CsaV3_3G047410 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G047410
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Rhomboid-like protein 11
Location	chr3: 38702726 .. 38707654 (-)
RNA-Seq Expression	CsaV3_3G047410
Synteny	CsaV3_3G047410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTACTCCACCGATTTATCCAATTAGCTTATCGCTCTCAAATTTCCAATGCAACTTCAGTTGCAGCAGCAGCTGCTTCATGGAGGCCGAATTTCGAAACCTCCAACGCTATGCAACAACCAAATGCCTTTAACTTCCATTTCTTTTCAATCCAGCTTCACCTTAACCTCACTCAGATTTTCATCTCCATTTCTCCATTCCCTTCCCCAATTTACCCATGTTCTTCCTCTCCACTCGCGTTTCTTTTGTATGAAACCCATCGCGACCTGCAAGATGAACGATGCAGGTTCTCCTTTTATTTTTTCCGCTTTTTGGAACAGTATCTTAATCTGTTTCCTTATGATTTTATAGAGGAATTTTTCGATTTTGTTTGATGAAAGACGTGTGCGGTTGAATGAAAGTAAAAAAAGAATTTTGTGTTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTGGGAAAACCACTGCAGAATCGGAAAACGGAGAAGCGTGTTAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACGTTTTTCAGGTAGGGTTTTTGTTCTCTTATGTTTACTTTTCACGTCGTTGCCTTTCGATAGAGTGAAAAACAATTCCCTCAAAATAGCTAGCTCTCAGAGGTCAGGCCACTAGGGATTGATAGTTGAAGTTTTCTCATTGGGGAAGGTGAGGAACAAAGTTGCTCGACAGTAGCTGCAGCTCTTTTCTTTCAAGTAGGCCCAGCACAGGAAATAGCTCGAAATGCATAATCCTTCTGATGATTTATATCCAGCAAATCAAAAAATAAAACCATTTCGTTCAACATATCCATCCTTTCCATCCACATTTGAAAACGACTCGTAGCACCCTTATTCCCATTTCAAAATTTCATATTCCATTTCCCATTCAGAGATGCTATCCGAGTAGGAAAGTTAGCCAAGTTATCCTGCCTAGTTTAGATAAAGCATCCCGGATCAGACTTGAGATTCATTTGATGTTCATCAATGTGCTGTATCATCATAAGTTTCAATAAACTAGGCCCTCCTCCTTGTCTTTCATCAATGTGCTGTATCATCAGACTTGAGATTCCTTGTCTTGAAGAAAGTCTACCGGTTGATAGTTTATTAGGTCGACTATATCATAAAAAAGATAGTTGTTTAGGTCAAAACTTTTTGTAACTTTTACCCATCTAAACGAATAAACTATTTGTCAAAGCTGATTATTGTAGAGTTTTAAGACTATGATCCACTGGAAAGCAGATCGGGTTATTAGCTATTAACCTTTTCTTTAGAGGATATGAAAGACACAACATGACGACCTACCAAAAAAAAAAAAAGACATTCAAGACAGAAACCAGAATGAGCATTGCAAAAAAAGGGGATCAATTGGTACAATAATATATTATATACATAATTGTTAAGTACAAAAGGGTTTTTTTTAGAGAGTTTATCACATTAGAGTCAAACTATCGTAAGTAAATCAAATAAGTCTCCAAAGTCTCTTTGAGAGCCACTGAAAGTTCTCCAATTGCTCCCCTTCCACTGCTATCAAAGACCACAATTATTGCAGTTTTCCTCCCAGACATACTTCAGCTTTTCTTTGAAGCATGGCTTCAAAGAAAATCCTCAACAATGACTTAGATAGTCTATGGCTTGCTCCAACAACAACCGAACTTATAAAATAGCTGTTCCCATAATATTGAAGCATAAGTAGAGCATAAGGATGCCTTTGGTAGTCTCACTAGTCTTGCACAAAATGCAACAATTGGGAAGAAGAAAAGAATCTAAAAACTGTCTTTTAAGCACATTATGGGGGAGTTGAGTTTCCACAACAAAGTAGTTCATGAAAGTACTCTCACCTTTATTTGTATCCTTTTCCTCAATAGTGTTTGGAGCCCTCAGATGATGAACAAAGAGGGATTTACACTTTCAAAGCTTCCAAAAACGAAATCCTTTTGTCCTCTCTGGAATCAAGATCCATAGTAGTCAACAAAACAGTCAAAACTCAATTTCATTTCTGAAAGATTCATTCTAAGAGTTAGAGTCATTCTGAGCCTATCCATGAATCCATGATTATTAACAATTGAAAGGCTTTCCTATAGTCTTGCTTCAGGTAGGGGTTTTCTTTACCCATTACCTTTATGCTGTCTTTCTGTTACCTATGAAGAAAATGAAAAAAGGAGTTCCCGGTTATTTTTCCTCACCTTATCCCACGTTTGCAACGAACATCTCAAATTCTGCCCATTATAGACGTTGGCATGCCAGAGCTTTGTTACTGGAGACCTAATTCACTATACCCAAACTTCCTCCCGCCAACAAAAGAGAAACCAATAATCATCAAATGAAGTGACAAAAACAGGTGTTTTTAACTATCTGTTTTAAATGTTAACATAGAAAAGAATGAAAGACTCCAACCTTGTTTGATAACCATTTTTCTTTAGTGATTTTTTTATTTTCTTATTTTTAAACATTGTTCTTGATCCATTCTCACAATTTATTCATTTTAATTTTTTTTGCCTCGCCTGTAGAAACATTTGGGTTTTTAGCCAAACTCAAAAAATTGAAACTACTTTTTATAGTTTTTAAAACATGACATGAATTTTGAAAACTGTTCGTGATTTATAATTAAATTTACCTTCTACCACCAACTTAAGCTTTTGGATGAATTAGTTATTTAATAAAAACATTTAGAAGTAGAGAAAAAAACAAACTCACTAGTAGAAGAAGTATTTATACATGTTCACAAAATACTAAATGGTTATCAAACGTTGTCTAAATTTTCATTTTCGTAGGTTCGTAATATAGGAGCTTTGTACCTGTATCACAGTCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCACGCTAATTGGTGAGTTTTTTTGGCTGTTCAAAATCATCCAAATTTCAGATTGTTTACACACACACAGAGGCAGAAGCTTGCTTATCTTCTCATGAGAATGCAATTTGCTGCTTTTACAAGCATTGTTTAATGTAGTTCTTGCTATTCTGAATGTTTGCAGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGTGAGAAACATCTTCCAAATCCTTATTATTTTTTCTCCCTATAATGGGATCAACTTTCTTTCTGGACATCAAAACCATAAAATAACCAAAATGTTTTGACATTTAATAGTTCCATTATGTGTGATCAACAGGGAAACTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCAGGTGCTGTTTTCGGTTTGTTTACCATAAGTGTTCTTGTAAAGGTATCTATCTAAAACATAATGATTCATTACTCTCATTAGAAATTTAATACAACATTTTTAATGAAGTAATTTCTTCGTGCCAGATGTCTTGGGATTGGAGGAAGATACTTGAAGTCCTTATACTTGGCCAATTCGTAATAGAGAAGGTAAAGTTCTCTTTTTGCCCTCATGTACATGATCTTAAAAACGCAAATACTAAGCATCCTTCCCAAGATGGGGATTGGTTAGGAATGAAATACTCGGGCATAGGATATAATGTTCCTTCTTTCCATATCCCTAGTTAATTGCTAATTTGTCATATCTTGATTTTTTTTTAAAATGTATTTTTAAGTACAACTTGGGGGAGGATTTGAACTCAAGACCTTTTGTCCTCATGAACGTACAGATGTTTGTTAAGCTAAAAACTCATGTTGGCTATCGTATCTTGATTTTCCTCTAATTAGAATGAACTAGCCTTGGTTTTCCTTTTCCTTTCTATAATATAGGAATCATCTTTAAATTGGCATACGGTTCTCGAGACTTTTGTTTTTCTTCTTTCCCACCTCCTTCAAAGCCACTTTTTCCAGAAGGAAAGAAGAAGCTTCTTTGGGAGAACTTTATTTTTTAAGCATTCTATTGGAACATATGGTGAAATAGAAGAATCTTCCCCCCCAAAAAAAGTCTGATTTTAACTTTTTAATGCTACACTTAATACGGTTTTGACATGGTGTAAATGGCTCTTTTTACTCTAGCACTGTATACTTTCTTTTTTTTTGGAAAGGTGACAAGCTTCTTTATTGATAATAATACTCAAAGTACAAGAGAGTTATACATTGAGAATAATAGAGAAGCCTAGAAAAAAAAAGAGGGAGATAGATAGTTGTACACTACTATAGGCTTTTCTACTCTCCCTTCCGATTGTAATCTTCTTATTGGCACGTTACCCTTTTGTAATTTCATAGCATCAATGAAACCGTTTCTCTTCCGTGCAAGGCAAAGGTATGTGACACTTGCTTATTCATTTGTTATTTTCCCTGCTCATAATAGGTCATGGAAGCAGCTCAAGCATCAACTGCATTGTCGGGAAGCTTCCGTGGATATTCGTTGCAGAATGTGAACCATGTTGCACATCTCTCCGGGGCGCTGGTTGGTGTCCTTCTGGTATGGCTTCTTAGTAGAGTTCCTTCTCAATCTTCTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGATTCCAATAGGCCATTCCACTTCGAAATTGAAATGTATTTCAGTTGTATAATATGTGTTCTTTGTTTGTATCTTCTCTTAAATATTTCAGCTACAGTTTTGATTATAGGCTGTGAATGTGAATCATTACAATTTCTCTTAAACATTAGATATATCAACCATTACAATTTCTCCAAAAGTATGAACAATGGCTATGTTTTCTTCGAAAACATTTAATAGAATCCTAAATTTAAGCAAGTGTTACGAGAGGTTTAATTTTCGTTATTTAATGCACTAATTTTAGCTACAGAAGGTGTATTCTTTTTCCATCAACATCAATAAAATAAAGCTTTGTAC

mRNA sequence

ATGCAGTTGGAGCTGGGAAAACCACTGCAGAATCGGAAAACGGAGAAGCGTGTTAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACGTTTTTCAGGTTCGTAATATAGGAGCTTTGTACCTGTATCACAGTCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCACGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGGAAACTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCAGGTGCTGTTTTCGGTTTGTTTACCATAAGTGTTCTTGTAAAGATGTCTTGGGATTGGAGGAAGATACTTGAAGTCCTTATACTTGGCCAATTCGTAATAGAGAAGGTCATGGAAGCAGCTCAAGCATCAACTGCATTGTCGGGAAGCTTCCGTGGATATTCGTTGCAGAATGTGAACCATGTTGCACATCTCTCCGGGGCGCTGGTTGGTGTCCTTCTGGTATGGCTTCTTAGTAGAGTTCCTTCTCAATCTTCTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGA

Coding sequence (CDS)

ATGCAGTTGGAGCTGGGAAAACCACTGCAGAATCGGAAAACGGAGAAGCGTGTTAATGGTATATTCTGGATTATTCTTCTCAACATTGGAATATATGTGGCTGATCACGTTTTTCAGGTTCGTAATATAGGAGCTTTGTACCTGTATCACAGTCGTCCTGCTTGGTATCAATTTTTTACAGCAACATTTTGTCACGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGGAAACTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTTTCAGTTGGAGCTTCAGGTGCTGTTTTCGGTTTGTTTACCATAAGTGTTCTTGTAAAGATGTCTTGGGATTGGAGGAAGATACTTGAAGTCCTTATACTTGGCCAATTCGTAATAGAGAAGGTCATGGAAGCAGCTCAAGCATCAACTGCATTGTCGGGAAGCTTCCGTGGATATTCGTTGCAGAATGTGAACCATGTTGCACATCTCTCCGGGGCGCTGGTTGGTGTCCTTCTGGTATGGCTTCTTAGTAGAGTTCCTTCTCAATCTTCTGATCAAGATGCATCAGCTTTGCATAGGAAAGGAAGATGA

Protein sequence

MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR*

Homology

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BLAST of CsaV3_3G047410 vs. NCBI nr
Match: XP_004136298.1 (rhomboid-like protein 11, chloroplastic isoform X2 [Cucumis sativus] >KGN60346.2 hypothetical protein Csa_001097 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFT 60
           MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFT
Sbjct: 1   MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFT 60

Query: 61  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSV 120
           ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSV
Sbjct: 61  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSV 120

Query: 121 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQN 180
           GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQN
Sbjct: 121 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQN 180

Query: 181 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR
Sbjct: 181 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 220

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BLAST of CsaV3_3G047410 vs. NCBI nr
Match: XP_011652547.1 (rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 6.5e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNV 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNV
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNV 263

Query: 182 NHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           NHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR
Sbjct: 264 NHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 302

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BLAST of CsaV3_3G047410 vs. NCBI nr
Match: XP_008466246.1 (PREDICTED: rhomboid-like protein 11, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 7.4e-115
Identity = 212/221 (95.93%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFT 60
           MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFT
Sbjct: 1   MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFT 60

Query: 61  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSV 120
           ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSV
Sbjct: 61  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSV 120

Query: 121 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR-GYSLQ 180
           GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR G+  Q
Sbjct: 121 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQ 180

Query: 181 NVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           NVNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 181 NVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 221

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BLAST of CsaV3_3G047410 vs. NCBI nr
Match: XP_008466245.1 (PREDICTED: rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis melo] >TYK31329.1 rhomboid-like protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR-GYSLQN 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR G+  QN
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQN 263

Query: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           VNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 264 VNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 303

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BLAST of CsaV3_3G047410 vs. NCBI nr
Match: KAA0038717.1 (rhomboid-like protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 417.5 bits (1072), Expect = 7.0e-113
Identity = 211/221 (95.48%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK-VMEAAQASTALSGSFR-GYSLQ 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK VMEAAQASTALSGSFR G+  Q
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVVMEAAQASTALSGSFRGGHPSQ 263

Query: 182 NVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           NVNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 264 NVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 304

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BLAST of CsaV3_3G047410 vs. ExPASy Swiss-Prot
Match: Q84MB5 (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11 PE=1 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.1e-96
Identity = 173/211 (81.99%), Postives = 188/211 (89.10%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           Q EL K   NRK +KR NGIFWIIL+N+GIY+ADH FQVR I +LYLYH+ PAWYQF TA
Sbjct: 65  QFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTA 124

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNAVSVG
Sbjct: 125 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVG 184

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGS-FRGYSLQN 181
           ASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+ + GYSLQ 
Sbjct: 185 ASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQT 244

Query: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQD 212
           VNH+AHLSGALVGV+LVWLLS+ PS S DQD
Sbjct: 245 VNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

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BLAST of CsaV3_3G047410 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.1e-07
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 56  YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 115
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 116 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 175
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 176 FRGYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQ 211
                L  V++ AH+ G L G  L ++L   P    ++
Sbjct: 218 -----LPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

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BLAST of CsaV3_3G047410 vs. ExPASy Swiss-Prot
Match: P96617 (Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=ydcA PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-06
Identity = 40/145 (27.59%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 55  WYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILP 114
           W++  T    HA + HL  N   +++F   +E   G     L Y  +G+  NI +++  P
Sbjct: 58  WWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYVTEP 117

Query: 115 RNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR 174
            + V VGASGA+FGLF + + +        +    ++GQ   + ++     +  +S    
Sbjct: 118 LDYVHVGASGAIFGLFGVYLFM-------VLFRNELIGQEHSKMIITLLAFAVLMS---- 177

Query: 175 GYSLQNVNHVAHLSGALVGVLLVWL 200
            +   N+N +AHL G   G LL +L
Sbjct: 178 -FINSNINMMAHLFGLCGGFLLSFL 190

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BLAST of CsaV3_3G047410 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05
Identity = 51/175 (29.14%), Postives = 85/175 (48.57%), Query Frame = 0


Query: 50  HSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVS 109
           H    W +  +  + HA   HL +N+  L   G  +E++ G   + L Y+++G+G +I+S
Sbjct: 106 HEHQGW-RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILS 165

Query: 110 WLILPRNAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQAS 169
            L L + ++SVGASGA+FGL   ++L ++  +W         LI   F+I         +
Sbjct: 166 SLFL-QESISVGASGALFGLLG-AMLSELLTNWTIYANKAAALITLLFII-------AIN 225

Query: 170 TALSGSFRGYSLQNVNHVAHLSGALVGVLLVWLLSRVPS---QSSDQDASALHRK 219
            AL        L  V++ AH+ G L G  L ++L   P    ++S  + S   RK
Sbjct: 226 LALG------MLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASRTNTSRTKRK 264

[Close]

BLAST of CsaV3_3G047410 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = 0


Query: 40  VRNIGAL---YLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 99
           +  +GAL    + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L
Sbjct: 112 LEKMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 171

Query: 100 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVI 159
            Y+++G G +++S L   R  +SVGASGA+FGL   ++L ++  +W      +   +F  
Sbjct: 172 LYMISGFGGSLLSSL-FNRAGISVGASGALFGLLG-AMLSELLTNW-----TIYANKFAA 231

Query: 160 EKVMEAAQASTALSGSFRGYSLQNVNHVAHLSGALVGVLL 197
              +    A     G      L +V++ AHL G   G LL
Sbjct: 232 LLTLIFIIAINLAVG-----ILPHVDNFAHLGGFTSGFLL 258

[Close]

BLAST of CsaV3_3G047410 vs. ExPASy TrEMBL
Match: A0A0A0LEK4 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889110 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.2e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNV 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNV
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYSLQNV 263

Query: 182 NHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           NHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR
Sbjct: 264 NHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 302

[Close]

BLAST of CsaV3_3G047410 vs. ExPASy TrEMBL
Match: A0A1S3CQT1 (rhomboid-like protein 11, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503716 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.6e-115
Identity = 212/221 (95.93%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFT 60
           MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFT
Sbjct: 1   MQLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFT 60

Query: 61  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSV 120
           ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSV
Sbjct: 61  ATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSV 120

Query: 121 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR-GYSLQ 180
           GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR G+  Q
Sbjct: 121 GASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQ 180

Query: 181 NVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           NVNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 181 NVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 221

[Close]

BLAST of CsaV3_3G047410 vs. ExPASy TrEMBL
Match: A0A5D3E659 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006290 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR-GYSLQN 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR G+  QN
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQN 263

Query: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           VNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 264 VNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 303

[Close]

BLAST of CsaV3_3G047410 vs. ExPASy TrEMBL
Match: A0A1S3CQS6 (rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503716 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR-GYSLQN 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR G+  QN
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQN 263

Query: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           VNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 264 VNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 303

[Close]

BLAST of CsaV3_3G047410 vs. ExPASy TrEMBL
Match: A0A5A7TAW2 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002620 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.4e-113
Identity = 211/221 (95.48%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADH+FQVRNIGALYLYH+RPAWYQFFTA
Sbjct: 84  QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 143

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 144 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 203

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK-VMEAAQASTALSGSFR-GYSLQ 181
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK VMEAAQASTALSGSFR G+  Q
Sbjct: 204 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVVMEAAQASTALSGSFRGGHPSQ 263

Query: 182 NVNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 221
           NVNHVAHLSGALVGVLLVWLLSR+PSQS DQDASALHRKGR
Sbjct: 264 NVNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 304

[Close]

BLAST of CsaV3_3G047410 vs. TAIR 10
Match: AT5G25752.1 (rhomboid-like protein 11 )

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-97
Identity = 173/211 (81.99%), Postives = 188/211 (89.10%), Query Frame = 0


Query: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61
           Q EL K   NRK +KR NGIFWIIL+N+GIY+ADH FQVR I +LYLYH+ PAWYQF TA
Sbjct: 65  QFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQFVTA 124

Query: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNAVSVG
Sbjct: 125 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNAVSVG 184

Query: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGS-FRGYSLQN 181
           ASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+ + GYSLQ 
Sbjct: 185 ASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGYSLQT 244

Query: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQD 212
           VNH+AHLSGALVGV+LVWLLS+ PS S DQD
Sbjct: 245 VNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of CsaV3_3G047410 vs. TAIR 10
Match: AT5G25640.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 78  LYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVK 137
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 138 MSWDWRKILEVLILGQFVIEKVMEA 163
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]

BLAST of CsaV3_3G047410 vs. TAIR 10
Match: AT1G12750.1 (RHOMBOID-like protein 6 )

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 56  YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 115
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 116 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 175
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 176 FRGYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQ 211
                L  V++ AH+ G L G  L ++L   P    ++
Sbjct: 218 -----LPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

[Close]

BLAST of CsaV3_3G047410 vs. TAIR 10
Match: AT1G12750.2 (RHOMBOID-like protein 6 )

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 56  YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 115
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 116 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 175
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 176 FRGYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQ 211
                L  V++ AH+ G L G  L ++L   P    ++
Sbjct: 218 -----LPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

[Close]

BLAST of CsaV3_3G047410 vs. TAIR 10
Match: AT1G12750.3 (RHOMBOID-like protein 6 )

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 56  YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 115
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 116 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 175
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 176 FRGYSLQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQ 211
                L  V++ AH+ G L G  L ++L   P    ++
Sbjct: 218 -----LPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEE 240

The following BLAST results are available for this feature:

BLAST of CsaV3_3G047410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136298.1	1.7e-119	100.00	rhomboid-like protein 11, chloroplastic isoform X2 [Cucumis sativus] >KGN60346.2...	[more]
XP_011652547.1	6.5e-119	100.00	rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_008466246.1	7.4e-115	95.93	PREDICTED: rhomboid-like protein 11, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_008466245.1	2.8e-114	95.91	PREDICTED: rhomboid-like protein 11, chloroplastic isoform X1 [Cucumis melo] >TY...	[more]
KAA0038717.1	7.0e-113	95.48	rhomboid-like protein 11 [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_3G047410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MB5	2.1e-96	81.99	Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11...	[more]
Q8VZ48	9.1e-07	30.38	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
P96617	2.7e-06	27.59	Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=y...	[more]
Q9CAN1	1.0e-05	29.14	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
Q0WQX7	2.9e-05	29.38	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]

BLAST of CsaV3_3G047410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEK4	3.2e-119	100.00	Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889110 PE...	[more]
A0A1S3CQT1	3.6e-115	95.93	rhomboid-like protein 11, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3E659	1.4e-114	95.91	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CQS6	1.4e-114	95.91	rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7TAW2	3.4e-113	95.48	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of CsaV3_3G047410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25752.1	1.5e-97	81.99	rhomboid-like protein 11	[more]
AT5G25640.1	3.1e-26	67.06	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G12750.1	6.5e-08	30.38	RHOMBOID-like protein 6	[more]
AT1G12750.2	6.5e-08	30.38	RHOMBOID-like protein 6	[more]
AT1G12750.3	6.5e-08	30.38	RHOMBOID-like protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 13..209 e-value: 9.8E-35 score: 121.9
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 18..204
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 52..202 e-value: 8.1E-30 score: 103.8
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 3..215
None	No IPR available	PANTHER	PTHR43066:SF5	RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 3..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G047410.1	CsaV3_3G047410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity