CsaV3_4G001190 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G001190
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	chr4: 687147 .. 690593 (+)
RNA-Seq Expression	CsaV3_4G001190
Synteny	CsaV3_4G001190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCTTTCTAGTAGTGGATCCAATTAACTAAAAGAAAACGAGACAACAAGTAAGTGTATATATGTATATAAATGGTCATAAATTTTGTTCTTCTTTCGCCGCATCTAAAAGGAAGAAAAATGAAAGTTGATTGAATTGACTTCCATGGTTTATTGTGTTCATATATATATTTATATATGTATTGTATTTGATTCATTGATTGATTAAAAATCACAAATTGATTGTCGCAATTTATGAACTGGCGCTGCGTTAAGGTCCTCCATCCAACGCGTCTAAAAGTCCACGTCGGTCCCAAAAAGAACCAAAGGGGTAATTTCGGAAAATCATTCTCAACATCCTTTTTATTTAAAGCTCAAAATCCACAAATGAAGGAAGCAAATCGAAAATTTGACAATACAGACACTCAGTTTTCTTCTTTACAATAAAAACAGAGGAAAACAACAAAGATTGATACGGAAAAATAAGAGAAGAGGATGGAGGAAGTATTTGTATATGTGGAGGAGTTTCCATTTCAAACGTCCTACGACGTTTCGCGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCTCTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATTAAGGTAAAAAGAAAAAAAAACCCCCCCCAAATTATTTTTCTAAACCCATCGATTTCTTCTCCTTTGATTTTTGTTTTAAATTATTTCTGGGTTTTGTTTTTCAGTTTGCTCATAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACGGTTTGTGAAATTTGTCTCCAGGTTCGATTTCTTAAATTGTTTTTTGTTTAAATTTTTGTTTTTGATGTTTGAGTTTCTGGGTCTAATTATTTCCACGAAATATGAAGTGGGTTTCCGTAGATTTTGAACCTTGAAGTCTCTAAACCATTGTTCTGAAGCTCTGTTTCTTGGGATGTGGTTTTTATTTTTAAATTTGGGAAAGGGGAAAGAAGTTTAGGAATTCGTCTTTTTCTTTGAGTTCAAGTCTCTTTCTCTGTGTTTTAAAGTTGAACTTTCAAAATTCCATAAAGTTCTCTTAATTTGCTTTCTTTAACATTTCATTTCAATCTCAATACCTTTTTTTTTCTTCTCATTTATCACTGAAGAAGATTACTGTTTTAATTCAATGAAGATTTTAATGCGTTATTTAATGAGGAAACTGAACATTAACAGGTAATTTGTTAAAAGAAAAACAATCCCAACTTTAAGAACAGTAAATTAAAATTTTCAGTTTATATAAATAAACAAAATTTCAAATCTTTTATGTTGGTCACAACTCTTCTGACAACTCGTGTACTGTCTTGAATTATTACAATTTTTTATTATAAAATTTTCAAAATGAATAGAGAATAATATTTTTTTTAAAAAAAAAATGTCTTTTTTAATAATAATAATTTGAAAATTCTCTCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCATCACGCCGATCCTCCAAGTGTCACCCTTAGGTATTTTCTCCTTTTCCATTTTTATTCTCAAGCATATGTATTCCTCTTCCCCTCTAAGGTCTAAAGTATTTTAATTTGGTTATATGAGAAATTAAATTGAACTCAAAGTGCGTACTGGGATGGATGATGGAAATGGGGAAATATGTAAAAGCAGAAGCCAGACATGCTTTACAGCCAATTCATCGGCTCTCGTGGCCATTTTTTCGAACTTCGAGAATTAAGAATTCAAAATTAATATTGAATTAAGAAATGGGGTATATCAGAATTCAAATATATTTGGTTGACAGGGATGGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGACGGCAGAGCCGGCATCGTCACCCGATGACGACAGCGCGTCCGTCTCCGCCTGCTCCACCACCGCTGACCGTGGTGCCTCCTGCTGTAAATCAGTCGCTCTTACTGTAAGTTCCTTTTAATTTTTGAAAATTATTTAGTAAGAACTTTTTTTGAAATATGAACTCAATTATGATAGAAGAGAGTAAAAGTGGAAAGGGTTTTATAATTTTCCTAAAGTATTGAAATGAGTAGGGGTTGTATTGGTGGTGGTGCTAAGCCCATTATATGAACAAAGTATCAAAGTCTCAAAGTCTCATTGCTACATTATCATAAAAATAAGTTTTGAAAAAGAAAAGAACTTAAGTGGGTGTAACTTATCACTACATAATTGGAAATCATTATGAGAAACACTAATTCCACCCACTACCATATGTTAAATTTGTTTATTTAGTAATTTTAACTCAAACTGTTATCATTTTTATTTAATAAAAATGTTCTAAAAGGTAAAATTTCTTGGTGGGGTTGGCCTTCATTGAAACTTTACTCAATAATTTAAAACTATATTGTAAAAAAAAAAAAAATGTGACAATAATATATAATGTAGCTCACCAACCCAACAATTAACGGTTAGCCCCTAGCAGCCTACCATCACTTTCCTTAGCTACTATTTCTTTTCTCTTTTCTTCCCTTGAAAATTTCAAAAAATGAAAAAAATCATTCCTTTTGATACTAAGATTATTCTCTTATGACTTTATATAGTTCACATTTTTATTTTAACTTTGTTTATGCAGTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGATGTGGTTGCTGTTGGCACTGCTGATTATCCATTTACACTTGCCACTGTGAGTACTCAACTTGACTCTATTCTGTTTCGTCTGTGGTTCGTGAGTAGTATTCTGTGAAAAATTGTAAAAATTATCATTGAAATATAGTGGTAGTATACGAAAGTTTAAGGATATAATTGCTACTAAGTATTCTGTTGTGTATATTTGTTTTAGGTGCTTATTTTAAGAGCCAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAACGGTTACTGCTATTCAAAACAGTGTTCGTCGAAATCGGTATCAGTATCGATATCGGAATCACGAGGTGAGTTTTAATTTATTGTTTGAAAGCCAAGAGAAGGGGAAAAGTTGAGGTGTTACTTCCCATGATTGACTGAATTTCTTTTGAATGTGTTTGGAATAGGATTCTGATGATGATGATGATGATATTTCCAGCTTTGAAGATGATGATAGAAGACTGCATCATATTGTCTAAGCTTTATACAGACACTCATTATTTGTTACATTTTTTTAAAAAAGGAAAATTATTTGAACTAACTCAACACATCATAGATTCTTCACTTTGTCAATATTTTCCCCCTAATTCAATGTAATTTTATCTCAATAATGGAAGGAAAAAAAATAGAAATCTTTTCTTTTTTTCAATCTGTGCAAACACTTTCAGATTGTAATATTCAATGGTAAAATTTCAATTTTTTTGTTAATATTGTACTTAAAATGAGTGTTGTAAGTATAACTCAGAGTACATATATTTTCCTTAATAATTTAGATTAATTTAATTAGTAATTAAT

mRNA sequence

ATGGAGGAAGTATTTGTATATGTGGAGGAGTTTCCATTTCAAACGTCCTACGACGTTTCGCGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCTCTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATTAAGTTTGCTCATAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACGGTTTGTGAAATTTGTCTCCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCATCACGCCGATCCTCCAAGTGTCACCCTTAGGGATGGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGACGGCAGAGCCGGCATCGTCACCCGATGACGACAGCGCGTCCGTCTCCGCCTGCTCCACCACCGCTGACCGTGGTGCCTCCTGCTGTAAATCAGTCGCTCTTACTTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGATGTGGTTGCTGTTGGCACTGCTGATTATCCATTTACACTTGCCACTGTGCTTATTTTAAGAGCCAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAACGGTTACTGCTATTCAAAACAGTGTTCGTCGAAATCGGTATCAGTATCGATATCGGAATCACGAGGATTCTGATGATGATGATGATGATATTTCCAGCTTTGAAGATGATGATAGAAGACTGCATCATATTGTCTAA

Coding sequence (CDS)

ATGGAGGAAGTATTTGTATATGTGGAGGAGTTTCCATTTCAAACGTCCTACGACGTTTCGCGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCTCTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATTAAGTTTGCTCATAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACGGTTTGTGAAATTTGTCTCCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCATCACGCCGATCCTCCAAGTGTCACCCTTAGGGATGGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGACGGCAGAGCCGGCATCGTCACCCGATGACGACAGCGCGTCCGTCTCCGCCTGCTCCACCACCGCTGACCGTGGTGCCTCCTGCTGTAAATCAGTCGCTCTTACTTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGATGTGGTTGCTGTTGGCACTGCTGATTATCCATTTACACTTGCCACTGTGCTTATTTTAAGAGCCAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAACGGTTACTGCTATTCAAAACAGTGTTCGTCGAAATCGGTATCAGTATCGATATCGGAATCACGAGGATTCTGATGATGATGATGATGATATTTCCAGCTTTGAAGATGATGATAGAAGACTGCATCATATTGTCTAA

Protein sequence

MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV*

Homology

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BLAST of CsaV3_4G001190 vs. NCBI nr
Match: XP_011652953.1 (uncharacterized protein LOC101220948 isoform X1 [Cucumis sativus] >KGN52850.1 hypothetical protein Csa_015207 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE
Sbjct: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF
Sbjct: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 233
           PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV
Sbjct: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 232

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BLAST of CsaV3_4G001190 vs. NCBI nr
Match: XP_016901466.1 (PREDICTED: uncharacterized protein LOC103494737 [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 9.6e-113
Identity = 214/235 (91.06%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           MEEVFVYVEEF FQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE
Sbjct: 1   MEEVFVYVEEFRFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKPHH D   VT+RDGVEIPRSEDEE AEPAS  D D A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHTD-QGVTIRDGVEIPRSEDEEAAEPASPRDGDGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           S+SACSTTA+RGASCCKSVALTFTLVLLVRHFYDVVAVGT +YPFTLATVLILRASGIIF
Sbjct: 121 SLSACSTTANRGASCCKSVALTFTLVLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDD---DDISSFEDDDRRLHHIV 233
           PMYVIIRT+TAIQNSVRRNRYQY+YRNHED DDDD   DDISSFEDDDRRLHHIV
Sbjct: 181 PMYVIIRTITAIQNSVRRNRYQYQYRNHEDFDDDDDEEDDISSFEDDDRRLHHIV 234

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BLAST of CsaV3_4G001190 vs. NCBI nr
Match: XP_038903312.1 (uncharacterized protein LOC120089938 isoform X1 [Benincasa hispida])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 201/232 (86.64%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M EVFVYV++F FQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE
Sbjct: 1   MGEVFVYVDDFQFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKP HAD P VT+R+ VEIPRSEDEETAEP   PDD  A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQHAD-PGVTIRNSVEIPRSEDEETAEP---PDDGGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
             +ACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTA+YPFT+ATVL LRASGIIF
Sbjct: 121 LDTACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTAEYPFTVATVLFLRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 233
           PMYVIIR +T IQNSV RNRYQ  Y+NHEDS DD +DISSFEDDDRRLHHIV
Sbjct: 181 PMYVIIRMITTIQNSVYRNRYQ--YQNHEDS-DDGEDISSFEDDDRRLHHIV 225

