sbjct: 192 KTSDIDNPSHFEKQYESSSSSTHSDSSSDNEQDFVSSILPGNRPNSTSIRPQLHQKSIMK 251

Query: 207 SKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMALDTNSKNQTGEFC 266
            K G KA  K                    D+E +V  ++  L +  LD+  K+ T E  
Sbjct: 252 KKAGHKANSKH------------------KDKEQTVIDVTEQLGDCKLDSQEKDATCELP 311

Query: 267 GKESNDQFAILET-PHAPAPPKNSVGRKARGSKERTKVSATKESTDNLSD--APSTSKNR 326
            ++ N Q +   T P      +NS    +R   E T V  +K+S ++     A S   +R
Sbjct: 312 LQKVNTQSSSNSTLPERLKASENSESEYSR--SEITLVGISKKSAEHFKRKFAKSNQVSR 371

Query: 327 STNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDASIMNLPEVGEM 386
           S + ++      G          K +L K  K+ L   + W  E+T       L  +   
Sbjct: 372 SVSSSVQVCPEVG----------KRNLLKILKETL---IEWKTEET-------LRFLYGQ 431

Query: 387 GKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEVSDAVSEAGII 446
                C +  ++LV  + D +DI+    +   A   SQ          + S     +G  
Sbjct: 432 NYASVCLKPEASLVKEELDEDDIISDPDSHFPAWRESQ-------NSLDESLPFRGSGTA 460

Query: 447 ILPHPSDANEEASTDPVN 449
           I P PS  N +  T+ +N
Sbjct: 492 IKPLPSYENLKKETEKLN 460

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy TrEMBL
Match: A0A0A0KVU3 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G009360 PE=3 SV=1)

HSP 1 Score: 1294.6 bits (3349), Expect = 0.0e+00
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA
Sbjct: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL
Sbjct: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS
Sbjct: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
           IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP
Sbjct: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN
Sbjct: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 662

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy TrEMBL
Match: A0A1S3BXZ9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103494620 PE=3 SV=1)

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 618/662 (93.35%), Postives = 635/662 (95.92%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQS LIKDTVYKLQLALYEGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGS AKIKPLGGGKDFFSDFS TSTIITDEEYSVSKISS LKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSK QTGEFCGKESNDQF ILET HA APPKNSVG KARGSKERTKVSAT+EST+NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS NRSTNFNL+TEEP+GGFNDL GTE+KSSLK+PGKKNL RSVTWADEK DD S
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
            MNLPEVGE GKTKECSR TSNLVNFDNDNED++RVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLIRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           S+AVSEAGIIILPHPSDANEEAST+PV ASEPHSFSEKSNKLGVL SDLFDPSDSWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTEPVKASEPHSFSEKSNKLGVLHSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEF YIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASEL LSTPISRLE GMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPISRLEYGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLF+EALSV RIPSLASHMSSSRNLYHKVLDRAQI+SDEYEIM+DHILPLG TAQLS EN
Sbjct: 601 LLFMEALSVCRIPSLASHMSSSRNLYHKVLDRAQIQSDEYEIMKDHILPLGLTAQLSVEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 661

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy TrEMBL
Match: A0A5A7TQX7 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002560 PE=3 SV=1)

HSP 1 Score: 1199.1 bits (3101), Expect = 0.0e+00
Identity = 617/662 (93.20%), Postives = 635/662 (95.92%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQS LIKDTVYKLQLALYEGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LK+ILKLFENMSLDSKEN+GNNCDSGLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKDILKLFENMSLDSKENVGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGS AKIKPLGGGKDFFSDFS TSTIITDEEYSVSKISS LKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSK QTGEFCGKESNDQF ILET HA APPKNSVG KARGSKERTKVSAT+EST+NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS NRSTNFNL+TEEP+GGFNDL GTE+KSSLK+PGKKNL RSVTWADEK DD S
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
            MNLPEVGE GKTKECSR TSNLVNFDNDNED+LRVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLLRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           S+AVSEAGIIILPHPSDANEEASTDPV ASEPHSFSEKSNKLGVL SDLFDPS+SWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTDPVKASEPHSFSEKSNKLGVLHSDLFDPSESWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEF YIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASEL LSTP+SRLE GMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPVSRLEYGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLFIEALSV RIPSLASHMSSSRNLYHKVLDRAQI+SDEYEIM+DHILPLG TAQLS EN
Sbjct: 601 LLFIEALSVCRIPSLASHMSSSRNLYHKVLDRAQIQSDEYEIMKDHILPLGLTAQLSVEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 661

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy TrEMBL
Match: A0A5D3E2V9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002570 PE=3 SV=1)

HSP 1 Score: 1144.0 bits (2958), Expect = 0.0e+00
Identity = 589/629 (93.64%), Postives = 604/629 (96.03%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQS LIKDTVYKLQLALYEGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
           HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHRD
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           HK+MTL SKDGKESKDGS AKIKPLGGGKDFFSDFS TSTIITDEEYSVSKISS LKEMA
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
           LDTNSK QTGEFCGKESNDQF ILET HA APPKNSVG KARGSKERTKVSAT+EST+NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS NRSTNFNL+TEEP+GGFNDL GTE+KSSLK+PGKKNL RSVTWADEK DD S
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
            MNLPEVGE GKTKECSR TSNLVNFDNDNED++RVESAEACAMALSQAAEAITSGQSEV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLIRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           S+AVSEAGIIILPHPSDANEEAST+PV ASEPHSFSEKSNKLGVL SDLFDPSDSWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTEPVKASEPHSFSEKSNKLGVLHSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEF YIDGKEYPSKIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTRAIPGLASEL LSTPISRLE GMAHLLDTMTFLDALPAFRMKQWQVIV
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPISRLEYGMAHLLDTMTFLDALPAFRMKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKV 630
           LLF+EALSV RIPSLASHMSSSRNLYHKV
Sbjct: 601 LLFMEALSVCRIPSLASHMSSSRNLYHKV 628

[Close]
BLAST of CsaV3_4G002430 vs. ExPASy TrEMBL
Match: A0A6J1GWL9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111457827 PE=3 SV=1)

HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 559/662 (84.44%), Postives = 599/662 (90.48%), Query Frame = 0 

Query: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60
           MAKNQ++LIKDTVYKLQLAL +GI NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQTILIKDTVYKLQLALLDGIHNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120
            SNLPSDNTR+GRYRISLKEHKVYDLEETYKYCSS CLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  QSNLPSDNTRKGRYRISLKEHKVYDLEETYKYCSSTCLINSRAFSGRLQDERCSVMNPGK 120

Query: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180
           LKEIL+LFEN+SLDSKEN  N+CD GLEIQEKIES+IGEVPIEEWMGPSNAIEGYVPHR+
Sbjct: 121 LKEILRLFENLSLDSKENTRNSCDLGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRN 180

Query: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240
           H +MT   KDGKE KDGSKAKIK LG GKDFFSDFS  +T+ITDEEYSVSKISSGLKEM 
Sbjct: 181 HNIMTSPRKDGKELKDGSKAKIKQLGVGKDFFSDFSFATTVITDEEYSVSKISSGLKEMT 240

Query: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300
            DT SK QTGEFCGK+SN+QF ILETPH PAP KNSVGRKARGSKERT VSAT ES +NL
Sbjct: 241 FDTKSKAQTGEFCGKQSNEQFTILETPHGPAPTKNSVGRKARGSKERTNVSATAESNNNL 300

Query: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360
           SDAPSTS + STN N+ TEEP GG NDL+ T++KSSLK+PGKKNL RSVTWAD KTD+ S
Sbjct: 301 SDAPSTSNHCSTNCNITTEEPNGGSNDLNETQIKSSLKQPGKKNLRRSVTWADAKTDETS 360

Query: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420
           I+NLPE  EMGKTKECSR TSNLVN DN NEDILRVESAEACAMALSQAAEAITSG++EV
Sbjct: 361 IINLPEDREMGKTKECSRMTSNLVNADNGNEDILRVESAEACAMALSQAAEAITSGKNEV 420

Query: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480
           SDAVSEAGIIILP PSDANEEAST+  N SEPHS SEKSNK G+LRSDLFDP+DSWYD+P
Sbjct: 421 SDAVSEAGIIILPRPSDANEEASTNGENISEPHSSSEKSNKPGILRSDLFDPNDSWYDSP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKD+KFHEEF YIDG+EYP KIVSADGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWMTSSSLAYIYGKDEKFHEEFQYIDGREYPRKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIV 600
           SEIKQTLAGCLTR+IPGLASEL LSTPIS LE+GM  LLDTMTFLDALPAFR KQWQVIV
Sbjct: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGCLLDTMTFLDALPAFRTKQWQVIV 600

Query: 601 LLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDEYEIMRDHILPLGRTAQLSDEN 660
           LLFIEALSV RIPSL S +S SR+L+HKVLDRAQIRSDEYE ++DHILPLGRTAQ   EN
Sbjct: 601 LLFIEALSVCRIPSLDSQVSHSRSLFHKVLDRAQIRSDEYETLKDHILPLGRTAQFPGEN 660

Query: 661 DA 663
           DA
Sbjct: 661 DA 662

[Close]
BLAST of CsaV3_4G002430 vs. TAIR 10
Match: AT5G26760.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 432.2 bits (1110), Expect = 7.6e-121
Identity = 302/764 (39.53%), Postives = 406/764 (53.14%), Query Frame = 0 

Query: 1   MAK-NQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPL 60
           MAK N+++ I D V+KLQL + E   ++NQLFAA  LMSRSDYEDVVTER+IA LCGY L
Sbjct: 1   MAKDNEAIAINDAVHKLQLYMLENTTDQNQLFAARKLMSRSDYEDVVTERAIAKLCGYTL 60

Query: 61  CHSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPD 120
           C   LPSD +RRG+YRISLK+HKVYDL+ET K+CS+ CLI+S+ FSG LQ+ R    +  
Sbjct: 61  CQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGCLIDSKTFSGSLQEARTLEFDSV 120

Query: 121 KLKEILKLFENMSLDSKENMGNNCD---SGLEIQEKIESNIGEVPIEEWMGPSNAIEGYV 180
           KL EIL LF + SL+ K ++  N D   S L I+E       E+ +E+WMGPSNA+EGYV
Sbjct: 121 KLNEILDLFGD-SLEVKGSLDVNKDLDLSKLMIKENFGVRGEELSLEKWMGPSNAVEGYV 180

Query: 181 P------HRDHKVMT------------------------------------LHSKDGK-- 240
           P        D K  T                                    + S DGK  
Sbjct: 181 PFDRSKSSNDSKATTQSNQEKHEMDFTSTVIMPDVNSVSKLPPQTKQASTVVESVDGKGK 240

Query: 241 -------------------ESKDGSKAKIKPLGGG---------------------KDF- 300
                                K+  K      G G                     KDF 
Sbjct: 241 TVLKEQTVVPPTKKVSRFRREKEKEKKTFGVDGMGCAQEKTTVLPRKILSFCNEIEKDFK 300

Query: 301 ---FSDFSITSTIITDE----EYSVSKISSGLKEMALDTNSKNQTGEFCGKESNDQFAIL 360
              F +  + S+ +  +    EYSVSK      E +L    K       GK         
Sbjct: 301 NFGFDEMGLASSAMMSDGYGVEYSVSKQPQCSMEDSLSCKLKGDLQTLDGK--------- 360

Query: 361 ETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNLSDAPSTSKNRSTNFNLMTEEPRGG 420
            T    +   N+ G K +  K R K+ + +   ++  D        S        E    
Sbjct: 361 NTLSGSSSGSNTKGSKTKPEKSRKKIISVEYHANSYEDGEEILAAES-------YERHKA 420

Query: 421 FNDLSGTEL--KSSLKKPGKKNLCRSVTWADEKTDDASIMNLPEVGEMGKTKECSRTTSN 480
            +  S +E+  KS LK  G K L RSVTWAD+      +  +       +  + +   S 
Sbjct: 421 QDVCSSSEIVTKSCLKISGSKKLSRSVTWADQNDGRGDLCEV-------RNNDNAAGPSL 480

Query: 481 LVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEVSDAVSEAGIIILPH----PSDA 540
             N   D   + R+  AEA A ALSQAAEA++SG S+ SDA ++AGII+LP       + 
Sbjct: 481 SSNDIEDVNSLSRLALAEALATALSQAAEAVSSGNSDASDATAKAGIILLPSTHQLDEEV 540

Query: 541 NEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAPPEGFSLTLSSFATMWMAI 600
            EE S + +   EP +  +  NK G+  SDLFD   SW+D PPEGF+LTLS+FA MW ++
Sbjct: 541 TEEHSEEEMTEEEP-TLLKWPNKPGIPDSDLFDRDQSWFDGPPEGFNLTLSNFAVMWDSL 600

Query: 601 FAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRSSEIKQTLAGCLTRAIPGL 660
           F WV+SSSLAYIYGK++  HEEFL ++GKEYP +I+  DG SSEIKQT+AGCL RA+P +
Sbjct: 601 FGWVSSSSLAYIYGKEESAHEEFLLVNGKEYPRRIIMVDGLSSEIKQTIAGCLARALPRV 660

Query: 661 ASELNLSTPISRLENGMAHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVSRIPSLASH 663
            + L L   IS LE G+  LL+TM+   A+P+FR+K+W VIVLLF++ALSVSRIP +A +
Sbjct: 661 VTHLRLPIAISELEKGLGSLLETMSLTGAVPSFRVKEWLVIVLLFLDALSVSRIPRIAPY 720

[Close]
BLAST of CsaV3_4G002430 vs. TAIR 10
Match: AT5G26760.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 279.3 bits (713), Expect = 8.3e-75
Identity = 182/443 (41.08%), Postives = 252/443 (56.88%), Query Frame = 0 

Query: 226 EYSVSKISSGLKEMALDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSK 285
           EYSVSK      E +L    K       GK          T    +   N+ G K +  K
Sbjct: 16  EYSVSKQPQCSMEDSLSCKLKGDLQTLDGK---------NTLSGSSSGSNTKGSKTKPEK 75

Query: 286 ERTKVSATKESTDNLSDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTEL--KSSLKKPGKK 345
            R K+ + +   ++  D        S        E     +  S +E+  KS LK  G K
Sbjct: 76  SRKKIISVEYHANSYEDGEEILAAES-------YERHKAQDVCSSSEIVTKSCLKISGSK 135

Query: 346 NLCRSVTWADEKTDDASIMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACA 405
            L RSVTWAD+      +  +       +  + +   S   N   D   + R+  AEA A
Sbjct: 136 KLSRSVTWADQNDGRGDLCEV-------RNNDNAAGPSLSSNDIEDVNSLSRLALAEALA 195

Query: 406 MALSQAAEAITSGQSEVSDAVSEAGIIILPH----PSDANEEASTDPVNASEPHSFSEKS 465
            ALSQAAEA++SG S+ SDA ++AGII+LP       +  EE S + +   EP +  +  
Sbjct: 196 TALSQAAEAVSSGNSDASDATAKAGIILLPSTHQLDEEVTEEHSEEEMTEEEP-TLLKWP 255

Query: 466 NKLGVLRSDLFDPSDSWYDAPPEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHE 525
           NK G+  SDLFD   SW+D PPEGF+LTLS+FA MW ++F WV+SSSLAYIYGK++  HE
Sbjct: 256 NKPGIPDSDLFDRDQSWFDGPPEGFNLTLSNFAVMWDSLFGWVSSSSLAYIYGKEESAHE 315

Query: 526 EFLYIDGKEYPSKIVSADGRSSEIKQTLAGCLTRAIPGLASELNLSTPISRLENGMAHLL 585
           EFL ++GKEYP +I+  DG SSEIKQT+AGCL RA+P + + L L   IS LE G+  LL
Sbjct: 316 EFLLVNGKEYPRRIIMVDGLSSEIKQTIAGCLARALPRVVTHLRLPIAISELEKGLGSLL 375

Query: 586 DTMTFLDALPAFRMKQWQVIVLLFIEALSVSRIPSLASHMSSSRNLYHKVLDRAQIRSDE 645
           +TM+   A+P+FR+K+W VIVLLF++ALSVSRIP +A ++S+      K+L+ + I ++E
Sbjct: 376 ETMSLTGAVPSFRVKEWLVIVLLFLDALSVSRIPRIAPYISNR----DKILEGSGIGNEE 430

Query: 646 YEIMRDHILPLGRTAQLSDENDA 663
           YE M+D +LPLGR  Q +  + A
Sbjct: 436 YETMKDILLPLGRVPQFATRSGA 430

The following BLAST results are available for this feature:
BLAST of CsaV3_4G002430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031739958.10.0e+00100.00putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis sat... [more]
XP_008454119.10.0e+0093.35PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [... [more]
KAA0044516.10.0e+0093.20putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumi... [more]
XP_038893419.10.0e+0089.27putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Benincasa h... [more]
TYK29645.10.0e+0093.64putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumi... [more]
BLAST of CsaV3_4G002430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4K1B11.1e-11939.53Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Arabidops... [more]
A2Y0402.0e-10237.18Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sat... [more]
Q6AVZ91.3e-10137.03Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sat... [more]
Q8IXW53.1e-1024.66Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Homo sapiens OX=9... [more]
Q5RA375.3e-1024.66Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Pongo abelii OX=9... [more]
BLAST of CsaV3_4G002430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVU30.0e+00100.00RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis sativus OX... [more]
A0A1S3BXZ90.0e+0093.35RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo OX=36... [more]
A0A5A7TQX70.0e+0093.20RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. ... [more]
A0A5D3E2V90.0e+0093.64RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. ... [more]
A0A6J1GWL90.0e+0084.44RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucurbita moschata... [more]
BLAST of CsaV3_4G002430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G26760.27.6e-12139.53unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 ... [more]
AT5G26760.18.3e-7541.08unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007308Rtr1/RPAP2 domainPFAMPF04181RPAP2_Rtr1coord: 36..108
e-value: 1.2E-22
score: 80.0
IPR007308Rtr1/RPAP2 domainPROSITEPS51479ZF_RTR1coord: 32..117
score: 20.796621
IPR038534Rtr1/RPAP2 domain superfamilyGENE3D1.25.40.820coord: 2..147
e-value: 9.4E-30
score: 105.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..455
IPR039693Rtr1/RPAP2PANTHERPTHR14732UNCHARACTERIZEDcoord: 6..655

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G002430.1CsaV3_4G002430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain
molecular_function GO:0043175 RNA polymerase core enzyme binding
molecular_function GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity