CsaV3_3G049950 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G049950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	low-temperature-induced 65 kDa protein
Location	chr3: 40746023 .. 40751387 (+)
RNA-Seq Expression	CsaV3_3G049950
Synteny	CsaV3_3G049950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAATGTTTATATTTCATTAGATTAATAAAGAAAATTATATACAAATTAAAAAGATTTAGCATTGGTAGGTCATGTGGAGGGAAAAGAAGAACTACAAGAAGGGGACCAGGAGCATCATGAGAAGAAGTCAGTGTTGAAGAAAGTGAAGGCGAAAGCTAAGAAGATTAAAGACACTATTACGAAGCACGGCCATGGCCATGATCATCATGACGAAGAAGACGTCAGTGATGACGAGGAGGATGAAGTTGTAGAAGATCCTGAAATCCAGGGTGCACCATGTATATAACATCTTCCTTTTCTTTCATAATTATAAATTGATGTAGGTGTTGTCAATTTGAAGAAGAGAATGTTAACTAAAGTACATTTTGACAGTATATGAAGGTGCTGCAATGAGGAGTGCCGTGGCTGGGAAAGGGCAGCATCAAGATGTCGGAATTGGAACTGGAACGACGAGAATGATGCACAATGAGCCGCCTCCAGCTCGAAGGGAAATCACAAGTCGTCCCTCTGCTGTTGACACTGGTTTTACTTCCATCCATAATACCACAGCAAATTATAAAGTAGACGACTCCAATGTTGCCCCGAACACCACCATGTCTCTATCTCCATGGAAATTGGAGGATGATCCTCACGCGCCTAAGGACCCTCATGCTCCTCATATCTCCGAGGTCAAAGTTCACGATCCCTCTAACAGAGGTAATTAGATCCATACGTAAGACTTTTTTCATCATCATATTTTATTTTAGAGCTCAATTCGAGGCTCATGGTACGTGTGTTATTTTGTTTAGAGCTTTGAATCTCATTCCATGATATCCAACTTTCTCGCTTTTTATTTGGGTACACATTTTATTATGCTTATCAAAATAAGCTGGCTTGCAAATTTTGTCCTATTTTTAGTTTCCACTGAACTTACTTCTAGTGAGTCCTTTACGTCTTCAAAGCCCACTACAGAGTAAAGAGTCAACCAATCGAAGTTAGTAAAAAAACTAATCTAAAACTCATGACTATAAGGTGATCTTTTGTTTTCGTTTTTTGGGTTTTTTTTTTTTTATCTCATGAACATGTCTGCAACGTACAGGGAGCGAAGAGGCAGCAGGGAGATCTCAAGTCTTCGATTCATTTGCAAGAATGAAAGTTGACGACAAAGAACCGAACCGCACCGGTTCACCACGTGGATTAGTCCAAGAACAAGGAGGAGAAGACCAGACCAACTACGCCCAAAAAATCTCAGCCGTGGGTTCAGCAGTGAGTGGAAAAGCAGTAGCAGCGAAGGATTTTGTGGCATCAAAGCTAGGGTATGGAGAAACAACTGAGGAAACCACCACCAACAAGTCATCTTCGTCTTCACCGTTAGAGTACGGCAAAAAGATAGCATTAACAGTGACAGAGAAGTTAAAGCCAGGGGAAGAAGACAGAGCATTGTCAGAAGTAATTTCAGAGGCTTGGACTAGAAGGAAGGATGAGGTAGTTAAAGTTGGAGAAAGTGCTTTTGGACGGCCACCCTCTAAAGGGGAGGTGACGGAGTCGGAGGAGTTGACACGGCGGCTTGGGAAAGAGGATAAGGAAGCGACAGAGAAATCCTCTGTTGCGAGGGCTGCAGCAGCGACAGGGAGGAGTGTGGTGGGTATGGTGAAAGATACGGTGGGGTCGTGGCTGGGAAATGCTGGAGAGCAATCGGTGCCATCGCAACAATCACTTGGTACTTCACAAGGTAACTTAACTAGTGTCTAGTTGAGGGTTTTGTGATTGTTTGGTTTTATCTGTTAATTTTATATTTTTGTGGGAATAATTTGAAAAGGTGTCGAGGGTTTTGTGGATTCTTCTTCATCACGGCGGCAGGCGGAGCATGGTGGTAAGGGGGCGGAGGTGCGGAGACTTCAGGGTTCGGCGAATTAAAGCAGTTAGCACACAGATTTCAGCTTCTTTTTTTTTTTTTTTTT

mRNA sequence

ATGAAAGTTGACGACAAAGAACCGAACCGCACCGGTTCACCACGTGGATTAGTCCAAGAACAAGGAGGAGAAGACCAGACCAACTACGCCCAAAAAATCTCAGCCGTGGGTTCAGCAGTGAGTGGAAAAGCAGTAGCAGCGAAGGATTTTGTGGCATCAAAGCTAGGGTATGGAGAAACAACTGAGGAAACCACCACCAACAAGTCATCTTCGTCTTCACCGTTAGAGTACGGCAAAAAGATAGCATTAACAGTGACAGAGAAGTTAAAGCCAGGGGAAGAAGACAGAGCATTGTCAGAAGTAATTTCAGAGGCTTGGACTAGAAGGAAGGATGAGGTAGTTAAAGTTGGAGAAAGTGCTTTTGGACGGCCACCCTCTAAAGGGGAGGTGACGGAGTCGGAGGAGTTGACACGGCGGCTTGGGAAAGAGGATAAGGAAGCGACAGAGAAATCCTCTGTTGCGAGGGCTGCAGCAGCGACAGGGAGGAGTGTGGTGGGTATGGTGAAAGATACGGTGGGGTCGTGGCTGGGAAATGCTGGAGAGCAATCGGTGCCATCGCAACAATCACTTGGTACTTCACAAGGTGTCGAGGGTTTTGTGGATTCTTCTTCATCACGGCGGCAGGCGGAGCATGGTGGTAAGGGGGCGGAGGTGCGGAGACTTCAGGGTTCGGCGAATTAA

Coding sequence (CDS)

ATGAAAGTTGACGACAAAGAACCGAACCGCACCGGTTCACCACGTGGATTAGTCCAAGAACAAGGAGGAGAAGACCAGACCAACTACGCCCAAAAAATCTCAGCCGTGGGTTCAGCAGTGAGTGGAAAAGCAGTAGCAGCGAAGGATTTTGTGGCATCAAAGCTAGGGTATGGAGAAACAACTGAGGAAACCACCACCAACAAGTCATCTTCGTCTTCACCGTTAGAGTACGGCAAAAAGATAGCATTAACAGTGACAGAGAAGTTAAAGCCAGGGGAAGAAGACAGAGCATTGTCAGAAGTAATTTCAGAGGCTTGGACTAGAAGGAAGGATGAGGTAGTTAAAGTTGGAGAAAGTGCTTTTGGACGGCCACCCTCTAAAGGGGAGGTGACGGAGTCGGAGGAGTTGACACGGCGGCTTGGGAAAGAGGATAAGGAAGCGACAGAGAAATCCTCTGTTGCGAGGGCTGCAGCAGCGACAGGGAGGAGTGTGGTGGGTATGGTGAAAGATACGGTGGGGTCGTGGCTGGGAAATGCTGGAGAGCAATCGGTGCCATCGCAACAATCACTTGGTACTTCACAAGGTGTCGAGGGTTTTGTGGATTCTTCTTCATCACGGCGGCAGGCGGAGCATGGTGGTAAGGGGGCGGAGGTGCGGAGACTTCAGGGTTCGGCGAATTAA

Protein sequence

MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGETTEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAGEQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN*

Homology

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BLAST of CsaV3_3G049950 vs. NCBI nr
Match: KAE8651475.1 (hypothetical protein Csa_002632 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
           TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA
Sbjct: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG
Sbjct: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN
Sbjct: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 226

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BLAST of CsaV3_3G049950 vs. NCBI nr
Match: XP_031739118.1 (low-temperature-induced 65 kDa protein isoform X1 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 220 MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 279

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
           TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA
Sbjct: 280 TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 339

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG
Sbjct: 340 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 399

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN
Sbjct: 400 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 445

[Close]

BLAST of CsaV3_3G049950 vs. NCBI nr
Match: XP_011652891.1 (low-temperature-induced 65 kDa protein isoform X2 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 217 MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 276

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
           TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA
Sbjct: 277 TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 336

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG
Sbjct: 337 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 396

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN
Sbjct: 397 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 442

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BLAST of CsaV3_3G049950 vs. NCBI nr
Match: XP_008465872.2 (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 1.0e-98
Identity = 206/226 (91.15%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDK+PNRTGSP GL QE GGED  NYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 214 MKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 273

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
            E TT +KSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEA  RRKDEVVKVGESA
Sbjct: 274 KEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGESA 333

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKG VTESEELTRRLG+EDKEATEKSSVA AAAATGRSVVGMVKDTVGSWLG AG
Sbjct: 334 FGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGKAG 393

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQS PSQQSLGTSQGVEGFVD SSSRRQAEHGG GAEVR LQGSAN
Sbjct: 394 EQSAPSQQSLGTSQGVEGFVDDSSSRRQAEHGGTGAEVRVLQGSAN 439

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BLAST of CsaV3_3G049950 vs. NCBI nr
Match: KAA0038494.1 (low-temperature-induced 65 kDa protein [Cucumis melo var. makuwa] >TYK31088.1 low-temperature-induced 65 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 1.0e-98
Identity = 206/226 (91.15%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDK+PNRTGSP GL QE GGED  NYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 134 MKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 193

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
            E TT +KSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEA  RRKDEVVKVGESA
Sbjct: 194 KEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGESA 253

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKG VTESEELTRRLG+EDKEATEKSSVA AAAATGRSVVGMVKDTVGSWLG AG
Sbjct: 254 FGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGKAG 313

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQS PSQQSLGTSQGVEGFVD SSSRRQAEHGG GAEVR LQGSAN
Sbjct: 314 EQSAPSQQSLGTSQGVEGFVDDSSSRRQAEHGGTGAEVRVLQGSAN 359

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BLAST of CsaV3_3G049950 vs. ExPASy Swiss-Prot
Match: Q04980 (Low-temperature-induced 65 kDa protein OS=Arabidopsis thaliana OX=3702 GN=LTI65 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-09
Identity = 77/250 (30.80%), Postives = 103/250 (41.20%), Query Frame = 0


Query: 27  TNYAQKISAVGSAVSGKAVAAKDFVASKLGY----GETTEETTTNKSSSSSPLEYGKKIA 86
           + Y +++++  SA++ KA+AAK+ VASKLGY    G    E+     +  S   YG+K+A
Sbjct: 380 STYTEQLASATSAITNKAIAAKNVVASKLGYTGENGGGQSESPVKDETPRSVTAYGQKVA 439

Query: 87  LTV------------------------------------------------TEKLKPGEE 146
            TV                                                +EKLKPGEE
Sbjct: 440 GTVAEKLTPVYEKVKETGSTVMTKLPLSGGGSGVKETQQGEEKGVTAKNYISEKLKPGEE 499

Query: 147 DRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVA 206
           D+ALSE+I+E         +  G    G    K   T+  E+T      D+ A  K    
Sbjct: 500 DKALSEMIAEK--------LHFG----GGGEKKTTATKEVEVTVEKIPSDQIAEGKGHGE 559

Query: 207 RAA--AATGRSVVGMVKDTVGSWLGNAGEQSVP-----SQQSLGTSQGVEGFVDSSSSRR 218
             A     G  +VG VK  V SWLG  G+   P     S QSLGT+ G  GF DS  S  
Sbjct: 560 AVAEEGKGGEGMVGKVKGAVTSWLG--GKPKSPRSVEESPQSLGTTVGTMGFSDSGGSEL 615

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BLAST of CsaV3_3G049950 vs. ExPASy TrEMBL
Match: A0A0A0LIE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914030 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.0e-112
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 120 MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 179

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
           TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA
Sbjct: 180 TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 239

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG
Sbjct: 240 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 299

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN
Sbjct: 300 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 345

[Close]

BLAST of CsaV3_3G049950 vs. ExPASy TrEMBL
Match: A0A5D3E5L4 (Low-temperature-induced 65 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003650 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.9e-99
Identity = 206/226 (91.15%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDK+PNRTGSP GL QE GGED  NYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 134 MKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 193

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
            E TT +KSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEA  RRKDEVVKVGESA
Sbjct: 194 KEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGESA 253

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKG VTESEELTRRLG+EDKEATEKSSVA AAAATGRSVVGMVKDTVGSWLG AG
Sbjct: 254 FGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGKAG 313

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQS PSQQSLGTSQGVEGFVD SSSRRQAEHGG GAEVR LQGSAN
Sbjct: 314 EQSAPSQQSLGTSQGVEGFVDDSSSRRQAEHGGTGAEVRVLQGSAN 359

[Close]

BLAST of CsaV3_3G049950 vs. ExPASy TrEMBL
Match: A0A1S3CPX7 (low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.9e-99
Identity = 206/226 (91.15%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 60
           MKVDDK+PNRTGSP GL QE GGED  NYAQKISAVGSAVSGKAVAAKDFVASKLGYGET
Sbjct: 214 MKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 273

Query: 61  TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 120
            E TT +KSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEA  RRKDEVVKVGESA
Sbjct: 274 KEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGESA 333

Query: 121 FGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAG 180
           FGRPPSKG VTESEELTRRLG+EDKEATEKSSVA AAAATGRSVVGMVKDTVGSWLG AG
Sbjct: 334 FGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGKAG 393

Query: 181 EQSVPSQQSLGTSQGVEGFVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
           EQS PSQQSLGTSQGVEGFVD SSSRRQAEHGG GAEVR LQGSAN
Sbjct: 394 EQSAPSQQSLGTSQGVEGFVDDSSSRRQAEHGGTGAEVRVLQGSAN 439

[Close]

BLAST of CsaV3_3G049950 vs. ExPASy TrEMBL
Match: A0A6J1DNM6 (low-temperature-induced 65 kDa protein-like OS=Momordica charantia OX=3673 GN=LOC111022758 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-32
Identity = 101/192 (52.60%), Postives = 123/192 (64.06%), Query Frame = 0


Query: 1   MKV-DDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGE 60
           MKV D+   NR G+       + G+ Q++Y QKISAVGSA++G A++AKDFVASKLGYG 
Sbjct: 206 MKVNDENRANRAGN-------EAGDQQSSYGQKISAVGSALAGTAISAKDFVASKLGYGV 265

Query: 61  TTEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGES 120
            T E    +    S  EY       + +KL+PGE+DRAL E ISEA+ +RK+EV      
Sbjct: 266 RTGE---GEDKGVSVKEY-------LAQKLEPGEDDRALLEAISEAFQKRKEEV------ 325

Query: 121 AFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNA 180
                P K EVTESEELTRRLG+ED   TE+SS A A AA  RSVV  VKDTVGSW+G  
Sbjct: 326 -----PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKG 368

Query: 181 GEQSVPSQQSLG 192
           G+ S PSQQ  G
Sbjct: 386 GD-SPPSQQQQG 368

[Close]

BLAST of CsaV3_3G049950 vs. ExPASy TrEMBL
Match: A0A6J1I850 (low-temperature-induced 65 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111470536 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 107/208 (51.44%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 19  QEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGETTEETTTNKSSSSSPLEYG 78
           ++    DQ +YAQKISAVGSAVSGKAVAAKDFVAS                         
Sbjct: 183 EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS------------------------- 242

Query: 79  KKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTR 138
            KIALTVTEKLKPGEEDRALSEVISEA+ RRK EVVKVGESAF R P+KG VTES     
Sbjct: 243 -KIALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVGESAF-REPTKGSVTES----- 302

Query: 139 RLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNAGEQSVPSQQSLGTSQGVEG 198
                                 GRSVVGMVKDTVGSWLG AG+QS               
Sbjct: 303 ----------------------GRSVVGMVKDTVGSWLGKAGDQS--------------- 318

Query: 199 FVDSSSSRRQAEHGGKGAEVRRLQGSAN 227
              +   R   +HGG  AEVR  Q SAN
Sbjct: 363 ---AGQGRPGKDHGGTEAEVRIPQESAN 318

[Close]

BLAST of CsaV3_3G049950 vs. TAIR 10
Match: AT5G52300.1 (CAP160 protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 77/250 (30.80%), Postives = 103/250 (41.20%), Query Frame = 0


Query: 27  TNYAQKISAVGSAVSGKAVAAKDFVASKLGY----GETTEETTTNKSSSSSPLEYGKKIA 86
           + Y +++++  SA++ KA+AAK+ VASKLGY    G    E+     +  S   YG+K+A
Sbjct: 380 STYTEQLASATSAITNKAIAAKNVVASKLGYTGENGGGQSESPVKDETPRSVTAYGQKVA 439

Query: 87  LTV------------------------------------------------TEKLKPGEE 146
            TV                                                +EKLKPGEE
Sbjct: 440 GTVAEKLTPVYEKVKETGSTVMTKLPLSGGGSGVKETQQGEEKGVTAKNYISEKLKPGEE 499

Query: 147 DRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVA 206
           D+ALSE+I+E         +  G    G    K   T+  E+T      D+ A  K    
Sbjct: 500 DKALSEMIAEK--------LHFG----GGGEKKTTATKEVEVTVEKIPSDQIAEGKGHGE 559

Query: 207 RAA--AATGRSVVGMVKDTVGSWLGNAGEQSVP-----SQQSLGTSQGVEGFVDSSSSRR 218
             A     G  +VG VK  V SWLG  G+   P     S QSLGT+ G  GF DS  S  
Sbjct: 560 AVAEEGKGGEGMVGKVKGAVTSWLG--GKPKSPRSVEESPQSLGTTVGTMGFSDSGGSEL 615

[Close]

BLAST of CsaV3_3G049950 vs. TAIR 10
Match: AT5G52300.2 (CAP160 protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 77/250 (30.80%), Postives = 103/250 (41.20%), Query Frame = 0


Query: 27  TNYAQKISAVGSAVSGKAVAAKDFVASKLGY----GETTEETTTNKSSSSSPLEYGKKIA 86
           + Y +++++  SA++ KA+AAK+ VASKLGY    G    E+     +  S   YG+K+A
Sbjct: 379 STYTEQLASATSAITNKAIAAKNVVASKLGYTGENGGGQSESPVKDETPRSVTAYGQKVA 438

Query: 87  LTV------------------------------------------------TEKLKPGEE 146
            TV                                                +EKLKPGEE
Sbjct: 439 GTVAEKLTPVYEKVKETGSTVMTKLPLSGGGSGVKETQQGEEKGVTAKNYISEKLKPGEE 498

Query: 147 DRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVA 206
           D+ALSE+I+E         +  G    G    K   T+  E+T      D+ A  K    
Sbjct: 499 DKALSEMIAEK--------LHFG----GGGEKKTTATKEVEVTVEKIPSDQIAEGKGHGE 558

Query: 207 RAA--AATGRSVVGMVKDTVGSWLGNAGEQSVP-----SQQSLGTSQGVEGFVDSSSSRR 218
             A     G  +VG VK  V SWLG  G+   P     S QSLGT+ G  GF DS  S  
Sbjct: 559 AVAEEGKGGEGMVGKVKGAVTSWLG--GKPKSPRSVEESPQSLGTTVGTMGFSDSGGSEL 614

[Close]

BLAST of CsaV3_3G049950 vs. TAIR 10
Match: AT4G25580.1 (CAP160 protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 82/267 (30.71%), Postives = 112/267 (41.95%), Query Frame = 0


Query: 12  GSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGY-GETTEETTTNKSS 71
           G  RG  +E    +Q++Y  KIS   S V+ KAVAAK+ VASKLGY GE   E     + 
Sbjct: 371 GQRRG--EEMHQPNQSSYTDKISLATSVVADKAVAAKNAVASKLGYSGEGGHENRVEGAE 430

Query: 72  S-SSPLEYGKKIALTV---------------------------------------TEKLK 131
           + SS   YG  +A  V                                       TEKL 
Sbjct: 431 NPSSAGGYGSTVASMVTPVYEKVKETGASVMTKLPFTGTGTEQGQDRGVSAKEFLTEKLS 490

Query: 132 PGEEDRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTRRLG---KEDKEA 191
           PGEED+ALSEV++E       ++   G      PP +G VT+SEE+ +RLG       EA
Sbjct: 491 PGEEDKALSEVVTE-------KLHLGGGGGETAPPKRGIVTQSEEVEKRLGGFKDPSSEA 550

Query: 192 TEKSSVARAAAATGRSVVGMVKDTVGSWLGNAGEQSV--------PSQQSLGTSQGVEGF 227
             K   A A    G  +   ++  V SW+    E+           S QSLG++ G +  
Sbjct: 551 ATKQGEAYAEKGEG-GIAEKLRGAVTSWIAGTTEEVTQKSTESVQDSTQSLGSTIGNKMG 610

The following BLAST results are available for this feature:

BLAST of CsaV3_3G049950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651475.1	2.1e-112	100.00	hypothetical protein Csa_002632 [Cucumis sativus]	[more]
XP_031739118.1	2.1e-112	100.00	low-temperature-induced 65 kDa protein isoform X1 [Cucumis sativus]	[more]
XP_011652891.1	2.1e-112	100.00	low-temperature-induced 65 kDa protein isoform X2 [Cucumis sativus]	[more]
XP_008465872.2	1.0e-98	91.15	PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo]	[more]
KAA0038494.1	1.0e-98	91.15	low-temperature-induced 65 kDa protein [Cucumis melo var. makuwa] >TYK31088.1 lo...	[more]

BLAST of CsaV3_3G049950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04980	4.5e-09	30.80	Low-temperature-induced 65 kDa protein OS=Arabidopsis thaliana OX=3702 GN=LTI65 ...	[more]

BLAST of CsaV3_3G049950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIE7	1.0e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914030 PE=4 SV=1	[more]
A0A5D3E5L4	4.9e-99	91.15	Low-temperature-induced 65 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CPX7	4.9e-99	91.15	low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 P...	[more]
A0A6J1DNM6	2.3e-32	52.60	low-temperature-induced 65 kDa protein-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1I850	1.9e-31	51.44	low-temperature-induced 65 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CsaV3_3G049950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52300.1	3.2e-10	30.80	CAP160 protein	[more]
AT5G52300.2	3.2e-10	30.80	CAP160 protein	[more]
AT4G25580.1	1.6e-09	30.71	CAP160 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012418	CAP160	PFAM	PF07918	CAP160	coord: 33..58 e-value: 1.8E-7 score: 30.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..75
None	No IPR available	PANTHER	PTHR33836:SF15	SUBFAMILY NOT NAMED	coord: 80..226
None	No IPR available	PANTHER	PTHR33836:SF15	SUBFAMILY NOT NAMED	coord: 1..86
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 1..86
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 80..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G049950.1	CsaV3_3G049950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid