CsaV3_4G000670 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGAAAAACTGGACGATGAAGTTGAAATATTGAAGCAAGTATTTGGCGATTCTTCGGAAGACGAAGACTTCGTTGATGAAACTGTAACGAACGATTCATCATATGAACTGGGTCACATTCATAAATGGGAGCAGGTCAAGCAAATCAAAGGGTTGTGGCTCTGCAGATTCTTCCTCTCTCCCCAACAACAATCATCGCTTCTCTCCGCAATTCGAAACGGTTCATAATTTATTTTCTCAAGTTGTTCCTTCCCTATGTATAAACCCATATTCCTTCTGTTTTCGAATTTGATCCCTGAACTTAAGATTTCATTGAATAAAGTATGAACCATAGGTTCACCTTTTTAAAATTTCAGTATTTTTAGCTTACAATCTTTATGAGATTGATTGTAGGTAAATGCTTGAATGTATGGAAATGTTCATGAAACTGTTCCCATAAACTCATGCTAATCTTATACTGTTCTGTTTTCAGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGTACCTTCAGTTCTGATCTTGATTAGCTTACAAGGTGATCTAATATTAAACTTACTTTCACCCATCAGCTCAAGTTTTTAGGTCAGCCTGTGTTATCCGAGTAGATGATCTTGTGTTCAATGTTATTTCCTTTCCGATTAATATTAATTTTAACTTGGGGTTTTAATATATTCAAGTTCACTTTGTTTTTGGGTCAATTGGTGGTTTAAGAGCTATTTATTAGATCTATTGTTATGCCTAGATTTCAATTCTTGGCTGTCAGCAAGCAAGCACTGAGGATTTTGAATCCTGTATTGTTGTTGGATTTTGTTCTTGAAGTTTAGACTTGAATAATATTCCTAACTACCGTTACTTTTTCTCTTCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCAGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGATTGTGGATCGCTATAATGGAGATAAGATTGATTGTCCTCTTCCATCAGATATTTTGTGGAGAGAACCACTATTTGATCAAATGATAGCTAATGTGTATCAACCAGGTGAGGTGTGACGATGACTCTTTTCCATTCTGTTGTTTAGACATCTGTTTGAAATGAACATATAGGGCAATAAGTTTGCAGGCCCTAGGGGCTGTTTGGAAACAGTTATTTTGATGTAGAACTAGAAAACTTGTTTTTGAAGAGCATCTTTTGTTATAGTCGAATGCAGTTGAAGAGTCAGTTTGCAAAACAGTTGTAACCCTACAGCCATCAAGATTGTGATGTTTGGTCTGTCAAGATGAAGGGTGTACTTTAACAACAAATAGGTACAGTTTTTTTAGAGTTCAACAACATTTAGTGGGGCGGGGGCGGGAGGCTACAAACCTTTAACTGCCGCCTTAGTTGAGAGCATACGTCTTAATTGAGTGGATTTTCCTCAAATTGACACAAAAAAAAAAAAAAAATCCTTGTGGTATAGTATTTTAATGCACTCATGATTCATTTTACATCTATTCTATGACTTCTTATATCTGTTTATAATGTTTCGCTTGGATAGTTGGATTATTTGACAAGTTGTGCGCACTTCAAATGCCATCATGATTAGATAAGAACCCTTAATATTCTGCTAATCTGATAAAAATGATTTGTAAATAGCGTGTTTAAAGCTCTCATGGCCTTTTATTTATCTTCATCACTGCATTGCATTTCATCTGTTAGCTTTCCTCATTAGTAATTGATTCGCTGACATTGTTATAACTTCCCTCTTTTATTCTTTACAAGGGAATCTGTGCACATGTTGA ATGGGGGAAAAACTGGACGATGAAGTTGAAATATTGAAGCAAGTATTTGGCGATTCTTCGGAAGACGAAGACTTCGTTGATGAAACTGTAACGAACGATTCATCATATGAACTGGGTCACATTCATAAATGGGAGCAGGTCAAGCAAATCAAAGGGTTGTGGCTCTGCAGATTCTTCCTCTCTCCCCAACAACAATCATCGCTTCTCTCCGCAATTCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCAGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGATTGTGGATCGCTATAATGGAGATAAGATTGATTGTCCTCTTCCATCAGATATTTTGTGGAGAGAACCACTATTTGATCAAATGATAGCTAATGTGTATCAACCAGGGAATCTGTGCACATGTTGA ATGGGGGAAAAACTGGACGATGAAGTTGAAATATTGAAGCAAGTATTTGGCGATTCTTCGGAAGACGAAGACTTCGTTGATGAAACTGTAACGAACGATTCATCATATGAACTGGGTCACATTCATAAATGGGAGCAGGTCAAGCAAATCAAAGGGTTGTGGCTCTGCAGATTCTTCCTCTCTCCCCAACAACAATCATCGCTTCTCTCCGCAATTCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCAGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGATTGTGGATCGCTATAATGGAGATAAGATTGATTGTCCTCTTCCATCAGATATTTTGTGGAGAGAACCACTATTTGATCAAATGATAGCTAATGTGTATCAACCAGGGAATCTGTGCACATGTTGA MGEKLDDEVEILKQVFGDSSEDEDFVDETVTNDSSYELGHIHKWEQVKQIKGLWLCRFFLSPQQQSSLLSAIRNEGWFMEASQNQAMRFGNLPTWAVELSDSVYEAVLSSNHMTDTLIVDRYNGDKIDCPLPSDILWREPLFDQMIANVYQPGNLCTC* Homology
BLAST of CsaV3_4G000670 vs. NCBI nr
Match: KAE8649039.1 (hypothetical protein Csa_015051 [Cucumis sativus]) HSP 1 Score: 330.9 bits (847), Expect = 6.2e-87 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. NCBI nr
Match: XP_004152257.1 (uncharacterized protein LOC101207942 [Cucumis sativus]) HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. NCBI nr
Match: XP_008454361.1 (PREDICTED: uncharacterized protein LOC103494783 [Cucumis melo] >KAA0044368.1 alkylated DNA repair protein alkB-like protein 8 [Cucumis melo var. makuwa] >TYK29496.1 alkylated DNA repair protein alkB-like protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78 Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. NCBI nr
Match: XP_038905579.1 (uncharacterized protein LOC120091559 [Benincasa hispida]) HSP 1 Score: 291.2 bits (744), Expect = 5.4e-75 Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. NCBI nr
Match: XP_022998149.1 (uncharacterized protein LOC111492881 [Cucurbita maxima]) HSP 1 Score: 274.2 bits (700), Expect = 6.9e-70 Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. ExPASy TrEMBL
Match: A0A0A0KV56 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001660 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. ExPASy TrEMBL
Match: A0A5A7TNC5 (Alkylated DNA repair protein alkB-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00950 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 6.7e-79 Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. ExPASy TrEMBL
Match: A0A1S3BYI6 (uncharacterized protein LOC103494783 OS=Cucumis melo OX=3656 GN=LOC103494783 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 6.7e-79 Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. ExPASy TrEMBL
Match: A0A6J1KDK2 (uncharacterized protein LOC111492881 OS=Cucurbita maxima OX=3661 GN=LOC111492881 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70 Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. ExPASy TrEMBL
Match: A0A6J1GAA7 (uncharacterized protein LOC111452220 OS=Cucurbita moschata OX=3662 GN=LOC111452220 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70 Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of CsaV3_4G000670 vs. TAIR 10
Match: AT4G02485.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33 Identity = 75/150 (50.00%), Postives = 95/150 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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