CsaV3_4G001560 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G001560
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description26.5 kDa heat shock protein
Locationchr4: 880036 .. 880668 (+)
RNA-Seq ExpressionCsaV3_4G001560
SyntenyCsaV3_4G001560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTCACCCGTTTGGCTCTAAGGAATTTGCAGCAAAGGGCTGCCTTTGCTTCCTCTCCTGTTGATACTTTATTTCCCAAACAAACTGCAGCCCTGATTAGAAGATTGAGTGATCAGAGCTCAGAAGGAAATTCCAAAGAGATCGCCGTTAAGAATGAAGAGAACACCAAAATAGCCCCGAAAAGGGAAGGCAAGAAATGGGTACCATGGAGAAAGAACGAGGGGGAGTTTCATCTAGGAAACTCACTGATGCAAGCAGCAGAGCATATAAACAGAGTGCTGAAAAGCTTGAACTTGAGTCGTCCATGGTGGGTCTCCGGTGGCCGTGTGAAAGAGCAAGAAGATTGGTACAAACTGCGAGTGGAGATGCCTGGGATCGCTAAAGATGAAGTGAAGGTGACAGTGGAAGGTAGGATGCTGAACATCAGAGGAGAGCACAGGGAAGAAGAGGAAGAAGAAGAAGACGAAGGATTTGCAGAGAGTTATGGCTACTATGAAAGCACGGTGATGCTGCCGGAAGACGCGGTGGCGGAGGAGATCAAAGCGGAGTTGAAAGATGGGGTTTTGACGATCACCATTCCGAGGACTGAGAAGCCTCCAAAGGATGTTAAAGAGATCACCGTTGTGTGA

mRNA sequence

ATGGCCCTCACCCGTTTGGCTCTAAGGAATTTGCAGCAAAGGGCTGCCTTTGCTTCCTCTCCTGTTGATACTTTATTTCCCAAACAAACTGCAGCCCTGATTAGAAGATTGAGTGATCAGAGCTCAGAAGGAAATTCCAAAGAGATCGCCGTTAAGAATGAAGAGAACACCAAAATAGCCCCGAAAAGGGAAGGCAAGAAATGGGTACCATGGAGAAAGAACGAGGGGGAGTTTCATCTAGGAAACTCACTGATGCAAGCAGCAGAGCATATAAACAGAGTGCTGAAAAGCTTGAACTTGAGTCGTCCATGGTGGGTCTCCGGTGGCCGTGTGAAAGAGCAAGAAGATTGGTACAAACTGCGAGTGGAGATGCCTGGGATCGCTAAAGATGAAGTGAAGGTGACAGTGGAAGGTAGGATGCTGAACATCAGAGGAGAGCACAGGGAAGAAGAGGAAGAAGAAGAAGACGAAGGATTTGCAGAGAGTTATGGCTACTATGAAAGCACGGTGATGCTGCCGGAAGACGCGGTGGCGGAGGAGATCAAAGCGGAGTTGAAAGATGGGGTTTTGACGATCACCATTCCGAGGACTGAGAAGCCTCCAAAGGATGTTAAAGAGATCACCGTTGTGTGA

Coding sequence (CDS)

ATGGCCCTCACCCGTTTGGCTCTAAGGAATTTGCAGCAAAGGGCTGCCTTTGCTTCCTCTCCTGTTGATACTTTATTTCCCAAACAAACTGCAGCCCTGATTAGAAGATTGAGTGATCAGAGCTCAGAAGGAAATTCCAAAGAGATCGCCGTTAAGAATGAAGAGAACACCAAAATAGCCCCGAAAAGGGAAGGCAAGAAATGGGTACCATGGAGAAAGAACGAGGGGGAGTTTCATCTAGGAAACTCACTGATGCAAGCAGCAGAGCATATAAACAGAGTGCTGAAAAGCTTGAACTTGAGTCGTCCATGGTGGGTCTCCGGTGGCCGTGTGAAAGAGCAAGAAGATTGGTACAAACTGCGAGTGGAGATGCCTGGGATCGCTAAAGATGAAGTGAAGGTGACAGTGGAAGGTAGGATGCTGAACATCAGAGGAGAGCACAGGGAAGAAGAGGAAGAAGAAGAAGACGAAGGATTTGCAGAGAGTTATGGCTACTATGAAAGCACGGTGATGCTGCCGGAAGACGCGGTGGCGGAGGAGATCAAAGCGGAGTTGAAAGATGGGGTTTTGACGATCACCATTCCGAGGACTGAGAAGCCTCCAAAGGATGTTAAAGAGATCACCGTTGTGTGA

Protein sequence

MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIAPKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPKDVKEITVV*
Homology
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BLAST of CsaV3_4G001560 vs. NCBI nr
Match: XP_004152349.1 (26.5 kDa heat shock protein, mitochondrial [Cucumis sativus] >KGN52891.1 hypothetical protein Csa_014496 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIA 60
           MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIA
Sbjct: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIA 60

Query: 61  PKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKL 120
           PKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKL
Sbjct: 61  PKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKL 120

Query: 121 RVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEE 180
           RVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEE
Sbjct: 121 RVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEE 180

Query: 181 IKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           IKAELKDGVLTITIPRTEKPPKDVKEITVV
Sbjct: 181 IKAELKDGVLTITIPRTEKPPKDVKEITVV 210

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BLAST of CsaV3_4G001560 vs. NCBI nr
Match: XP_008454491.1 (PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Cucumis melo] >KAA0044442.1 26.5 kDa heat shock protein [Cucumis melo var. makuwa] >TYK29569.1 26.5 kDa heat shock protein [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 201/211 (95.26%), Postives = 204/211 (96.68%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLALRNLQQRAAF SSPVDTL PKQTAALIRR  DQSSEGNSKEIAVKNEE NTKI
Sbjct: 1   MALTRLALRNLQQRAAFVSSPVDTLLPKQTAALIRRFCDQSSEGNSKEIAVKNEEKNTKI 60

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
           APKREGKKW+PWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWW SGG VKEQEDWYK
Sbjct: 61  APKREGKKWIPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWFSGGHVKEQEDWYK 120

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LR+EMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEE+EGFAESYGYYESTVMLPEDAVAE
Sbjct: 121 LRMEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEEEGFAESYGYYESTVMLPEDAVAE 180

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTEKPPKDVKEITVV
Sbjct: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211

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BLAST of CsaV3_4G001560 vs. NCBI nr
Match: XP_038899919.1 (26.5 kDa heat shock protein, mitochondrial [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 180/211 (85.31%), Postives = 191/211 (90.52%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLAL+NLQQRAA  SSP D L P++T ALIRRL DQSSE N KEI VK+E+ N KI
Sbjct: 1   MALTRLALKNLQQRAALVSSPADALLPRRTEALIRRLCDQSSEVNPKEITVKDEDRNPKI 60

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
            PKRE KKW PWRKN GEFHLGNSLMQAAE++NRVLKSLNLSRPWWVSGGRVKEQEDWYK
Sbjct: 61  VPKRESKKWAPWRKNGGEFHLGNSLMQAAENLNRVLKSLNLSRPWWVSGGRVKEQEDWYK 120

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LRVEMPGIAK+EVKVTVEGR+LNIRGEHREEEEEEE+  FAESYGYYESTVMLPEDAVA+
Sbjct: 121 LRVEMPGIAKEEVKVTVEGRILNIRGEHREEEEEEEE--FAESYGYYESTVMLPEDAVAD 180

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPR EKP KDVKEITVV
Sbjct: 181 EIKAELKDGVLTITIPRAEKPSKDVKEITVV 209

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BLAST of CsaV3_4G001560 vs. NCBI nr
Match: XP_022979416.1 (26.5 kDa heat shock protein, mitochondrial [Cucurbita maxima])

HSP 1 Score: 305.4 bits (781), Expect = 3.7e-79
Identity = 161/211 (76.30%), Postives = 179/211 (84.83%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLAL+NLQQR A  SSP D+L  ++T ALIRR  DQSSEGN KE+A+ NE+ NTK+
Sbjct: 1   MALTRLALKNLQQR-ALVSSPADSLLHRRTEALIRRFCDQSSEGNPKEVAINNEDKNTKM 60

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
            PK EGKKWV W+KN  EF +GNSLMQAAE+INRVLKSL L RPWWVS G VKEQE+WYK
Sbjct: 61  VPKGEGKKWVLWKKNGREFDVGNSLMQAAENINRVLKSLKLRRPWWVSSGHVKEQEEWYK 120

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LRVEMPGI K++VKV VEGR+L+IRGEH EE+EEEE     E YGYYESTVMLPEDAVA+
Sbjct: 121 LRVEMPGIGKEDVKVRVEGRILSIRGEHSEEDEEEESGWSGERYGYYESTVMLPEDAVAD 180

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTE PPKDVKEITVV
Sbjct: 181 EIKAELKDGVLTITIPRTEMPPKDVKEITVV 210

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BLAST of CsaV3_4G001560 vs. NCBI nr
Match: KAG6581923.1 (26.5 kDa heat shock protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 161/211 (76.30%), Postives = 178/211 (84.36%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLAL+NLQQR A  SS  D L  +QT ALIRR  DQSSEGN KE+A+ NE+ NTK+
Sbjct: 80  MALTRLALKNLQQR-ALVSSSADALLHRQTEALIRRFCDQSSEGNPKEVAINNEDKNTKM 139

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
            PK EGKKWV W+KN  EF +GNSLMQAAE+INRVLKSL L RPWWVS G VKEQE+WYK
Sbjct: 140 VPKGEGKKWVLWKKNGREFDVGNSLMQAAENINRVLKSLKLRRPWWVSNGHVKEQEEWYK 199

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           L+VEMPGI K++VKV VEGR+L+IRGEHREE+EEEE     E YGYYESTVMLPEDAVA+
Sbjct: 200 LKVEMPGIRKEDVKVRVEGRILSIRGEHREEDEEEESGWRGERYGYYESTVMLPEDAVAD 259

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTE PPKDVKEITVV
Sbjct: 260 EIKAELKDGVLTITIPRTEMPPKDVKEITVV 289

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BLAST of CsaV3_4G001560 vs. ExPASy Swiss-Prot
Match: Q9SSQ8 (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP26.5 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.0e-32
Identity = 95/234 (40.60%), Postives = 149/234 (63.68%), Query Frame = 0 

Query: 1   MALTRLALRNLQQR---AAFASSPVDTLF-----PKQTAALIRRLSDQSSEGNSKEIAVK 60
           MAL RLALRNLQQ+   +    S    L      P +    +   + +  +  + E++V 
Sbjct: 1   MALARLALRNLQQKLSPSLMGQSCERGLVGNRHNPMKLNRFMATSAGEQEDKMNTEVSVS 60

Query: 61  NEENTK-IAPKREGKKWVPWRKNE---------GEFH---LGNSLMQAAEHINRVLKSLN 120
            +++ +   P+R G+K + WR  +          EF    +GN+L+QA E++NR+  + N
Sbjct: 61  EKKSPRQNFPRRRGRKSL-WRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFN 120

Query: 121 LSRPWWVSGGRVKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEE---EED 180
           ++ P+ +  G+VKEQ+D YKLR E+PG+ K++VK+TV   +L I+G+H+ EEE+   EED
Sbjct: 121 VN-PFQLM-GQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEED 180

Query: 181 EGF-AESYGYYESTVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPKDVKEITV 210
           E + ++SYGYY +++ LP+DA  E+IKAELK+GVL + IPRTEKP K+V+EI+V
Sbjct: 181 EYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISV 231

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BLAST of CsaV3_4G001560 vs. ExPASy Swiss-Prot
Match: B7EZJ7 (23.6 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.6 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.5e-19
Identity = 71/202 (35.15%), Postives = 113/202 (55.94%), Query Frame = 0 

Query: 11  LQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIAPKREGKKWVP 70
           L  RA F+S+  D       AA     +    +G+S+E+AV +    +  P R+ + +VP
Sbjct: 39  LNFRALFSSAGAD------AAATTGGCAPAKGDGHSREVAVVDRSRRR-WPWRDLRDFVP 98

Query: 71  WRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKLRVEMPGIAKD 130
            R  +G   +G++L Q AE + R L             G+V+E E+ Y+LR E+PG+ KD
Sbjct: 99  LRLVDG---IGSALSQVAETLTRPLT------------GKVREDEERYRLRFEVPGLGKD 158

Query: 131 EVKVTVEGRMLNIRGEHR---EEEEEEEDEGFAESYGYYESTVMLPEDAVAEEIKAELKD 190
           +V+V V+  +L I GE R   EE+   + +G   +   Y + ++LPEDAVAE I AE++D
Sbjct: 159 DVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECWAAATYHAGLLLPEDAVAEGITAEVRD 218

Query: 191 GVLTITIPRTEKPPKDVKEITV 210
           GVL +T+PR+ +  + V E+ V
Sbjct: 219 GVLHVTVPRSPERKRSVTEVKV 218

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BLAST of CsaV3_4G001560 vs. ExPASy Swiss-Prot
Match: Q95661 (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 44/111 (39.64%), Postives = 73/111 (65.77%), Query Frame = 0 

Query: 92  NRVLKSLNLSRPWWVSGGRVKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEE 151
           NR   +  +  PW      + + E+  K+R +MPG++K++VKV+VE  ML I+GEH++EE
Sbjct: 123 NRASGTGEIRTPW-----DIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEE 182

Query: 152 EEEEDEGFAESYGYYESTVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPK 203
           +  +   +  +Y  Y++ + LP++ V ++IKAELK+GVL I+IP+TE   K
Sbjct: 183 DGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKK 228

[Close]
BLAST of CsaV3_4G001560 vs. ExPASy Swiss-Prot
Match: P30222 (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-14
Identity = 42/97 (43.30%), Postives = 71/97 (73.20%), Query Frame = 0 

Query: 111 VKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTV 170
           +K+ E+  K+R +MPG++K+EVKV+VE  +L I+GEH+ +EE  +D+ +  +Y  Y++ +
Sbjct: 144 IKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHK-KEESGKDDSWGRNYSSYDTRL 203

Query: 171 MLPEDAVAEEIKAELKDGVLTITIPRT--EKPPKDVK 206
            LP++   +++KAELK+GVL I+IP+T  EK   DV+
Sbjct: 204 SLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVE 239

[Close]
BLAST of CsaV3_4G001560 vs. ExPASy Swiss-Prot
Match: P09887 (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.6e-14
Identity = 44/123 (35.77%), Postives = 78/123 (63.41%), Query Frame = 0 

Query: 83  SLMQAAEHINRVLKSLNLSRPWWVSGGR------VKEQEDWYKLRVEMPGIAKDEVKVTV 142
           S+ Q  + ++RV +         + GG       +K++E   ++R +MPG+AK++VKV+V
Sbjct: 48  SMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSV 107

Query: 143 EGRMLNIRGEHREEEEEEEDEGF-AESYGYYESTVMLPEDAVAEEIKAELKDGVLTITIP 199
           E  ML I+G H+ E+E   D+ + + +Y  Y++ + LP++   +++KAELK+GVL ITIP
Sbjct: 108 EDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIP 167

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BLAST of CsaV3_4G001560 vs. ExPASy TrEMBL
Match: A0A0A0KYF8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G005000 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIA 60
           MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIA
Sbjct: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEENTKIA 60

Query: 61  PKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKL 120
           PKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKL
Sbjct: 61  PKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYKL 120

Query: 121 RVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEE 180
           RVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEE
Sbjct: 121 RVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAEE 180

Query: 181 IKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           IKAELKDGVLTITIPRTEKPPKDVKEITVV
Sbjct: 181 IKAELKDGVLTITIPRTEKPPKDVKEITVV 210

[Close]
BLAST of CsaV3_4G001560 vs. ExPASy TrEMBL
Match: A0A5A7TMA9 (26.5 kDa heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001750 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.5e-105
Identity = 201/211 (95.26%), Postives = 204/211 (96.68%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLALRNLQQRAAF SSPVDTL PKQTAALIRR  DQSSEGNSKEIAVKNEE NTKI
Sbjct: 1   MALTRLALRNLQQRAAFVSSPVDTLLPKQTAALIRRFCDQSSEGNSKEIAVKNEEKNTKI 60

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
           APKREGKKW+PWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWW SGG VKEQEDWYK
Sbjct: 61  APKREGKKWIPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWFSGGHVKEQEDWYK 120

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LR+EMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEE+EGFAESYGYYESTVMLPEDAVAE
Sbjct: 121 LRMEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEEEGFAESYGYYESTVMLPEDAVAE 180

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTEKPPKDVKEITVV
Sbjct: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211

[Close]
BLAST of CsaV3_4G001560 vs. ExPASy TrEMBL
Match: A0A1S3BYA0 (26.5 kDa heat shock protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494889 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.5e-105
Identity = 201/211 (95.26%), Postives = 204/211 (96.68%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLALRNLQQRAAF SSPVDTL PKQTAALIRR  DQSSEGNSKEIAVKNEE NTKI
Sbjct: 1   MALTRLALRNLQQRAAFVSSPVDTLLPKQTAALIRRFCDQSSEGNSKEIAVKNEEKNTKI 60

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
           APKREGKKW+PWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWW SGG VKEQEDWYK
Sbjct: 61  APKREGKKWIPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWFSGGHVKEQEDWYK 120

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LR+EMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEE+EGFAESYGYYESTVMLPEDAVAE
Sbjct: 121 LRMEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEEEGFAESYGYYESTVMLPEDAVAE 180

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTEKPPKDVKEITVV
Sbjct: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211

[Close]
BLAST of CsaV3_4G001560 vs. ExPASy TrEMBL
Match: A0A6J1IQQ6 (26.5 kDa heat shock protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479146 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.8e-79
Identity = 161/211 (76.30%), Postives = 179/211 (84.83%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLAL+NLQQR A  SSP D+L  ++T ALIRR  DQSSEGN KE+A+ NE+ NTK+
Sbjct: 1   MALTRLALKNLQQR-ALVSSPADSLLHRRTEALIRRFCDQSSEGNPKEVAINNEDKNTKM 60

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
            PK EGKKWV W+KN  EF +GNSLMQAAE+INRVLKSL L RPWWVS G VKEQE+WYK
Sbjct: 61  VPKGEGKKWVLWKKNGREFDVGNSLMQAAENINRVLKSLKLRRPWWVSSGHVKEQEEWYK 120

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LRVEMPGI K++VKV VEGR+L+IRGEH EE+EEEE     E YGYYESTVMLPEDAVA+
Sbjct: 121 LRVEMPGIGKEDVKVRVEGRILSIRGEHSEEDEEEESGWSGERYGYYESTVMLPEDAVAD 180

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTE PPKDVKEITVV
Sbjct: 181 EIKAELKDGVLTITIPRTEMPPKDVKEITVV 210

[Close]
BLAST of CsaV3_4G001560 vs. ExPASy TrEMBL
Match: A0A6J1GVM4 (26.5 kDa heat shock protein, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457576 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.8e-79
Identity = 161/211 (76.30%), Postives = 178/211 (84.36%), Query Frame = 0 

Query: 1   MALTRLALRNLQQRAAFASSPVDTLFPKQTAALIRRLSDQSSEGNSKEIAVKNEE-NTKI 60
           MALTRLAL+NLQQR A  SS  D L  +QT ALIRR  DQSSEGN KE+A+ NE+ NTK+
Sbjct: 80  MALTRLALKNLQQR-ALVSSSADALLHRQTEALIRRFCDQSSEGNPKEVAINNEDKNTKM 139

Query: 61  APKREGKKWVPWRKNEGEFHLGNSLMQAAEHINRVLKSLNLSRPWWVSGGRVKEQEDWYK 120
            PK EGK+WV W+KN  EF +GNSLMQAAE+INRVLKSLNL RPWWVSGG VKEQE+WYK
Sbjct: 140 VPKGEGKRWVLWKKNGREFDVGNSLMQAAENINRVLKSLNLRRPWWVSGGHVKEQEEWYK 199

Query: 121 LRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTVMLPEDAVAE 180
           LRVEMPGI K++VKV VEGR+L+IRGEH EE+EEEE       YGYYESTVMLPEDAVA+
Sbjct: 200 LRVEMPGIRKEDVKVRVEGRILSIRGEHSEEDEEEESGWRGGRYGYYESTVMLPEDAVAD 259

Query: 181 EIKAELKDGVLTITIPRTEKPPKDVKEITVV 211
           EIKAELKDGVLTITIPRTE PPKDVKEITVV
Sbjct: 260 EIKAELKDGVLTITIPRTEMPPKDVKEITVV 289

[Close]
BLAST of CsaV3_4G001560 vs. TAIR 10
Match: AT1G52560.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33
Identity = 93/227 (40.97%), Postives = 147/227 (64.76%), Query Frame = 0 

Query: 1   MALTRLALRNLQQR---AAFASSPVDTLF-----PKQTAALIRRLSDQSSEGNSKEIAVK 60
           MAL RLALRNLQQ+   +    S    L      P +    +   + +  +  + E++V 
Sbjct: 1   MALARLALRNLQQKLSPSLMGQSCERGLVGNRHNPMKLNRFMATSAGEQEDKMNTEVSVS 60

Query: 61  NEENTK-IAPKREGKKWVPWRKNEGEFHL-----GNSLMQAAEHINRVLKSLNLSRPWWV 120
            +++ +   P+R G+K + WR  +   +      GN+L+QA E++NR+  + N++ P+ +
Sbjct: 61  EKKSPRQNFPRRRGRKSL-WRNTDDHGYFTPTLNGNTLIQATENMNRIFDNFNVN-PFQL 120

Query: 121 SGGRVKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEE---EEDEGF-AES 180
             G+VKEQ+D YKLR E+PG+ K++VK+TV   +L I+G+H+ EEE+   EEDE + ++S
Sbjct: 121 M-GQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKS 180

Query: 181 YGYYESTVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPKDVKEITV 210
           YGYY +++ LP+DA  E+IKAELK+GVL + IPRTEKP K+V+EI+V
Sbjct: 181 YGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISV 224

[Close]
BLAST of CsaV3_4G001560 vs. TAIR 10
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.3e-33
Identity = 95/234 (40.60%), Postives = 149/234 (63.68%), Query Frame = 0 

Query: 1   MALTRLALRNLQQR---AAFASSPVDTLF-----PKQTAALIRRLSDQSSEGNSKEIAVK 60
           MAL RLALRNLQQ+   +    S    L      P +    +   + +  +  + E++V 
Sbjct: 1   MALARLALRNLQQKLSPSLMGQSCERGLVGNRHNPMKLNRFMATSAGEQEDKMNTEVSVS 60

Query: 61  NEENTK-IAPKREGKKWVPWRKNE---------GEFH---LGNSLMQAAEHINRVLKSLN 120
            +++ +   P+R G+K + WR  +          EF    +GN+L+QA E++NR+  + N
Sbjct: 61  EKKSPRQNFPRRRGRKSL-WRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFN 120

Query: 121 LSRPWWVSGGRVKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEE---EED 180
           ++ P+ +  G+VKEQ+D YKLR E+PG+ K++VK+TV   +L I+G+H+ EEE+   EED
Sbjct: 121 VN-PFQLM-GQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEED 180

Query: 181 EGF-AESYGYYESTVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPKDVKEITV 210
           E + ++SYGYY +++ LP+DA  E+IKAELK+GVL + IPRTEKP K+V+EI+V
Sbjct: 181 EYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISV 231

[Close]
BLAST of CsaV3_4G001560 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 )

HSP 1 Score: 71.6 bits (174), Expect = 8.3e-13
Identity = 37/88 (42.05%), Postives = 63/88 (71.59%), Query Frame = 0 

Query: 111 VKEQEDWYKLRVEMPGIAKDEVKVTVEGRMLNIRGEHREEEEEEEDEGFAESYGYYESTV 170
           +KE+E   K+R +MPG++K++VK++VE  +L I+GE ++E+ ++   G   S   Y + +
Sbjct: 131 IKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSG--RSVSSYGTRL 190

Query: 171 MLPEDAVAEEIKAELKDGVLTITIPRTE 199
            LP++   ++IKAELK+GVL ITIP+T+
Sbjct: 191 QLPDNCEKDKIKAELKNGVLFITIPKTK 216

[Close]
BLAST of CsaV3_4G001560 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 0 

Query: 112 KEQEDWYKLRVEMPGIAKDEVKVTVE-GRMLNIRGEHREEEEEEEDE--GFAESYGYYES 171
           +E  + +  + ++PG+ K+EVKV VE G +L I GE   E EE+ D+      S G +  
Sbjct: 55  RETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTR 114

Query: 172 TVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPKDVKEITV 210
              LPE+A  EEIKA +++GVL++T+P+  +   +VK I +
Sbjct: 115 RFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDI 155

[Close]
BLAST of CsaV3_4G001560 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10
Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 0 

Query: 112 KEQEDWYKLRVEMPGIAKDEVKVTVE-GRMLNIRGEHREEEEEEED--EGFAESYGYYES 171
           +E  + +  + ++PG+ K+EVKV VE G +L I GE   E EE+ D       S G +  
Sbjct: 54  RETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMR 113

Query: 172 TVMLPEDAVAEEIKAELKDGVLTITIPRTEKPPKDVKEITV 210
              LPE+A  EE+KA +++GVL++T+P+ ++   +VK + +
Sbjct: 114 RFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDI 154

The following BLAST results are available for this feature:
BLAST of CsaV3_4G001560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152349.12.4e-110100.0026.5 kDa heat shock protein, mitochondrial [Cucumis sativus] >KGN52891.1 hypothe... [more]
XP_008454491.11.1e-10495.26PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Cucumis melo] >KAA0044442... [more]
XP_038899919.11.2e-9085.3126.5 kDa heat shock protein, mitochondrial [Benincasa hispida][more]
XP_022979416.13.7e-7976.3026.5 kDa heat shock protein, mitochondrial [Cucurbita maxima][more]
KAG6581923.11.1e-7876.3026.5 kDa heat shock protein, mitochondrial, partial [Cucurbita argyrosperma subs... [more]
BLAST of CsaV3_4G001560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SSQ86.0e-3240.6026.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HS... [more]
B7EZJ74.5e-1935.1523.6 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica OX=39... [more]
Q956611.3e-1539.64Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21... [more]
P302225.6e-1443.30Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2... [more]
P098879.6e-1435.77Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP... [more]
BLAST of CsaV3_4G001560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYF81.1e-110100.00SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G005000 PE=3 S... [more]
A0A5A7TMA95.5e-10595.2626.5 kDa heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3BYA05.5e-10595.2626.5 kDa heat shock protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1034948... [more]
A0A6J1IQQ61.8e-7976.3026.5 kDa heat shock protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GVM46.8e-7976.3026.5 kDa heat shock protein, mitochondrial isoform X1 OS=Cucurbita moschata OX=3... [more]
BLAST of CsaV3_4G001560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52560.21.5e-3340.97HSP20-like chaperones superfamily protein [more]
AT1G52560.14.3e-3340.60HSP20-like chaperones superfamily protein [more]
AT4G27670.18.3e-1342.05heat shock protein 21 [more]
AT1G53540.11.3e-1037.62HSP20-like chaperones superfamily protein [more]
AT3G46230.11.7e-1035.64heat shock protein 17.4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 111..209
e-value: 1.5E-24
score: 86.1
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 95..210
score: 24.059877
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 82..210
e-value: 1.3E-28
score: 101.3
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 97..208
NoneNo IPR availablePANTHERPTHR11527:SF29626.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIALcoord: 43..209
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 111..196
e-value: 1.58341E-23
score: 87.9948
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 43..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G001560.1CsaV3_4G001560.1mRNA