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BLAST of CsaV3_4G001190 vs. NCBI nr
Match: XP_022998108.1 (uncharacterized protein LOC111492856 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 3.0e-98
Identity = 186/232 (80.17%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M E  +YV++F F+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKP   D P V++ DGV+IPRSE EE AEPAS P DD A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGD-PGVSISDGVQIPRSEQEEAAEPASPPADDGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           S SACSTT DRGAS CKSVALTFTLVLLVRHFYDV+AVG  DYPFTLATVL+LRASGIIF
Sbjct: 121 SDSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 233
           PMYVIIR +T +Q ++RR+RY+YRYR+ +DSDD+DDDISSFEDD+RRLHHIV
Sbjct: 181 PMYVIIRAITTVQYNIRRSRYRYRYRD-QDSDDEDDDISSFEDDERRLHHIV 230

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BLAST of CsaV3_4G001190 vs. NCBI nr
Match: XP_031739593.1 (uncharacterized protein LOC101220948 isoform X2 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 46  IKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSED 105
           ++FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSED
Sbjct: 36  VQFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSED 95

Query: 106 EETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPF 165
           EETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPF
Sbjct: 96  EETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPF 155

Query: 166 TLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDD 225
           TLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDD
Sbjct: 156 TLATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDD 215

Query: 226 RRLHHIV 233
           RRLHHIV
Sbjct: 216 RRLHHIV 222

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BLAST of CsaV3_4G001190 vs. ExPASy Swiss-Prot
Match: Q0P496 (E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 30/81 (37.04%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 22  CRICHEEEFESPLQ--LEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTA 81
           CRIC    F+ P Q  L +PC CSG+++  H  C+ +W SE+GS  CE+C   Y+     
Sbjct: 143 CRIC----FQGPEQGELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQV-IAI 202

Query: 82  PSKKPHHADPPSVTLRDGVEI 101
            +K P      S+T+ + V+I
Sbjct: 203 STKNPLQWQAISLTVIEKVQI 218

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BLAST of CsaV3_4G001190 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 22  CRICHEE-EFESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQ--NYEPGY- 81
           CRIC    + ++PL+   PC+CSG+IKF H+DC+ +W +   +  CE+C    ++ P Y 
Sbjct: 68  CRICRNPGDADNPLRY--PCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYA 127

Query: 82  -TAPSKKP 85
             APS+ P
Sbjct: 128 DNAPSRLP 133

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BLAST of CsaV3_4G001190 vs. ExPASy Swiss-Prot
Match: Q86YJ5 (E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-07
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 21  RCRICHEEEFESPLQ--LEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYT 80
           +CRIC    F+ P Q  L +PC C G+++  H+ C+ RW SE+GS  CE+C   Y+    
Sbjct: 109 QCRIC----FQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQV-LA 168

Query: 81  APSKKPHHADPPSVTLRDGVEI 101
             +K P      S+T+ + V+I
Sbjct: 169 ISTKNPLQWQAISLTVIEKVQI 185

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BLAST of CsaV3_4G001190 vs. ExPASy Swiss-Prot
Match: Q3TZ87 (E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-07
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 21  RCRICHEEEFESPLQ--LEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYT 80
           +CRIC    F+ P Q  L +PC C G+++  H+ C+ RW SE+GS  CE+C   Y+    
Sbjct: 109 QCRIC----FQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQV-LA 168

Query: 81  APSKKPHHADPPSVTLRDGVEI 101
             +K P      S+T+ + V+I
Sbjct: 169 ISTKNPLQWQAISLTVIEKVQI 185

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BLAST of CsaV3_4G001190 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.6e-07
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 14  QTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEIC 70
           +T  D   CRICHE    +   L +PC CSGT+   H+ C++RW S   ++ CE+C
Sbjct: 56  ETPSDGPFCRICHEG--ANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELC 109

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BLAST of CsaV3_4G001190 vs. ExPASy TrEMBL
Match: A0A0A0KT99 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003640 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.6e-127
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE
Sbjct: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF
Sbjct: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 233
           PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV
Sbjct: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 232

