CsaV3_3G048970 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G048970
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 39969035 .. 39970229 (-)
RNA-Seq ExpressionCsaV3_3G048970
SyntenyCsaV3_3G048970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACAAAATTTGAACTTCTAGGTGAGTTGACTGTCAGAATTGTTTCTTGCATGGCATGTGCCATTGTTGGCTAATATATATGTGTGTAATTTTCTCAAGCTCTTTTCGAGTTCATTTTGGTTTATCATCAAATAAAATTGCCAATAAAAGAATTAAATACAAAAGCTTTCATGGTTCATTAATACGGTAAGACCCAATAAGATGATGAACAAATATAGGACAGAAAGACTTGATGATGAAATAGGAATCTCTAAAAGTCTCTGTAACTGGTGGGGTTTAATAATTATGTTATGTTGCATCATGTTAGTGTAACACTATAGTTCCTTTGATCATAATGAATACTTCCAATAAACGTGGCTTGGCAATCTTTGACATTTGGTTCTTGTATTGGCCCATGCTCTTAAGTATTATTGTCGTATTACCTCCAAGTTCTGTGGTGTAAAATATCATTAAGTAAAAGATCTAGTTTTCATACCCTTAAATGATGTTCTGTCGTCTGTTGATGAAACAAACTAGTGTGATGTTAAGTTGTTCGAACAAAACTTTGCAAGCTTTTTTTGGCTGTAGATTATTTTAGAAGTATGTAAAAACTTGGAACACTGCTATGATGTTATTGTTCAGCTGACAATCCCGTGTTAGTGTTATTTGTTGCTTTCTTCTAACAGCTATGCTGACAGAGAAAATTTGTACTCTAAATAAATCGATTGTACATTGCAATTAATTTTCTTGCCTCCAGGGGAACGTTAATCGAGGATACCGTTTGTTGTGTCGCCGGATAATTATTTGATTTGTGTCTGTGATACGCCAAAGTTGTAGGATGGTTTAGCAGATGATGAGAAGCGTATTGGGCTGTCTGTGCAGATCCAGATAGGAGTAGTATTCATCAATTTCTCGATTCGACGAAAGTCACGGGCGTTGAAGGAGGTAGGAATATGAAGTTATATCTTCGCTTTTCATCCATTCCACTGGTCAGATCAGTGCCTTGTTGACGTTATTGATAAGATTTATGCCATTTCTGTGCATTGTGGAACTTGCAATACTAAATATTCCTGTTCTAAGTGCATTTTCTCTATGTAGGTGACCACATTAGAACACATGGTAAACATGCCATCTATAGCCAACAATGGAGGTTTTGAACAAGAACCTGATCTGTTTGGAAATATATTCCCTTTTTGGTTCATTGAAGTTTGA

mRNA sequence

ATGGAGACAAAATTTGAACTTCTAGGTGAGTTGACTGTCAGAATTGTTTCTTGCATGGCATGTGCCATTGATGGTTTAGCAGATGATGAGAAGCGTATTGGGCTGTCTGTGCAGATCCAGATAGGAGTAGTATTCATCAATTTCTCGATTCGACGAAAGTCACGGGCGTTGAAGGAGGTGACCACATTAGAACACATGGTAAACATGCCATCTATAGCCAACAATGGAGGTTTTGAACAAGAACCTGATCTGTTTGGAAATATATTCCCTTTTTGGTTCATTGAAGTTTGA

Coding sequence (CDS)

ATGGAGACAAAATTTGAACTTCTAGGTGAGTTGACTGTCAGAATTGTTTCTTGCATGGCATGTGCCATTGATGGTTTAGCAGATGATGAGAAGCGTATTGGGCTGTCTGTGCAGATCCAGATAGGAGTAGTATTCATCAATTTCTCGATTCGACGAAAGTCACGGGCGTTGAAGGAGGTGACCACATTAGAACACATGGTAAACATGCCATCTATAGCCAACAATGGAGGTTTTGAACAAGAACCTGATCTGTTTGGAAATATATTCCCTTTTTGGTTCATTGAAGTTTGA

Protein sequence

METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEVTTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV*
Homology
[Close]
BLAST of CsaV3_3G048970 vs. NCBI nr
Match: KGN60365.1 (hypothetical protein Csa_000705 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEV 60
          METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEV
Sbjct: 1  METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEV 60

Query: 61 TTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV 97
          TTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV
Sbjct: 61 TTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV 96

[Close]
BLAST of CsaV3_3G048970 vs. ExPASy TrEMBL
Match: A0A0A0LE98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901110 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.0e-47
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEV 60
          METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEV
Sbjct: 1  METKFELLGELTVRIVSCMACAIDGLADDEKRIGLSVQIQIGVVFINFSIRRKSRALKEV 60

Query: 61 TTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV 97
          TTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV
Sbjct: 61 TTLEHMVNMPSIANNGGFEQEPDLFGNIFPFWFIEV 96

The following BLAST results are available for this feature:
BLAST of CsaV3_3G048970 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60365.11.4e-46100.00hypothetical protein Csa_000705 [Cucumis sativus][more]
BLAST of CsaV3_3G048970 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G048970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE987.0e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901110 PE=4 SV=1[more]
BLAST of CsaV3_3G048970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G048970.1CsaV3_3G048970.1mRNA