CsaV3_4G001840 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G001840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	SAM domain-containing protein
Location	chr4: 1054595 .. 1055814 (-)
RNA-Seq Expression	CsaV3_4G001840
Synteny	CsaV3_4G001840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATATTTATGTAAGAAATTAAAATTTTTGAATATTGAATTTCACAAGTAAAGAAAAAGAAAAAAGGAAAAAGAGAAGTGTGGTGGTGGTCGTCATCATCATCTTCTTTCTTCTTCTTTATGAAGTATAAAAATGGCGGATCTGTGTGAGACTTTGAAGCAAATTTTGTAAACCAATTCAGAGAGAGAGAGAAAAAAAATGAGAGAAGATCAAATCAAATCAGAGATGGATTGGTTCTCATGGCTTTCAAGAACATCTCTACATCCATCTTTAGTCTACGAATACGGCCTTGCCTTAGCCAACAACGAGCTCGAACACGAAGACATTCTCTATTTCAATCATGAATTCCTCCAAAGCATCGGAATCTCCATAGCCAAACACCGTCTAGAGATTCTTAAGTTGGTTCATAAAGAAAACGCTCTCCACCCTCGTCCCATCACTCGTATTCTCCTCGCTCTCAAGAAAACCAAACGACGGTTCGCAAATCTCATACGAAACTTCACTCATCACGACGATCAATTAGAAGAATCCAAAGCCCTAGTTCTTGTTCCTAAATCAAGTTACGCCGCTAAAATTCTGAAGAGGAACAAGACATTTAGCGTGGGGAAAACGCAGGGGAGGTTTCTTCTTACCAATGGAAGTCCGGATCCTGATGTAAAGATCGGGCGGCGGATTCAACACTTTTCCGGTCCGATCTTGTACGATGCACGGTCGGCGGCGGCGGCAGAGGAGGAGAAGAAGAAGGAGGGCGTTGAGGAAATCAGGTGGGATGCAATGTTTCAGAATTTGAGACCTACTTGAGAATTAAAATTCATGGATTTTGTTAACAAATTAGGGTTAATTTTGAATGGTGAGAGATGGGTTTTTTGTGTTATTCTCTTCCACCATTAGATGGGATTTCTTTGTTTTTTTTTTTTCTTTTTCTTTTTTGGTTTTGGGGAAGTGGTGAGTCTCTAAGGACAAGAAGAAGAGAAGCTTTAGGAAGAAGGAAGGGTTTGATTTTTTAGAATGATGATGATCATTGTGTTCTTTTCTTGAAGATGAATATTTAATTGATGTATGGGTTTATTAGGTTAAGAGGGATATAATTGATTTTGTGTTTTCTTTATGGTAATGTAATCTCTGCCAAACCCAGCTTTTGTTCTTGTGGTTTGAGGTTTCTAATAATCTAATCAATATTACATTTTTCTTACCTCTTCCCTCTTTATTCCTAATCTTTT

mRNA sequence

ATGAGAGAAGATCAAATCAAATCAGAGATGGATTGGTTCTCATGGCTTTCAAGAACATCTCTACATCCATCTTTAGTCTACGAATACGGCCTTGCCTTAGCCAACAACGAGCTCGAACACGAAGACATTCTCTATTTCAATCATGAATTCCTCCAAAGCATCGGAATCTCCATAGCCAAACACCGTCTAGAGATTCTTAAGTTGGTTCATAAAGAAAACGCTCTCCACCCTCGTCCCATCACTCGTATTCTCCTCGCTCTCAAGAAAACCAAACGACGGTTCGCAAATCTCATACGAAACTTCACTCATCACGACGATCAATTAGAAGAATCCAAAGCCCTAGTTCTTGTTCCTAAATCAAGTTACGCCGCTAAAATTCTGAAGAGGAACAAGACATTTAGCGTGGGGAAAACGCAGGGGAGGTTTCTTCTTACCAATGGAAGTCCGGATCCTGATGTAAAGATCGGGCGGCGGATTCAACACTTTTCCGGTCCGATCTTGTACGATGCACGGTCGGCGGCGGCGGCAGAGGAGGAGAAGAAGAAGGAGGGCGTTGAGGAAATCAGGTGGGATGCAATGTTTCAGAATTTGAGACCTACTTGA

Coding sequence (CDS)

ATGAGAGAAGATCAAATCAAATCAGAGATGGATTGGTTCTCATGGCTTTCAAGAACATCTCTACATCCATCTTTAGTCTACGAATACGGCCTTGCCTTAGCCAACAACGAGCTCGAACACGAAGACATTCTCTATTTCAATCATGAATTCCTCCAAAGCATCGGAATCTCCATAGCCAAACACCGTCTAGAGATTCTTAAGTTGGTTCATAAAGAAAACGCTCTCCACCCTCGTCCCATCACTCGTATTCTCCTCGCTCTCAAGAAAACCAAACGACGGTTCGCAAATCTCATACGAAACTTCACTCATCACGACGATCAATTAGAAGAATCCAAAGCCCTAGTTCTTGTTCCTAAATCAAGTTACGCCGCTAAAATTCTGAAGAGGAACAAGACATTTAGCGTGGGGAAAACGCAGGGGAGGTTTCTTCTTACCAATGGAAGTCCGGATCCTGATGTAAAGATCGGGCGGCGGATTCAACACTTTTCCGGTCCGATCTTGTACGATGCACGGTCGGCGGCGGCGGCAGAGGAGGAGAAGAAGAAGGAGGGCGTTGAGGAAATCAGGTGGGATGCAATGTTTCAGAATTTGAGACCTACTTGA

Protein sequence

MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEKKKEGVEEIRWDAMFQNLRPT*

Homology

[Close]

BLAST of CsaV3_4G001840 vs. NCBI nr
Match: XP_004152186.1 (uncharacterized protein LOC101211300 [Cucumis sativus] >KGN52924.1 hypothetical protein Csa_015012 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 6.1e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNLRPT
Sbjct: 181 KKEGVEEIRWDAMFQNLRPT 200

[Close]

BLAST of CsaV3_4G001840 vs. NCBI nr
Match: KAA0044466.1 (uncharacterized protein E6C27_scaffold46G002020 [Cucumis melo var. makuwa])

HSP 1 Score: 387.1 bits (993), Expect = 9.2e-104
Identity = 193/200 (96.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLS+TSLHPSLVYEYGLALANNELE+EDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSKTSLHPSLVYEYGLALANNELEYEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLV KENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVRKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPD DVKIGRRIQHFSGPILYD RS+AAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDHDVKIGRRIQHFSGPILYDVRSSAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNL+PT
Sbjct: 181 KKEGVEEIRWDAMFQNLKPT 200

[Close]

BLAST of CsaV3_4G001840 vs. NCBI nr
Match: XP_008454194.1 (PREDICTED: uncharacterized protein LOC103494673 [Cucumis melo] >TYK29593.1 uncharacterized protein E5676_scaffold655G002020 [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 3.5e-103
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLS+TSLHPSLVYEYGLALANNELE+EDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSKTSLHPSLVYEYGLALANNELEYEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLV KENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVRKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPD DV IGRRIQHFSGPILYD RS+AAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDHDVNIGRRIQHFSGPILYDVRSSAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNL+PT
Sbjct: 181 KKEGVEEIRWDAMFQNLKPT 200

[Close]

BLAST of CsaV3_4G001840 vs. NCBI nr
Match: XP_038900622.1 (uncharacterized protein LOC120087790 [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 160/192 (83.33%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69
           MDWFSWLS+T+LHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKL 
Sbjct: 1   MDWFSWLSKTTLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60

Query: 70  HKENALHPRPITRILLALKKTKRRFANLIRNFT-HHDDQLEESKALVLVPKSSYAAKILK 129
            K+NALHPRPITR+LLALKKTKRRF+NLIRNFT HH DQL++SKALVLVPKSSYAAK LK
Sbjct: 61  RKDNALHPRPITRLLLALKKTKRRFSNLIRNFTHHHHDQLDDSKALVLVPKSSYAAKFLK 120

Query: 130 RNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEKKKEGVEEI 189
           RNKTFSVGK QGRFLLTNGSPDP V I  RIQ FSGPILYD    A  ++++K++GVEEI
Sbjct: 121 RNKTFSVGKPQGRFLLTNGSPDPGV-IWPRIQTFSGPILYD--FPAEEKKKEKEDGVEEI 180

Query: 190 RWDAMFQNLRPT 201
           RWDAMFQ+L+PT
Sbjct: 181 RWDAMFQDLKPT 189

[Close]

BLAST of CsaV3_4G001840 vs. NCBI nr
Match: XP_022998747.1 (uncharacterized protein LOC111493318 [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 6.9e-67
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 0


Query: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69
           MDWFSWLS+T+L PSLVYEYGLAL++NELE EDI+YFNHEFLQSIGISIAKHRLEILKL 
Sbjct: 1   MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLA 60

Query: 70  HKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAAKILKR 129
            K+ ALHPRPITR+LLA+K+TKR FA LIRNF+ HD   ++SKALV+VPKS+Y+ K+LKR
Sbjct: 61  RKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--DDSKALVVVPKSTYSGKLLKR 120

Query: 130 NKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEKK----KEGV 189
           NK   V K QGRFLLTNGSP P V    RI+ FSGP++YD R     EEE++      GV
Sbjct: 121 NKKLMVAKQQGRFLLTNGSPAPGV--WPRIESFSGPLVYDLRRDEKKEEEEEDGYWSNGV 180

Query: 190 EEIRWDAMFQNLRPT 201
           EEIRWD MFQNL+PT
Sbjct: 181 EEIRWDTMFQNLKPT 191

[Close]

BLAST of CsaV3_4G001840 vs. ExPASy TrEMBL
Match: A0A0A0KVK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006310 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.0e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNLRPT
Sbjct: 181 KKEGVEEIRWDAMFQNLRPT 200

[Close]

BLAST of CsaV3_4G001840 vs. ExPASy TrEMBL
Match: A0A5A7TQT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002020 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 193/200 (96.50%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLS+TSLHPSLVYEYGLALANNELE+EDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSKTSLHPSLVYEYGLALANNELEYEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLV KENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVRKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPD DVKIGRRIQHFSGPILYD RS+AAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDHDVKIGRRIQHFSGPILYDVRSSAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNL+PT
Sbjct: 181 KKEGVEEIRWDAMFQNLKPT 200

[Close]

BLAST of CsaV3_4G001840 vs. ExPASy TrEMBL
Match: A0A5D3E0J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002020 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLS+TSLHPSLVYEYGLALANNELE+EDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSKTSLHPSLVYEYGLALANNELEYEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLV KENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVRKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPD DV IGRRIQHFSGPILYD RS+AAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDHDVNIGRRIQHFSGPILYDVRSSAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNL+PT
Sbjct: 181 KKEGVEEIRWDAMFQNLKPT 200

[Close]

BLAST of CsaV3_4G001840 vs. ExPASy TrEMBL
Match: A0A1S3BZ95 (uncharacterized protein LOC103494673 OS=Cucumis melo OX=3656 GN=LOC103494673 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MREDQIKSEMDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAK 60
           MREDQIKSEMDWFSWLS+TSLHPSLVYEYGLALANNELE+EDILYFNHEFLQSIGISIAK
Sbjct: 1   MREDQIKSEMDWFSWLSKTSLHPSLVYEYGLALANNELEYEDILYFNHEFLQSIGISIAK 60

Query: 61  HRLEILKLVHKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120
           HRLEILKLV KENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS
Sbjct: 61  HRLEILKLVRKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKS 120

Query: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEK 180
           SYAAKILKRNKTFSVGKTQGRFLLTNGSPD DV IGRRIQHFSGPILYD RS+AAAEEEK
Sbjct: 121 SYAAKILKRNKTFSVGKTQGRFLLTNGSPDHDVNIGRRIQHFSGPILYDVRSSAAAEEEK 180

Query: 181 KKEGVEEIRWDAMFQNLRPT 201
           KKEGVEEIRWDAMFQNL+PT
Sbjct: 181 KKEGVEEIRWDAMFQNLKPT 200

[Close]

BLAST of CsaV3_4G001840 vs. ExPASy TrEMBL
Match: A0A6J1K8U0 (uncharacterized protein LOC111493318 OS=Cucurbita maxima OX=3661 GN=LOC111493318 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.3e-67
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 0


Query: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69
           MDWFSWLS+T+L PSLVYEYGLAL++NELE EDI+YFNHEFLQSIGISIAKHRLEILKL 
Sbjct: 1   MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLA 60

Query: 70  HKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAAKILKR 129
            K+ ALHPRPITR+LLA+K+TKR FA LIRNF+ HD   ++SKALV+VPKS+Y+ K+LKR
Sbjct: 61  RKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--DDSKALVVVPKSTYSGKLLKR 120

Query: 130 NKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEKK----KEGV 189
           NK   V K QGRFLLTNGSP P V    RI+ FSGP++YD R     EEE++      GV
Sbjct: 121 NKKLMVAKQQGRFLLTNGSPAPGV--WPRIESFSGPLVYDLRRDEKKEEEEEDGYWSNGV 180

Query: 190 EEIRWDAMFQNLRPT 201
           EEIRWD MFQNL+PT
Sbjct: 181 EEIRWDTMFQNLKPT 191

[Close]

BLAST of CsaV3_4G001840 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 95/209 (45.45%), Postives = 134/209 (64.11%), Query Frame = 0


Query: 12  WFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLVHK 71
           WFSWLSRT+L PSL++EYGL+ + NELEHEDI YF+HEFLQS+GISIAKHRLEILKL  +
Sbjct: 5   WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 72  ENALHP----RPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSS------ 131
           +    P    R I+R++ A+KKT++  ++ +R +   +++   S+ALVLVPK +      
Sbjct: 65  DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWIRREEESASSRALVLVPKKTSNGIGK 124

Query: 132 YAAKILKRNKTFSVG-------KTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAA 191
           +    LKRNK   +        + Q R LLTNG+P        RI  FS P+++D     
Sbjct: 125 WRGGFLKRNKRSVMPSNGNGGLEKQERLLLTNGTP-------CRIDSFSSPMVFD----Y 184

Query: 192 AAEEEK---KKEGVEEIRWDAMFQNLRPT 201
           + ++EK   +    E+I+WD+MFQNL+PT
Sbjct: 185 SFKDEKLYAQDTYFEDIKWDSMFQNLKPT 202

[Close]

BLAST of CsaV3_4G001840 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 154.8 bits (390), Expect = 7.1e-38
Identity = 93/206 (45.15%), Postives = 130/206 (63.11%), Query Frame = 0


Query: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69
           MDWFSWLSRT+L  SL+YEYGL+ +NNELE+EDI YFNHEFLQS+GISIAKHRLEILKL 
Sbjct: 1   MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 70  HKENALHP---RPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAA-- 129
            ++    P   R I R+L+A+KKT + F+  +R +   +   E S+ALV+V +S+ ++  
Sbjct: 61  RRDRKPSPLTARSIFRVLIAIKKTGKCFSEHVRAWIRRE---ESSRALVVVSRSTSSSGN 120

Query: 130 ---KILKRNKTFSVGKTQG----RFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAE 189
              K  ++ +        G    R LLTNG+P        R+  FS P +    S+   +
Sbjct: 121 GRWKSARKKRLVMPSNGNGVKEERLLLTNGTP-------CRLDSFSNPKV----SSGYED 180

Query: 190 EEK---KKEGVEEIRWDAMFQNLRPT 201
           ++     K+  E+I+WD+MFQNL+PT
Sbjct: 181 DDNHWGNKDVEEKIKWDSMFQNLKPT 192

[Close]

BLAST of CsaV3_4G001840 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 8.8e-20
Identity = 72/256 (28.12%), Postives = 116/256 (45.31%), Query Frame = 0


Query: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69
           MDWFSWLS+T L P+L YEYGL  A  +L+ EDI  FNH FL+ +G+++ KHR+EILKL 
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 70  HKE----NALHPRPIT-RILLALKKTKRRFANLIRNF----------------------- 129
            +E    ++ + RP++ +++  + K  +   N +  +                       
Sbjct: 61  KRETQALSSYNHRPVSAKLISVVIKATKSVGNRLNKWLSLGGTAVVEPLKEKQSPPPAYR 120

Query: 130 -----THHDDQLEESKALVLVPKSSYAAKILKRNKTFSVG-------------------- 189
                T +++++   KA+V V +      ++KR +    G                    
Sbjct: 121 TGAFLTGNNNKVNAEKAVVQVER----LPVIKRKRIVKSGPLDRNHGIQEKMTLVSNRSM 180

Query: 190 --------KTQGRFLLTNGSP----DPDVKIGRRIQHFSGPILYDARSAAAAEEEKKKEG 201
                     Q R +L   SP      D  +  R++  SGP+     S +   E  K++ 
Sbjct: 181 NLSGPLDRSVQERLILAYRSPIVSGQLDGNLNERLR-LSGPLKGRPPSPSVYVEYNKRD- 240

The following BLAST results are available for this feature:

BLAST of CsaV3_4G001840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152186.1	6.1e-108	100.00	uncharacterized protein LOC101211300 [Cucumis sativus] >KGN52924.1 hypothetical ...	[more]
KAA0044466.1	9.2e-104	96.50	uncharacterized protein E6C27_scaffold46G002020 [Cucumis melo var. makuwa]	[more]
XP_008454194.1	3.5e-103	96.00	PREDICTED: uncharacterized protein LOC103494673 [Cucumis melo] >TYK29593.1 uncha...	[more]
XP_038900622.1	1.7e-81	83.33	uncharacterized protein LOC120087790 [Benincasa hispida]	[more]
XP_022998747.1	6.9e-67	69.74	uncharacterized protein LOC111493318 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G001840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G001840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVK9	3.0e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006310 PE=4 SV=1	[more]
A0A5A7TQT5	4.4e-104	96.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E0J4	1.7e-103	96.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BZ95	1.7e-103	96.00	uncharacterized protein LOC103494673 OS=Cucumis melo OX=3656 GN=LOC103494673 PE=...	[more]
A0A6J1K8U0	3.3e-67	69.74	uncharacterized protein LOC111493318 OS=Cucurbita maxima OX=3661 GN=LOC111493318...	[more]

BLAST of CsaV3_4G001840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15760.1	1.5e-40	45.45	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G80520.1	7.1e-38	45.15	Sterile alpha motif (SAM) domain-containing protein	[more]
AT2G12462.1	8.8e-20	28.13	BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 8..76 e-value: 1.1E-7 score: 33.3
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 15..72
None	No IPR available	PANTHER	PTHR33915:SF1	OSJNBA0033G05.11 PROTEIN	coord: 10..200
None	No IPR available	PANTHER	PTHR33915	OSJNBA0033G05.11 PROTEIN	coord: 10..200
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 11..71 e-value: 3.64423E-6 score: 41.0709

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G001840.1	CsaV3_4G001840.1	mRNA