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BLAST of CsaV3_4G001190 vs. ExPASy TrEMBL
Match: A0A1S4DZR9 (uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.6e-113
Identity = 214/235 (91.06%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           MEEVFVYVEEF FQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE
Sbjct: 1   MEEVFVYVEEFRFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKPHH D   VT+RDGVEIPRSEDEE AEPAS  D D A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHTD-QGVTIRDGVEIPRSEDEEAAEPASPRDGDGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           S+SACSTTA+RGASCCKSVALTFTLVLLVRHFYDVVAVGT +YPFTLATVLILRASGIIF
Sbjct: 121 SLSACSTTANRGASCCKSVALTFTLVLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDD---DDISSFEDDDRRLHHIV 233
           PMYVIIRT+TAIQNSVRRNRYQY+YRNHED DDDD   DDISSFEDDDRRLHHIV
Sbjct: 181 PMYVIIRTITAIQNSVRRNRYQYQYRNHEDFDDDDDEEDDISSFEDDDRRLHHIV 234

[Close]

BLAST of CsaV3_4G001190 vs. ExPASy TrEMBL
Match: A0A6J1KFW1 (uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 186/232 (80.17%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M E  +YV++F F+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYTAPSKKP   D P V++ DGV+IPRSE EE AEPAS P DD A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGD-PGVSISDGVQIPRSEQEEAAEPASPPADDGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           S SACSTT DRGAS CKSVALTFTLVLLVRHFYDV+AVG  DYPFTLATVL+LRASGIIF
Sbjct: 121 SDSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 233
           PMYVIIR +T +Q ++RR+RY+YRYR+ +DSDD+DDDISSFEDD+RRLHHIV
Sbjct: 181 PMYVIIRAITTVQYNIRRSRYRYRYRD-QDSDDEDDDISSFEDDERRLHHIV 230

[Close]

BLAST of CsaV3_4G001190 vs. ExPASy TrEMBL
Match: A0A6J1J7P0 (uncharacterized protein LOC111482490 OS=Cucurbita maxima OX=3661 GN=LOC111482490 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.1e-97
Identity = 185/233 (79.40%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M EV +YVEEF  QTSY VSRCRICHE+EFE+ LQLEAPCSCSGTIKFAHRDCIQRWC+E
Sbjct: 1   MGEVSLYVEEFQLQTSYQVSRCRICHEDEFETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KGSTVCEICLQNYEPGYT+PSKKP   D P VT+RD ++IPRSE+EE AEP S P D  A
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGD-PGVTIRDSLQIPRSEEEEAAEPTSPPADGGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           S S CSTTADRGASCCKSVALTFTL+LLVRHFY+V+ + TA YPFTLATVLILRASGIIF
Sbjct: 121 SDSTCSTTADRGASCCKSVALTFTLMLLVRHFYEVITIDTAQYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSD-DDDDDISSFEDDDRRLHHIV 233
           PMYVIIRT+TAIQNS RRNRYQY   + E+SD D DDDISSFE+DDRR HHIV
Sbjct: 181 PMYVIIRTITAIQNSARRNRYQYEDEDEEESDGDSDDDISSFEEDDRRAHHIV 232

[Close]

BLAST of CsaV3_4G001190 vs. ExPASy TrEMBL
Match: A0A6J1GB95 (uncharacterized protein LOC111452590 OS=Cucurbita moschata OX=3662 GN=LOC111452590 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94
Identity = 176/232 (75.86%), Postives = 198/232 (85.34%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M E  +YV++F F+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           K S VCEICLQNYEPGYTAPSKKP   D P V++ DG +IPRSE E  AEPAS P DD A
Sbjct: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGD-PGVSISDGAQIPRSEQEVAAEPASPPADDGA 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
           S S CSTT DRGAS CKSVALTFTLVLL+RHFYDV+AVG  DYPFTLATVL+LR SGIIF
Sbjct: 121 SDSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIF 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 233
           PMYVIIR +T +QNS+ R+RY+YRYR+ +  D++DDDIS FEDD+RRLHHIV
Sbjct: 181 PMYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of CsaV3_4G001190 vs. TAIR 10
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 109/229 (47.60%), Postives = 155/229 (67.69%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M +V ++++E   ++S+  +RCRICHEEE ES    EAPCSCSGTIKFAHRDCIQRWC E
Sbjct: 1   MGDVVLFIDETYLKSSF--NRCRICHEEEAES--YFEAPCSCSGTIKFAHRDCIQRWCDE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KG+T+CEICLQ Y+PGYT  S KP      +VT+RD + I R E+          + + +
Sbjct: 61  KGNTICEICLQEYKPGYTTTS-KPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREES 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
               C++  DRGASCC+ +AL F+++LL++H +D V  GT +YP+T+ TVL L+A GI+ 
Sbjct: 121 DFQECNSGVDRGASCCRYLALIFSVILLIKHAFDAV-YGTEEYPYTIFTVLTLKAIGILL 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLH 230
           PM VIIRT+TAIQ S+   RYQ    + ED+   +++    E+++++ H
Sbjct: 181 PMLVIIRTITAIQRSL---RYQI-LESEEDTLSSEEEDHGLEEEEQQQH 219

[Close]

BLAST of CsaV3_4G001190 vs. TAIR 10
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 4.5e-44
Identity = 104/231 (45.02%), Postives = 154/231 (66.67%), Query Frame = 0


Query: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60
           M +V +++++   ++   ++RCRICHEEE ES    E PC+CSGT+KFAHR+CIQRWC+E
Sbjct: 1   MGDVILFIDD--TKSKVRITRCRICHEEEEES--FFEVPCACSGTVKFAHRNCIQRWCNE 60

Query: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120
           KG+T CEICLQ Y+ GYTA  K+    +   VT+R    +       +    S  + D  
Sbjct: 61  KGNTTCEICLQVYKDGYTAVLKQSKLIE-QEVTIR----VNGRRRRRSRRLVSIAESD-- 120

Query: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180
            +S C++ ADRGAS C+S+  T ++ LL++H +DV+  GT +YPF++ TVL L+A GI+ 
Sbjct: 121 -ISQCNSVADRGASFCRSLTFTLSVFLLMKHTFDVI-YGTEEYPFSVFTVLTLKAIGILL 180

Query: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHED--SDDDDDDISSFEDDDRRLH 230
           PM++IIRT++ IQ ++RR R+QY     ED  S DDDDD+   ED++++ H
Sbjct: 181 PMFIIIRTISTIQKTLRR-RHQYPESEEEDRLSSDDDDDLEE-EDEEQQQH 216

[Close]

BLAST of CsaV3_4G001190 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-27
Identity = 70/177 (39.55%), Postives = 102/177 (57.63%), Query Frame = 0


Query: 21  RCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAP 80
           +CRICH+E+ ++   ++ PCSCSGT+KFAH +C+QRWC+EKG TVCEIC Q Y+PGYTAP
Sbjct: 53  QCRICHDEDEDT--NMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAP 112

Query: 81  SKKPHHADPPSVTLRDGVEIPRSEDEETAEPA----SSPDDDSASVSACSTTADRGASCC 140
            +  H+     +++  G +    E  +   P        DDD    S  S T+     CC
Sbjct: 113 RQLFHYT---GISMNFGSDW-GIEGLDLRNPYFLTWGDADDDHDLYSFHSPTS---LICC 172

Query: 141 KSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQ 194
           + +AL F L+L +RH   V+  G  D+  TL  + ++R  GI+   YV  ++   IQ
Sbjct: 173 RLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQ 220

[Close]

BLAST of CsaV3_4G001190 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-26
Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 0


Query: 19  VSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYT 78
           ++ CRICH+E+ +S   +E PCSCSG++K+AHR C+QRWC+EKG T CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  APSKKPHHADPPSVTLRDGVEIPRSEDE-ETAEPASSPDDDSASVSACSTTADRGASCCK 138
           AP         P +  R    I + E    T  PA S   D     + +T+      CC+
Sbjct: 116 APPPLLELGHVP-LHFRGNWGISQREHRFITVVPADSTFIDQPYPLSSTTS----FICCR 175

Query: 139 SVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQNSVR 198
           S+ L F  +L++RH   +V  G+  + F L T+L LR  GI+ P+YV+ + V     + R
Sbjct: 176 SLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA----TCR 235

Query: 199 RNRYQYRYRNHEDSDDDDDD 218
           R+         +DS D++ D
Sbjct: 236 RHSRTLDTSPSDDSSDEETD 244

[Close]

BLAST of CsaV3_4G001190 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-26
Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 0


Query: 19  VSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSEKGSTVCEICLQNYEPGYT 78
           ++ CRICH+E+ +S   +E PCSCSG++K+AHR C+QRWC+EKG T CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  APSKKPHHADPPSVTLRDGVEIPRSEDE-ETAEPASSPDDDSASVSACSTTADRGASCCK 138
           AP         P +  R    I + E    T  PA S   D     + +T+      CC+
Sbjct: 116 APPPLLELGHVP-LHFRGNWGISQREHRFITVVPADSTFIDQPYPLSSTTS----FICCR 175

Query: 139 SVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIFPMYVIIRTVTAIQNSVR 198
           S+ L F  +L++RH   +V  G+  + F L T+L LR  GI+ P+YV+ + V     + R
Sbjct: 176 SLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVA----TCR 235

Query: 199 RNRYQYRYRNHEDSDDDDDD 218
           R+         +DS D++ D
Sbjct: 236 RHSRTLDTSPSDDSSDEETD 244

The following BLAST results are available for this feature:

BLAST of CsaV3_4G001190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652953.1	2.0e-126	100.00	uncharacterized protein LOC101220948 isoform X1 [Cucumis sativus] >KGN52850.1 hy...	[more]
XP_016901466.1	9.6e-113	91.06	PREDICTED: uncharacterized protein LOC103494737 [Cucumis melo]	[more]
XP_038903312.1	3.1e-103	86.64	uncharacterized protein LOC120089938 isoform X1 [Benincasa hispida]	[more]
XP_022998108.1	3.0e-98	80.17	uncharacterized protein LOC111492856 [Cucurbita maxima]	[more]
XP_031739593.1	1.5e-97	98.93	uncharacterized protein LOC101220948 isoform X2 [Cucumis sativus]	[more]

BLAST of CsaV3_4G001190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0P496	1.9e-07	37.04	E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1	[more]
F4JKK0	1.9e-07	39.71	Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S...	[more]
Q86YJ5	2.5e-07	36.59	E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2	[more]
Q3TZ87	2.5e-07	36.59	E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=...	[more]
Q32L65	5.6e-07	41.07	E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1	[more]

BLAST of CsaV3_4G001190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT99	9.6e-127	100.00	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G00364...	[more]
A0A1S4DZR9	4.6e-113	91.06	uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=...	[more]
A0A6J1KFW1	1.5e-98	80.17	uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856...	[more]
A0A6J1J7P0	6.1e-97	79.40	uncharacterized protein LOC111482490 OS=Cucurbita maxima OX=3661 GN=LOC111482490...	[more]
A0A6J1GB95	1.3e-94	75.86	uncharacterized protein LOC111452590 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]

BLAST of CsaV3_4G001190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02610.1	1.2e-49	47.60	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT4G02075.1	4.5e-44	45.02	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	3.9e-27	39.55	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	7.3e-26	37.50	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	7.3e-26	37.50	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 21..70 e-value: 1.5E-18 score: 77.6
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 22..69 e-value: 7.9E-14 score: 51.5
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 14..76 score: 21.935171
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 75..189 e-value: 8.1E-29 score: 100.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 12..80 e-value: 3.8E-19 score: 70.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..123
None	No IPR available	PANTHER	PTHR23012:SF180	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..202
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 22..69 e-value: 2.05823E-18 score: 73.9008
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 17..74
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G001190.1	CsaV3_4G001190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding