CsaV3_3G047130 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G047130
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptiontranscription initiation factor TFIID subunit 7-like
Locationchr3: 38424186 .. 38426025 (-)
RNA-Seq ExpressionCsaV3_3G047130
SyntenyCsaV3_3G047130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAATGCTTTCTCTTTTTATATCATTTTTAAAGTTTAATTTACATTTTAACTCGTTTAAATGTTTATAAACTATATTATTATGAGAAATTATGTGCAATTCATAATTAAAAAAAATTAAAAAAATTGAAATTTTGCTATAAAATAGTGAGTAATAAACTTATGAGTTTAACCATTTATTTTATTTTATTTTTTGTTTGTATTTTGTTTAATTTGTAATTTAGTTAAAGGAAAAAGAAAAAGAAAAGAAAAACAAAAAACAAATTCCAAACTAAATTCTTCCTGAAAACTCTTAAAATATCCCTTTCTCTGTAAAGTTCATCGAGACCCCCCTTATCCTTTACTCTCTCTTTCTCTTTCTCTCTACCAGAAAAGTCAGTGCCAATCACCAAACCGCCGCCGGTTTATGACAACGAACCCTAATCCTTTGGCGTCGCCGGTGGGCTGAACTACAGCGGAGGAAGCTCGGAAGCCCGCCCCATCTCACTAGTGGGACGGAATCCATCTCCACCGCTAACTCATGGAAGTTTTGTTCGGTCCTCCAACCTTTAGCATCGAGGTTCCGCCGTCCTCGGCGTTCTCCGCCGTCTCTCTTCCGTCGGAGAATCCATCCGCTGCCGACACTCAGAACCTAGCTCGGTCGGGTTTTCTCCGCTCTGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGAGTTCCTGACGGTGATTCCGATGACGATGGAGGCGGTGGTGATGAGGTGCAGAGCAAGCCAAAGGAAGGAGGATTGTGCGGATTAGAGTCTCTTGAAAAAGCTCTTCCGATTAAGTGAGTTTCTCTATCCTTGATTCTTAAAATCGAAGGTGAATTTAGCAAATTGAACTTGAAAAATTTTCTATTAACCATCTAATTTCGACGCGAGTTAGCGATTTCCAACTCTTGAATGTAATGAACTTGCAGGAGGGGATTATCGAGCCATTTCTCAGGGAAATCGAAGTCGTTTGCGAATCTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGGCAGAGAATCCTTTCAACAAGAGAAGAAGGATTTTAATGGCGTCGAAATGGTCAAGAAAGAAAGGTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGTTAGCTCTGAACGAAAACAATGAAGAAGAAGAAGAAGAAGAAGAAGATGGTAAAGAATCCGGCGAGGAATCCGATGAAGGTAAAGGAGGAAGAAGACGAAGCCTAGGGCAGAGATTCCATGATGGGAAGCTCGTTAATGGCTTAAAATTCAAAAGCTGTTTTGATCTGCAAGAATATGAACAACAACAATGAAAATGAAAAATCTTTAAGCCTCTTTGTTCTTCACTTTTTAAAGATTTATTTATCTGAACAAAAAGGAAGGCAACAAAAAATATTTATTTTTTTTTCTTTTTTTAATTTTCTTTTTTTATGTTTAATGTGTCCATGTAGATAAATTAATAATATAGGTTCTATATAATTATCTATTTAGATATGTATATGTATTCTATTATATTGGTGTCTCAATGTGTGTATGATTTATGATATGAATGTTTGAGGGAGATGGCAAGTGATGGTGAAATTATGCAAATCTCCTCGGACATGATTCGGGCTAAGAGTAGGATGAGTTATAATCCTTCTTAGTTTCAGGTCATAAATTCAATCTAAGATGATCGTCTATCTAAAATTAATTTTCTATGGGTTTACTATCGTTCAAATTTTGTAAGATAGGGCGTGTTGTCCTATGAGAACACTCACAAGTATATTATTGTTTGGTTTTAGTTGAAGATTAAGATTATATTTTAAAATAATTCAC

mRNA sequence

ATGGAAGTTTTGTTCGGTCCTCCAACCTTTAGCATCGAGGTTCCGCCGTCCTCGGCGTTCTCCGCCGTCTCTCTTCCGTCGGAGAATCCATCCGCTGCCGACACTCAGAACCTAGCTCGGTCGGGTTTTCTCCGCTCTGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGAGTTCCTGACGGTGATTCCGATGACGATGGAGGCGGTGGTGATGAGGTGCAGAGCAAGCCAAAGGAAGGAGGATTGTGCGGATTAGAGTCTCTTGAAAAAGCTCTTCCGATTAAGAGGGGATTATCGAGCCATTTCTCAGGGAAATCGAAGTCGTTTGCGAATCTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGGCAGAGAATCCTTTCAACAAGAGAAGAAGGATTTTAATGGCGTCGAAATGGTCAAGAAAGAAAGGTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGTTAGCTCTGAACGAAAACAATGAAGAAGAAGAAGAAGAAGAAGAAGATGGTAAAGAATCCGGCGAGGAATCCGATGAAGGTAAAGGAGGAAGAAGACGAAGCCTAGGGCAGAGATTCCATGATGGGAAGCTCGTTAATGGCTTAAAATTCAAAAGCTGTTTTGATCTGCAAGAATATGAACAACAACAATGA

Coding sequence (CDS)

ATGGAAGTTTTGTTCGGTCCTCCAACCTTTAGCATCGAGGTTCCGCCGTCCTCGGCGTTCTCCGCCGTCTCTCTTCCGTCGGAGAATCCATCCGCTGCCGACACTCAGAACCTAGCTCGGTCGGGTTTTCTCCGCTCTGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGAGTTCCTGACGGTGATTCCGATGACGATGGAGGCGGTGGTGATGAGGTGCAGAGCAAGCCAAAGGAAGGAGGATTGTGCGGATTAGAGTCTCTTGAAAAAGCTCTTCCGATTAAGAGGGGATTATCGAGCCATTTCTCAGGGAAATCGAAGTCGTTTGCGAATCTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGGCAGAGAATCCTTTCAACAAGAGAAGAAGGATTTTAATGGCGTCGAAATGGTCAAGAAAGAAAGGTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGTTAGCTCTGAACGAAAACAATGAAGAAGAAGAAGAAGAAGAAGAAGATGGTAAAGAATCCGGCGAGGAATCCGATGAAGGTAAAGGAGGAAGAAGACGAAGCCTAGGGCAGAGATTCCATGATGGGAAGCTCGTTAATGGCTTAAAATTCAAAAGCTGTTTTGATCTGCAAGAATATGAACAACAACAATGA

Protein sequence

MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESSSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEEDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ*
Homology
BLAST of CsaV3_3G047130 vs. NCBI nr
Match: XP_004136309.2 (uncharacterized protein LOC101218277 [Cucumis sativus] >KGN60173.1 hypothetical protein Csa_002443 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 4.1e-116
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60
           MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS
Sbjct: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60

Query: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120
           SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS
Sbjct: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120

Query: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE 180
           EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE
Sbjct: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE 180

Query: 181 DGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ 229
           DGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ
Sbjct: 181 DGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ 228

BLAST of CsaV3_3G047130 vs. NCBI nr
Match: XP_008466301.1 (PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101
Identity = 209/231 (90.48%), Postives = 216/231 (93.51%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60
           MEVL GPPTFSIEVPP SAFS VSLPSENPSAA+ QNLARSGFLRSGSGSSIGENSSESS
Sbjct: 1   MEVLLGPPTFSIEVPPPSAFSGVSLPSENPSAAEAQNLARSGFLRSGSGSSIGENSSESS 60

Query: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120
           SSIGVPDGDSDDD GGGDEVQSK KEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS
Sbjct: 61  SSIGVPDGDSDDD-GGGDEVQSKRKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120

Query: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE 180
           EVIQVKDLEK ENPFNKRRRILMASKWSRKK SFYNWPNPKSMPLLALNEN  +E+++EE
Sbjct: 121 EVIQVKDLEKPENPFNKRRRILMASKWSRKKASFYNWPNPKSMPLLALNEN--DEQKQEE 180

Query: 181 DGKESGEES---DEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ 229
           DGK+SGEES   DEGKGGRRR+LGQRFHDGKLVNG KFKSCFDLQE EQQQ
Sbjct: 181 DGKDSGEESDEEDEGKGGRRRNLGQRFHDGKLVNGFKFKSCFDLQECEQQQ 228

BLAST of CsaV3_3G047130 vs. NCBI nr
Match: XP_038898503.1 (uncharacterized protein LOC120086121 [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 5.4e-84
Identity = 185/233 (79.40%), Postives = 195/233 (83.69%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60
           MEVLFG PTFSIEVPP +AF+ VS+P ENPS  +TQN ARSGF  SGSGSSIGENSS SS
Sbjct: 1   MEVLFG-PTFSIEVPPPTAFAGVSIPLENPSPPETQNRARSGFRESGSGSSIGENSSASS 60

Query: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120
           SSIG+PD DSDDD G  DEVQSKP EGGLCGLESLE+ALPIKRGLSSHFSGKSKSFANLS
Sbjct: 61  SSIGIPDADSDDD-GDTDEVQSKPMEGGLCGLESLEEALPIKRGLSSHFSGKSKSFANLS 120

Query: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEE------ 180
           EVIQVKDLEK ENPFNKRRRILMASKWSR K SFYNWPNPKSMPLLALNE+ EE      
Sbjct: 121 EVIQVKDLEKPENPFNKRRRILMASKWSR-KASFYNWPNPKSMPLLALNEDEEEDRKEAS 180

Query: 181 EEEEEEDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQ 228
           EE + EDG    +E DE K  RRR+LGQRFHD KLVNG K KSCFDLQEYEQQ
Sbjct: 181 EESDSEDGDGESDEEDEEKERRRRTLGQRFHDRKLVNGFKSKSCFDLQEYEQQ 230

BLAST of CsaV3_3G047130 vs. NCBI nr
Match: XP_022137206.1 (transcription initiation factor TFIID subunit 7-like [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75
Identity = 173/239 (72.38%), Postives = 191/239 (79.92%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAA-----DTQNLARSGF--LRSGSGSSIG 60
           MEVLF  PTFSIEVPPS+AF  VS+  ENP+ A      TQ+    G     SGSGSS+G
Sbjct: 1   MEVLFSAPTFSIEVPPSTAFVGVSIAPENPAVAASCLPQTQSRVVPGLSGSGSGSGSSLG 60

Query: 61  ENSSESSSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKS 120
           E SSESSSSIGVPD DS+DD GGG+EVQSKPKEGGLCGL+SLE ALPIKRGLSSHFSGKS
Sbjct: 61  EVSSESSSSIGVPDDDSEDD-GGGEEVQSKPKEGGLCGLDSLEDALPIKRGLSSHFSGKS 120

Query: 121 KSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNE 180
           KSFANLSEVIQVKDLEK ENPFNKRRRILMASKWSR KGSFYNWPNPKSMPLLALNE+ E
Sbjct: 121 KSFANLSEVIQVKDLEKPENPFNKRRRILMASKWSR-KGSFYNWPNPKSMPLLALNEDEE 180

Query: 181 EEEEEEED-----GKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQ 228
           + EEEE++       E G+E DE    RRR+L  +FHD KLVNG+K KSCFDLQEY+ +
Sbjct: 181 QGEEEEQEEADCSDSEDGDEEDEENERRRRTLASKFHDRKLVNGIKSKSCFDLQEYQHR 237

BLAST of CsaV3_3G047130 vs. NCBI nr
Match: XP_022937406.1 (uncharacterized protein LOC111443706 [Cucurbita moschata] >XP_023535797.1 uncharacterized protein LOC111797124 [Cucurbita pepo subsp. pepo] >KAG6591629.1 hypothetical protein SDJN03_13975, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.3 bits (726), Expect = 9.5e-73
Identity = 167/233 (71.67%), Postives = 184/233 (78.97%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSA-ADTQNLARSGFLRSGSGSSIGENSSES 60
           MEV+FGPPTF+IEV  ++AF  VSL  ENP+A  +TQN  R+ F  SGSGSSIGENSS S
Sbjct: 1   MEVMFGPPTFNIEVAAATAFDGVSLTPENPAAVVETQNRGRTSFRGSGSGSSIGENSSGS 60

Query: 61  SSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANL 120
           SSSIGVPDGDSDDDGG G EVQSK KEGGLC L+SLE ALPIKRGLSSHFSGKSKSFANL
Sbjct: 61  SSSIGVPDGDSDDDGGSG-EVQSKSKEGGLCRLDSLEDALPIKRGLSSHFSGKSKSFANL 120

Query: 121 SEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEE----- 180
           SEVIQVKDLEK ENPFNKR+RILMASKWSR K SFYNWPNPKSMPLLAL+E+ EE     
Sbjct: 121 SEVIQVKDLEKPENPFNKRKRILMASKWSR-KASFYNWPNPKSMPLLALDEDEEEKYHKE 180

Query: 181 -----EEEEEEDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQ 223
                + E+ + G +  +E DE    R R+LG RFHD KLVNG K KSCFDLQ
Sbjct: 181 AAAGSDSEDRDRGSDEEDEEDEENERRGRTLGHRFHDRKLVNGFKSKSCFDLQ 231

BLAST of CsaV3_3G047130 vs. ExPASy TrEMBL
Match: A0A0A0LEH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881860 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.0e-116
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60
           MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS
Sbjct: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60

Query: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120
           SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS
Sbjct: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120

Query: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE 180
           EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE
Sbjct: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE 180

Query: 181 DGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ 229
           DGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ
Sbjct: 181 DGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ 228

BLAST of CsaV3_3G047130 vs. ExPASy TrEMBL
Match: A0A1S3CQX1 (uncharacterized protein LOC103503753 OS=Cucumis melo OX=3656 GN=LOC103503753 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 209/231 (90.48%), Postives = 216/231 (93.51%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESS 60
           MEVL GPPTFSIEVPP SAFS VSLPSENPSAA+ QNLARSGFLRSGSGSSIGENSSESS
Sbjct: 1   MEVLLGPPTFSIEVPPPSAFSGVSLPSENPSAAEAQNLARSGFLRSGSGSSIGENSSESS 60

Query: 61  SSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120
           SSIGVPDGDSDDD GGGDEVQSK KEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS
Sbjct: 61  SSIGVPDGDSDDD-GGGDEVQSKRKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLS 120

Query: 121 EVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEEE 180
           EVIQVKDLEK ENPFNKRRRILMASKWSRKK SFYNWPNPKSMPLLALNEN  +E+++EE
Sbjct: 121 EVIQVKDLEKPENPFNKRRRILMASKWSRKKASFYNWPNPKSMPLLALNEN--DEQKQEE 180

Query: 181 DGKESGEES---DEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQQ 229
           DGK+SGEES   DEGKGGRRR+LGQRFHDGKLVNG KFKSCFDLQE EQQQ
Sbjct: 181 DGKDSGEESDEEDEGKGGRRRNLGQRFHDGKLVNGFKFKSCFDLQECEQQQ 228

BLAST of CsaV3_3G047130 vs. ExPASy TrEMBL
Match: A0A6J1C5V2 (transcription initiation factor TFIID subunit 7-like OS=Momordica charantia OX=3673 GN=LOC111008707 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.9e-76
Identity = 173/239 (72.38%), Postives = 191/239 (79.92%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAA-----DTQNLARSGF--LRSGSGSSIG 60
           MEVLF  PTFSIEVPPS+AF  VS+  ENP+ A      TQ+    G     SGSGSS+G
Sbjct: 1   MEVLFSAPTFSIEVPPSTAFVGVSIAPENPAVAASCLPQTQSRVVPGLSGSGSGSGSSLG 60

Query: 61  ENSSESSSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKS 120
           E SSESSSSIGVPD DS+DD GGG+EVQSKPKEGGLCGL+SLE ALPIKRGLSSHFSGKS
Sbjct: 61  EVSSESSSSIGVPDDDSEDD-GGGEEVQSKPKEGGLCGLDSLEDALPIKRGLSSHFSGKS 120

Query: 121 KSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNE 180
           KSFANLSEVIQVKDLEK ENPFNKRRRILMASKWSR KGSFYNWPNPKSMPLLALNE+ E
Sbjct: 121 KSFANLSEVIQVKDLEKPENPFNKRRRILMASKWSR-KGSFYNWPNPKSMPLLALNEDEE 180

Query: 181 EEEEEEED-----GKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYEQQ 228
           + EEEE++       E G+E DE    RRR+L  +FHD KLVNG+K KSCFDLQEY+ +
Sbjct: 181 QGEEEEQEEADCSDSEDGDEEDEENERRRRTLASKFHDRKLVNGIKSKSCFDLQEYQHR 237

BLAST of CsaV3_3G047130 vs. ExPASy TrEMBL
Match: A0A6J1FA94 (uncharacterized protein LOC111443706 OS=Cucurbita moschata OX=3662 GN=LOC111443706 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.6e-73
Identity = 167/233 (71.67%), Postives = 184/233 (78.97%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSA-ADTQNLARSGFLRSGSGSSIGENSSES 60
           MEV+FGPPTF+IEV  ++AF  VSL  ENP+A  +TQN  R+ F  SGSGSSIGENSS S
Sbjct: 1   MEVMFGPPTFNIEVAAATAFDGVSLTPENPAAVVETQNRGRTSFRGSGSGSSIGENSSGS 60

Query: 61  SSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANL 120
           SSSIGVPDGDSDDDGG G EVQSK KEGGLC L+SLE ALPIKRGLSSHFSGKSKSFANL
Sbjct: 61  SSSIGVPDGDSDDDGGSG-EVQSKSKEGGLCRLDSLEDALPIKRGLSSHFSGKSKSFANL 120

Query: 121 SEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEE----- 180
           SEVIQVKDLEK ENPFNKR+RILMASKWSR K SFYNWPNPKSMPLLAL+E+ EE     
Sbjct: 121 SEVIQVKDLEKPENPFNKRKRILMASKWSR-KASFYNWPNPKSMPLLALDEDEEEKYHKE 180

Query: 181 -----EEEEEEDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQ 223
                + E+ + G +  +E DE    R R+LG RFHD KLVNG K KSCFDLQ
Sbjct: 181 AAAGSDSEDRDRGSDEEDEEDEENERRGRTLGHRFHDRKLVNGFKSKSCFDLQ 231

BLAST of CsaV3_3G047130 vs. ExPASy TrEMBL
Match: A0A6J1ILJ2 (uncharacterized protein LOC111476326 OS=Cucurbita maxima OX=3661 GN=LOC111476326 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.0e-72
Identity = 167/236 (70.76%), Postives = 185/236 (78.39%), Query Frame = 0

Query: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSA-ADTQNLARSGFLRSGSGSSIGENSSES 60
           MEV+FGPPTF++EV  ++AF  VSL  ENP+A  +TQN  R+GF  SGS SSIGENSS S
Sbjct: 1   MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSDSSIGENSSGS 60

Query: 61  SSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANL 120
           SSSIGVPDGDSDDDGG G EVQSK KEGGLC L+SLE ALPIKRGLSSHFSGKSKSFANL
Sbjct: 61  SSSIGVPDGDSDDDGGSG-EVQSKSKEGGLCRLDSLEDALPIKRGLSSHFSGKSKSFANL 120

Query: 121 SEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNEEEEEEE 180
           SEVIQVKDLEK ENPFNKR+RILMASKWSR K SFYNWPNPKSMPLLAL+E+ EE+  +E
Sbjct: 121 SEVIQVKDLEKPENPFNKRKRILMASKWSR-KASFYNWPNPKSMPLLALDEDEEEKYHKE 180

Query: 181 -------------EDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQ 223
                         D ++  +E DE    RRR+LG RFHD KLVNG K KSCFDLQ
Sbjct: 181 AAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHDQKLVNGFKSKSCFDLQ 234

BLAST of CsaV3_3G047130 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 96/240 (40.00%), Postives = 137/240 (57.08%), Query Frame = 0

Query: 4   LFGPPTFSIEVPPSSAFSAVSLP-----SENPSAADTQN---LARSGFLRSGSGSSIGEN 63
           L   PTFSIEV   S +    LP     S + S+ +T N   +  SG  R  SG +   +
Sbjct: 3   LMAKPTFSIEV---SQYGTTDLPATEKASSSSSSFETTNEEGVEESGLSRIWSGQT--AD 62

Query: 64  SSESSSSIGVPDGDSDDD----GGGGDEVQSKPKE-GGLCGLESLEKALPIKRGLSSHFS 123
            S  SSSIG P GDS++D        D+V SK     GL  + SLE +LP KRGLS+H+ 
Sbjct: 63  YSSDSSSIGTP-GDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNHYK 122

Query: 124 GKSKSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNE 183
           GKSKSF NL E+  VK++ K ENP NKRRR+ + +K +RK  SFY+W NPKSMPLL +NE
Sbjct: 123 GKSKSFGNLGEIGSVKEVAKQENPLNKRRRLQICNKLARK--SFYSWQNPKSMPLLPVNE 182

Query: 184 N-NEEEEEEEEDGKESGEESDEGKGGRRRSLGQRFHDGKLVN-GLKFKSCFDLQEYEQQQ 229
           + ++++E+++E+  +SG + ++               G   N   K +SCF L +  +++
Sbjct: 183 DEDDDDEDDDEEDLKSGFDENKSSSDEEGVKKVVVRKGSFKNRAYKSRSCFALSDLIEEE 234

BLAST of CsaV3_3G047130 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 0

Query: 42  GFLRSGSGSSIGENSSESSSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGL-ESLEKALP 101
           G   S + +   E SS+SSSSIG    +++++    D V    + G L     SLE +LP
Sbjct: 50  GLRMSNNNNKSPEESSDSSSSIG-ESSENEEEEEEDDAVSC--QRGTLDSFSSSLEDSLP 109

Query: 102 IKRGLSSHFSGKSKSFANLSEVI-QVKDLEKAENPFNKRRRILMASKWSRK-----KGSF 161
           IKRGLS+H+ GKSKSF NL E   + KDLEK ENPFNKRRR+++A+K  R+       +F
Sbjct: 110 IKRGLSNHYVGKSKSFGNLMEAASKAKDLEKVENPFNKRRRLVIANKLRRRGRSMSASNF 169

Query: 162 YNWPNPKSMPLLALNENNEEEEEEEEDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLK 221
           Y+W NP SMPLLAL E NEE+     D      E D+G G   R +     + K +   +
Sbjct: 170 YSWQNPNSMPLLALQEPNEEDHHIHND----DYEDDDGDGDDHRKIMMMMKNKKELMA-Q 229

Query: 222 FKSCFDLQEYEQQ 228
            +SCF L   +++
Sbjct: 230 TRSCFCLSSLQEE 234

BLAST of CsaV3_3G047130 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 79/219 (36.07%), Postives = 108/219 (49.32%), Query Frame = 0

Query: 12  IEVPPSSAFSAVSLPSENPSAADTQNLARSGFLRSGSGSSIGENSSESSSSIGVPDGDSD 71
           +EV   S F   S  + +  A      +R G  R G          ESSSS+G    + +
Sbjct: 1   MEVLVGSTFRDRSSVTTHDQAVPASLSSRIGLRRCGRSP-----PPESSSSVGETSENEE 60

Query: 72  DDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSKSFANLSEVIQVKDLEKA 131
           D+    D V S           SLE +LPIKRGLS+H+ GKSKSF NL E     DL K 
Sbjct: 61  DE---DDAVSSSQGRWLNSFSSSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTNDLVKV 120

Query: 132 ENPFNKRRRILMASKWSRKKG----SFYNWPNPKSMPLLALNE-NNEEEEEEEEDGKESG 191
           E+P NKRRR+L+A+K  R+      S Y   NP SMPLLAL E +NE+ +  ++D  +  
Sbjct: 121 ESPLNKRRRLLIANKLRRRSSLSSFSIYTKINPNSMPLLALQESDNEDHKLNDDDDDDDS 180

Query: 192 EESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFDLQEYE 226
              DE    + + +    H   +V   + KSCF L  ++
Sbjct: 181 SSDDETSKLKEKRMKMTNHRDFMVP--QTKSCFSLTSFQ 209

BLAST of CsaV3_3G047130 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 7.7e-12
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 55  NSSESSSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIKRGLSSHFSGKSK 114
           +SS SS SIG    +SDDD GG +E++S    G L  +ESLE+ALPIKR +S  + GKSK
Sbjct: 22  SSSTSSDSIG---ENSDDDEGGENEIESS-YNGPLDMMESLEEALPIKRAISKFYKGKSK 81

Query: 115 SFANLSEV--IQVKDLEKAENPFNKRRRILMASKWSRKKG 153
           SF +LSE   + VKDL K EN +++RRR L++ +   + G
Sbjct: 82  SFMSLSETSSLPVKDLTKPENLYSRRRRNLLSHRICSRGG 117

BLAST of CsaV3_3G047130 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-10
Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = 0

Query: 27  SENPSAADTQNLARSGFLRSGSGSSIGENSSESSSSIGVPDGDSDDDGGGGDEVQSKPKE 86
           S +PS +D+     S    S + SSIG NS +   S      +   D  G +EV+S P +
Sbjct: 24  SPSPSPSDS-----SSSPSSSASSSIGRNSDDGEKS-----SEDGGDDAGENEVES-PYK 83

Query: 87  GGLCGLESLEKALPIKRGLSSHFSGKSKSFAN--------LSEVIQVKDLEKAENPFNKR 146
           G L  +ESLE+ LP+++G+S ++SGKSKSF N        L+    +KDL K ENP+++R
Sbjct: 84  GPLEMMESLEQVLPVRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRR 143

Query: 147 RRILMASK-WSRKK 152
           RR L+  + W   K
Sbjct: 144 RRNLLCHQIWENNK 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004136309.24.1e-116100.00uncharacterized protein LOC101218277 [Cucumis sativus] >KGN60173.1 hypothetical ... [more]
XP_008466301.12.8e-10190.48PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo][more]
XP_038898503.15.4e-8479.40uncharacterized protein LOC120086121 [Benincasa hispida][more]
XP_022137206.12.1e-7572.38transcription initiation factor TFIID subunit 7-like [Momordica charantia][more]
XP_022937406.19.5e-7371.67uncharacterized protein LOC111443706 [Cucurbita moschata] >XP_023535797.1 unchar... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LEH92.0e-116100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881860 PE=4 SV=1[more]
A0A1S3CQX11.4e-10190.48uncharacterized protein LOC103503753 OS=Cucumis melo OX=3656 GN=LOC103503753 PE=... [more]
A0A6J1C5V29.9e-7672.38transcription initiation factor TFIID subunit 7-like OS=Momordica charantia OX=3... [more]
A0A6J1FA944.6e-7371.67uncharacterized protein LOC111443706 OS=Cucurbita moschata OX=3662 GN=LOC1114437... [more]
A0A6J1ILJ21.0e-7270.76uncharacterized protein LOC111476326 OS=Cucurbita maxima OX=3661 GN=LOC111476326... [more]
Match NameE-valueIdentityDescription
AT5G24890.12.7e-2540.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G24550.11.5e-2041.45unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G31510.12.3e-1636.07unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G43850.17.7e-1249.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G21940.14.2e-1038.06unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..66
NoneNo IPR availablePANTHERPTHR33172:SF46OS08G0516900 PROTEINcoord: 47..227
NoneNo IPR availablePANTHERPTHR33172OS08G0516900 PROTEINcoord: 47..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G047130.1CsaV3_3G047130.1mRNA