CsaV3_4G000780 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G000780
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	LYR motif protein
Location	chr4: 446410 .. 448914 (+)
RNA-Seq Expression	CsaV3_4G000780
Synteny	CsaV3_4G000780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGCAGACCCCTAGATTCCCGCCATTCAATTGACTCCTGTACTCTCAAATTCCATGGTTGGACCCCTTTCCATCTCCCCAAAACCCTAGATTCCGACCCCCATAATACCTCTGCTCCCACTAACTCTAAACCCTACTACTCTTCTACTCCCCTCCATACCAAACGCCCTTGTCTCTCCGATCGCACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTCCTCCTGCCCGTAGCTTCCGATTGATTGCTAGGAAGCGACGTCGGCGTGGTTCTAGGTCTGTTTCTGGCCGGAGTAGTGATCGAAGTGGGACTAGACGGTGTTGCTCCGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCGGATTTTCCTATTGCGGTTGGGACTGATTCGAGTGGAGAGTTGTTTGTTAATGGGGATGCCAATTGGTCTTCGGATGTGAGTGAAGCTAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGTTTCGTCTAATGGTGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGATGCTAGATTGCTGTTGTGGGGTGAACGACTTGGAGGTTCGTTTTCTTTCTCATTTTCTTCTCATCTTAAGAGATTACAATGGTTAATCACATTGATGGCTTGGACTAGACTACAATTTTAGTTTTAAATGTTGATGTTGGCTGTTATGGCACTTGTTGGATACCTCGTTTGTACAACAATTCTTGGGGACAAAGATTTTGACGTTCAATGTTAAGCCTAATAAATGGACGTATGAGTTTCTAAAGCATATATTTACGGTTAAATTATACCAAGACCATAAACCTCAGGCTTCGTTTCTGCATGTCTATTCATTTATTGAAAATTTTAAAAAATATATTTTTTCCCTAAAATAGACCATGGAACTAATTTACTTGAATGCAAATGATGTCACGTATGTTATTTGTGTTTGAAAAAAATATATATATATATATGTTTCTTATTGAATTTTCATAGATGTGTAAAAAAGTTGATTTTTTTAAAATCTCTTATATCTGACATCTTGTGTCCCAGATTTTTAAAGGTGTTGTCTCGACAATGCATCCGTGTCTATCTGGCTTTTTAGATTTTGAGATACATTTAGCTAATCCTTAAAAATTGAAATGTTCTCTTTGAAATTGAATTCCACTGTTCCTATCATCACATTAACTAAAAGATGGGTTCTTTTATCGGTTTGTTTTGAAATGATAAACATAATAGAGTGAAGAAGTGTACTAGGAGTTTGATTCACAAGTAAACGAGGAGTATTGGACAATCATTTTATTGTCCGAATGTAGCCGATGTTTGTCTGACATGTCATTTCAACGGTTCTATCTTTAGCTAAGGATGTTTACGATAACAGCTATTCAAACATAGGGGAGGCAATTGAAAATTTTGAACTCTAGAAACTAATGTTGTAATTTAACGGAGCAGACTTTTGAGGGTTTATTTTAATAATTTATTTTGTGAAGCATGATCTACATCTGAATTTAGTAGCTTTATGAACCTTTGATCTCATATTTAGCATTGTCTGGGAACTATATTCCTCTTAGAACATGGTTTCACATTGACTTGAAAAGAGTTAATTTTCTTACTCCACAACATGCGACTCTGTTTCACCTTCGGATGTCAACGAAAGCTTTATCTCTAATGACATTAAACTGGCTTGTTGTCTTATTCTAGTTCTGTTGGTGGATTTGTTTAAAAAGATGGCACGATATGGTAAAAAATCGTGCCGTGCCTTTCTACTTAAGATTGAATAAACTTGAGAACAACTATTTTGGGACTGGCTCCCGGTAGAGTTAAGGTGTTTAAAGATGGACAATTGTGGATGTAGTATTTGTGCTACATTTCGTTTCGAGTATGAATTTTATTTTATCTAGAAATTTATATCATTGTTAACTTTTCATCTATGCTTTTAGTTATGGCAATTTTAGGCAATTTGTGTCCTAGAGTTGATTTCGTTGAAAGATGAGAATATAACTTATCCTAGAAAATAGGGTAGTCCTCTCAATAAATGTCTTTTGCTCTTGGTAGAACGTAACAAGTTCATTTATCTTTCTTCTACCTTAAATGACTGCCTCCTGGTTAATATGTATGTCCTGCCTTCCGTTTGCCCAAAGACATCGATTGGCACAGCAATGACCAATGGGAAGATTGAATGCTTGATTTCAAATTTCTGATATGCACATACAGTCCGTCACCTTTTTCTGTTTCAAAATCCAAGTTAAAGAGATAGATTGATATGTTCACATTCTATGCAGATTCCAGAATGGAAATCGTAGGAGAGAACACATTTGCAGATCAGAAATCGCACCATAGATGTCGCCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

mRNA sequence

ATGTCTCGCAGACCCCTAGATTCCCGCCATTCAATTGACTCCTGTACTCTCAAATTCCATGGTTGGACCCCTTTCCATCTCCCCAAAACCCTAGATTCCGACCCCCATAATACCTCTGCTCCCACTAACTCTAAACCCTACTACTCTTCTACTCCCCTCCATACCAAACGCCCTTGTCTCTCCGATCGCACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTCCTCCTGCCCGTAGCTTCCGATTGATTGCTAGGAAGCGACGTCGGCGTGGTTCTAGGTCTGTTTCTGGCCGGAGTAGTGATCGAAGTGGGACTAGACGGTGTTGCTCCGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCGGATTTTCCTATTGCGGTTGGGACTGATTCGAGTGGAGAGTTGTTTGTTAATGGGGATGCCAATTGGTCTTCGGATGTGAGTGAAGCTAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGTTTCGTCTAATGGTGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGATGCTAGATTGCTGTTGTGGGGTGAACGACTTGGAGATTCCAGAATGGAAATCGTAGGAGAGAACACATTTGCAGATCAGAAATCGCACCATAGATGTCGCCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

Coding sequence (CDS)

ATGTCTCGCAGACCCCTAGATTCCCGCCATTCAATTGACTCCTGTACTCTCAAATTCCATGGTTGGACCCCTTTCCATCTCCCCAAAACCCTAGATTCCGACCCCCATAATACCTCTGCTCCCACTAACTCTAAACCCTACTACTCTTCTACTCCCCTCCATACCAAACGCCCTTGTCTCTCCGATCGCACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAGCCTTCTATTCCTCCTGCCCGTAGCTTCCGATTGATTGCTAGGAAGCGACGTCGGCGTGGTTCTAGGTCTGTTTCTGGCCGGAGTAGTGATCGAAGTGGGACTAGACGGTGTTGCTCCGTTGGGGCTTCCGCGGCTCATGGGACTTGCTCGGATTTTCCTATTGCGGTTGGGACTGATTCGAGTGGAGAGTTGTTTGTTAATGGGGATGCCAATTGGTCTTCGGATGTGAGTGAAGCTAAGAATTCGAGGAGGGAGAGAGAGGAGAAGGATCATTTGGGTTCTGGGTTTGTTTCGTCTAATGGTGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGGTGAATTTGGATATGGTGATGAGATCGATGAGGAGGATGAGGATGCTAGATTGCTGTTGTGGGGTGAACGACTTGGAGATTCCAGAATGGAAATCGTAGGAGAGAACACATTTGCAGATCAGAAATCGCACCATAGATGTCGCCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

Protein sequence

MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR*

Homology

[Close]

BLAST of CsaV3_4G000780 vs. NCBI nr
Match: XP_004152251.1 (uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical protein Csa_015327 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 3.1e-147
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240

Query: 241 NTFADQKSHHRCRRKKHECRMVDALR 267
           NTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 NTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of CsaV3_4G000780 vs. NCBI nr
Match: XP_008454343.1 (PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo])

HSP 1 Score: 530.4 bits (1365), Expect = 8.9e-147
Identity = 264/266 (99.25%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240

Query: 241 NTFADQKSHHRCRRKKHECRMVDALR 267
           NTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 NTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of CsaV3_4G000780 vs. NCBI nr
Match: XP_038906083.1 (uncharacterized protein LOC120091971 [Benincasa hispida])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 252/270 (93.33%), Postives = 256/270 (94.81%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK HGW+PFHLPKTLDSD H +SAPTNSKPYYSSTPLHTKRPCL
Sbjct: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTH-SSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RS RLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSLRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240
           GSGF SSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDS+ME
Sbjct: 181 GSGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSKME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 267
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 269

[Close]

BLAST of CsaV3_4G000780 vs. NCBI nr
Match: TYK29505.1 (uncharacterized protein E5676_scaffold655G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 459.1 bits (1180), Expect = 2.5e-125
Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIV 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +V
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGGHNAVMALV 240

[Close]

BLAST of CsaV3_4G000780 vs. NCBI nr
Match: KAA0044378.1 (uncharacterized protein E6C27_scaffold46G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 457.2 bits (1175), Expect = 9.6e-125
Identity = 231/241 (95.85%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKP+YSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPHYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIV 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +V
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGGHNAVMALV 240

[Close]

BLAST of CsaV3_4G000780 vs. ExPASy TrEMBL
Match: A0A0A0KT54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240

Query: 241 NTFADQKSHHRCRRKKHECRMVDALR 267
           NTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 NTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of CsaV3_4G000780 vs. ExPASy TrEMBL
Match: A0A1S3BYD4 (uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.3e-147
Identity = 264/266 (99.25%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRMEIVGE 240

Query: 241 NTFADQKSHHRCRRKKHECRMVDALR 267
           NTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 NTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of CsaV3_4G000780 vs. ExPASy TrEMBL
Match: A0A5D3E2G5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001060 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIV 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +V
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGGHNAVMALV 240

[Close]

BLAST of CsaV3_4G000780 vs. ExPASy TrEMBL
Match: A0A5A7TND4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001050 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.6e-125
Identity = 231/241 (95.85%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60
           MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKP+YSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPHYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120
           SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPARSFRLIARKRRRRGSRSVSGRSSDRSGTRR 120

Query: 121 CCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180
           CCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF
Sbjct: 121 CCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGF 180

Query: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG--DSRMEIV 240
           VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG  ++ M +V
Sbjct: 181 VSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGGHNAVMALV 240

[Close]

BLAST of CsaV3_4G000780 vs. ExPASy TrEMBL
Match: A0A6J1GCW8 (uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452804 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.0e-124
Identity = 242/275 (88.00%), Postives = 245/275 (89.09%), Query Frame = 0


Query: 1   MSRRPLDSRHSIDSCTLKFHGWTPFH----LPKTLDSDPHNTSAPTNSKPYYSSTPLHTK 60
           MSRRPLDSR SIDSCTLK H W PFH     PKTLDSD H  S PT SKPYYSST LHTK
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTH-ISPPTTSKPYYSSTALHTK 60

Query: 61  RPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRS 120
           RPCLSDRTTSFNVDAIDMS LSLIDDDKPSI       RSF LIARKRRRRGSRSVSGRS
Sbjct: 61  RPCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRS 120

Query: 121 SDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREE 180
           SDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRRER+E
Sbjct: 121 SDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDE 180

Query: 181 KD-HLGSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG 240
           KD HLG GF  SNGG DAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG
Sbjct: 181 KDHHLGGGF-GSNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLG 240

Query: 241 DSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR 267
           DSRMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 DSRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

[Close]

BLAST of CsaV3_4G000780 vs. TAIR 10
Match: AT4G02425.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 29 Blast hits to 28 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-67
Identity = 157/278 (56.47%), Postives = 188/278 (67.63%), Query Frame = 0


Query: 1   MSRRPLD-SRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPC 60
           MS + L+ SR SI+SCT +   W PFH  KTLDS    +  P  +  ++S TP   KRPC
Sbjct: 1   MSPKHLESSRSSIESCTSQLLSWRPFHRSKTLDS----SDQPPQTNGFHSFTP---KRPC 60

Query: 61  LSDRTTSFNVDAIDMSALSLIDDDK-------PSIPPARSFRLIARKRRRRGSRSVSGRS 120
            SDR+TSF ++A  MS LSL DDD         +     SFRL+ARKRRRR SRSVSGRS
Sbjct: 61  FSDRSTSFTIEA--MSRLSLADDDNGGKTLSASNYSNRGSFRLVARKRRRRNSRSVSGRS 120

Query: 121 SDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSE-AKNSRRERE 180
           SDRSGTRRCCS+G   AHGTCSD P AVGTDSSGELF  G+ANW+SDVSE A+NSRRER 
Sbjct: 121 SDRSGTRRCCSIG---AHGTCSDLPFAVGTDSSGELF--GEANWASDVSEAARNSRRERR 180

Query: 181 EK--DHLGSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGER 240
           +   +   SG      G D  GNESGYGSEPGYRGD EFGYGDE D+E+ED + L WG+ 
Sbjct: 181 DSGGEKEASGGFGFANGVDPMGNESGYGSEPGYRGDAEFGYGDEFDDEEEDVKPLFWGDT 240

Query: 241 LGDSRMEIVGENTFADQKSHHRCRRKK-HECRMVDALR 267
             DS M + GE  F+D K   RCRR++ H+ + VD++R
Sbjct: 241 --DSTMGMSGETKFSDSKPQFRCRRRRQHDYKTVDSMR 262

The following BLAST results are available for this feature:

BLAST of CsaV3_4G000780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152251.1	3.1e-147	100.00	uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical ...	[more]
XP_008454343.1	8.9e-147	99.25	PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo]	[more]
XP_038906083.1	1.3e-134	93.33	uncharacterized protein LOC120091971 [Benincasa hispida]	[more]
TYK29505.1	2.5e-125	96.27	uncharacterized protein E5676_scaffold655G001060 [Cucumis melo var. makuwa]	[more]
KAA0044378.1	9.6e-125	95.85	uncharacterized protein E6C27_scaffold46G001050 [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_4G000780 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G000780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT54	1.5e-147	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1	[more]
A0A1S3BYD4	4.3e-147	99.25	uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=...	[more]
A0A5D3E2G5	1.2e-125	96.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TND4	4.6e-125	95.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1GCW8	3.0e-124	88.00	uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_4G000780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02425.1	1.1e-67	56.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..177
None	No IPR available	PANTHER	PTHR36775	LYR MOTIF PROTEIN	coord: 1..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G000780.1	CsaV3_4G000780.1	mRNA