CsaV3_3G046350 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G046350
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ubiquitin-like domain-containing protein
Location	chr3: 37850017 .. 37852598 (-)
RNA-Seq Expression	CsaV3_3G046350
Synteny	CsaV3_3G046350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCGACGGCGTTTGTGCACTTGACGTTGTTGACTTTCCTCCCCTCCAGTCAACGACGACGCCCGAGAAACATCGTCGATCCTTCTCCTTGCTTTCATCTCCTTTGATGATTGTTGGCCTCTCCAGGAAGAATGTTTTGTACCGCCAGCTTCCTCATCAGCCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTCTTTCGGTAATTTCTGTTTCTGTGCGTGGCTGTGTTTTTTTTTATTTTAATCCACATAATTCGATTCGGGGTAATTTTTGGTAGTTTTTTTATGATGCTGGAGAAATGGAGATTATTCCCTGCTCGTGAGTTTTGTTTGGTTTTATTTAGAGCAGAGATATATTGACGGTTTTTGAAATGGGTTTTTATTTGATCCCAGAAAGTGAGAAAACTGATTTCTTAAATTTGAAGAATAAGAATGTCTTTGTTTGCAACCTCTTTTAATATAGGAGGACTTCAATGAATTGAGATGTTTGACACAGATATTCAAGTTAGGAGATCTGCTACTGTTGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGCACGGACCGGGAAAGATTTCATGGTTGGTACATTTTATTATTTTACCATTTCATTTTAAGAATGAGATTGATTACTCTTATCTGCTGTTAGATCCTATTCTGATTTTGTTTATTTATCAATGCTGGGCCAAAACTATGGACCATATTTTGATGATATGCTGAAAGCTTGAAGGACATGCTTAATAGAATAGAACTACTTATCTGCTCTAAATTATCAACTTTCCTGGACTTTGTCTACCTTATTCCTCTAACTTAACTAGAAAACTTTAATCTGGATATCTTTTCCCTTTGTCACAAAAGTTTATAGAAGAGTGTTTTTCAATTGAAATGTTTCCTGTTCTTGGTTTGATTCATGCAGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTAGTTGACGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGGTACGTAGTTTGTTGTATATAGTAGTAGCTTATGTTGTCTTTGTGACAGTTCAAGTTTCTTTAAATGATTAACTGCTTTGTTGCTAGCTTAGACTTGATTCTTGATGCATTATTTGTGAATCTAGTTACTGTCAGGAATGTGTTTAATTCCAGGATGTTAATGAAATATGAAAAGGAAGAGTATAGAATCACACAACTTTAAGCTTATGCTAATTGGATTTCCCTGTTTTAAAATGTTCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAAGAAACTTGTGGTTTCCTCAAAACTGATCAGTAGGTAAGTCTCTTACCTCTTAAATAGTGGCCCTTGATGGGAAAAACTGTATTGACTCAAAAATAGTCAGGGACTTGAGCATTAAAAAGAATTTCAAAAGCTTGAGAGAATAAAAAATGCGCATCCTGAAAGTGGTAAAAGATACTGTTAGGAACTTTGGGTATTGTGTTGATCTAAGAAATCTTAAATAATATAAGATTTTTATAGAAGTTTTCTTGTTATTCAATAAGTCTCTTGAAAGACAATTTGGGCTATTAGATTTTACCACTTGTCCAAGATAAATTAGTGACTATTAGATCTTTAACATCATCCAATGTCAATTTGTAAATATTAGATCCTCCACGTTTTTTAAGGTGAATTTCGAGTCATTGGATTTGTTTGATGGCTAAGTTTGTTTGTGCTATAAATAGGTGGACACATATAGTTGCTAAATCATCCCAAAATATCTAGTTGCTTGTAAGGTTTTCCCTTGTTTCGTTCATTCAATGAACATTTTCTTCTCTAAAAAAGCCATCCCAAAATCCCAAATCAAGTATGTTATTCCTTTATAAGAAATAAAGGTTGTAACTCCTATTTTGTACCGTCCAATTCATCTATTTTTCATGTAATTTTTATCCTAATTTGTTTAGGAGTTATCACTTAAAATCATTGTATTCTCTCCATTTTTCTTCATTGTTATTCTTAACCTATTTTAGTTGCGATCTTACTCTATTTCGTCACCATTCTTTTCACAGCAAGAAATCATATAAGATAGATACCCCTTACTTTAATAATTTATTAATCTAATCAATATACTTTTTTTACATTGCTATCATCTCACCAATCCCTTATTTTGAATTTCCAATATGTTCTGTTTACTATAGAATTCTAACTTCTCAGGATATCATCTCGATCAAAAAGCTTCAAGCAAAATGATCAGAAAGATATGGAAAGATACAACTACAACGACATAGAAAGTGGAAGGTGTCAACATAGTGGCAGCAACAACAACGATCTCTTCATGAACCATGAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCCGCAGGAAAGATGAGCATCAAGAGTCTGGTACGTCCATCGGTAACTCGCCCTAGCCTGGTGCGTGGTTTCAAGAATTTAATACAATTATGCCGCGAAAAACGACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTTTGA

mRNA sequence

ATGGCTGTCGACGGCGTTTGTGCACTTGACGTTGTTGACTTTCCTCCCCTCCAGTCAACGACGACGCCCGAGAAACATCGTCGATCCTTCTCCTTGCTTTCATCTCCTTTGATGATTGTTGGCCTCTCCAGGAAGAATGTTTTGTACCGCCAGCTTCCTCATCAGCCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTCTTTCGATATTCAAGTTAGGAGATCTGCTACTGTTGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGCACGGACCGGGAAAGATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTAGTTGACGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAAGAAACTTGTGGTTTCCTCAAAACTGATCAGTAGGATATCATCTCGATCAAAAAGCTTCAAGCAAAATGATCAGAAAGATATGGAAAGATACAACTACAACGACATAGAAAGTGGAAGGTGTCAACATAGTGGCAGCAACAACAACGATCTCTTCATGAACCATGAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCCGCAGGAAAGATGAGCATCAAGAGTCTGGTACGTCCATCGGTAACTCGCCCTAGCCTGGTGCGTGGTTTCAAGAATTTAATACAATTATGCCGCGAAAAACGACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTTTGA

Coding sequence (CDS)

ATGGCTGTCGACGGCGTTTGTGCACTTGACGTTGTTGACTTTCCTCCCCTCCAGTCAACGACGACGCCCGAGAAACATCGTCGATCCTTCTCCTTGCTTTCATCTCCTTTGATGATTGTTGGCCTCTCCAGGAAGAATGTTTTGTACCGCCAGCTTCCTCATCAGCCTCTCATGCTCTCTGTTCTTAAATTGGACGGCTCTTCTTTCGATATTCAAGTTAGGAGATCTGCTACTGTTGCTGAATTGAAGGGGGCCGTGGAGTTGGTCTTCAGTCACATGCCACAGCACGGACCGGGAAAGATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTATGCTATGCTGGTCAAAAGTTAGTTGACGATGCTGACTACATTGCAAGTTTTGGCATTAAGGATGGTGATCAGCTTCAATTTGTCCGGCATGTCACAACTGGCTACAATGTTATAAGAAAGCAATCAAAGAAACTTGTGGTTTCCTCAAAACTGATCAGTAGGATATCATCTCGATCAAAAAGCTTCAAGCAAAATGATCAGAAAGATATGGAAAGATACAACTACAACGACATAGAAAGTGGAAGGTGTCAACATAGTGGCAGCAACAACAACGATCTCTTCATGAACCATGAGCCAAAGATGGTAGTGTTTTTAGGAGGATGGTTCTCTCACACCAAGCTAGCATCCGCAGGAAAGATGAGCATCAAGAGTCTGGTACGTCCATCGGTAACTCGCCCTAGCCTGGTGCGTGGTTTCAAGAATTTAATACAATTATGCCGCGAAAAACGACATTATGAAAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTTTGA

Protein sequence

MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV*

Homology

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BLAST of CsaV3_3G046350 vs. NCBI nr
Match: XP_004136480.1 (uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical protein Csa_001701 [Cucumis sativus])

HSP 1 Score: 557.0 bits (1434), Expect = 9.3e-155
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240
           DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP
Sbjct: 181 DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

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BLAST of CsaV3_3G046350 vs. NCBI nr
Match: KAA0038816.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 505.4 bits (1300), Expect = 3.2e-139
Identity = 259/279 (92.83%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  NNDLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYNYKYNDIESGRCQHNG--NNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

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BLAST of CsaV3_3G046350 vs. NCBI nr
Match: XP_008466420.1 (PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138
Identity = 258/279 (92.47%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  N+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYNYKYNDIESGRCQHNG--NDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

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BLAST of CsaV3_3G046350 vs. NCBI nr
Match: XP_038899214.1 (uncharacterized protein LOC120086568 [Benincasa hispida])

HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-134
Identity = 247/279 (88.53%), Postives = 258/279 (92.47%), Query Frame = 0


Query: 1   MAVDGVCALDVVDF--PPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60
           MA+DGVC LDVV+F  PP    TT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM
Sbjct: 1   MAIDGVCTLDVVEFPPPPPPPPTTVEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLM 60

Query: 61  LSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQK 120
           LSVLKLDGS FDIQV+RSATVAELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCYAGQK
Sbjct: 61  LSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWHFCLCYAGQK 120

Query: 121 LVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQND 180
           LVDDADYIA+FGIKDGDQLQFVRHVTTGYN IRKQSKK VVSSKL+SRIS RSK+++QND
Sbjct: 121 LVDDADYIANFGIKDGDQLQFVRHVTTGYNAIRKQSKKCVVSSKLLSRISYRSKNYEQND 180

Query: 181 QKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           Q+DMERYNYNDIESGR QH G  NN+LFMNHEPKMVVFLGGWFSHTKLASAGK  I SLV
Sbjct: 181 QEDMERYNYNDIESGRFQHHG--NNELFMNHEPKMVVFLGGWFSHTKLASAGKTRINSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPS TRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of CsaV3_3G046350 vs. NCBI nr
Match: XP_022134606.1 (uncharacterized protein LOC111006831 [Momordica charantia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.3e-116
Identity = 225/279 (80.65%), Postives = 243/279 (87.10%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFP-PLQSTTTPEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60
           MAVDGVC LD+ DFP P ++ ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60

Query: 61  LSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQK 120
           LSVLKLDGS FDIQV++SATVAELKGAVE VFSHMPQ GPGKISWLHVWWHFCLCYAG+K
Sbjct: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120

Query: 121 LVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQND 180
           LVDD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS + VVSSKL SR SSRSKS K+ND
Sbjct: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180

Query: 181 QKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           Q      NYNDIE GR QH   NN +LFM+ EPKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QD-----NYNDIEMGRFQH--HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPS +RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 272

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BLAST of CsaV3_3G046350 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 57  LMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPG--KISWLHVWWHFCLCY 116
           + LSV+KLDGSS D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 117 AGQKLVDDADYIASFGIKDGDQLQFVRHV 144
             +KL+DD   +   GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.0e-07
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 55  QPLMLSVLKLDGSSFDIQVRRSATVAELKGAVE--LVFSHMPQHGPGKISWLHVWWHFCL 114
           Q + + V K+DG    + V +SATV +LK A++  +      + G   ISW +VW  + L
Sbjct: 39  QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHL 98

Query: 115 CYAGQKLVDDADYIASFGIKDGDQLQFVR 142
             AG+KL +D   +  +GI++ D++ F++
Sbjct: 99  TSAGEKLTEDRKKLRDYGIRNRDEVSFIK 127

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.2e-07
Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 55  QPLMLSVLKLDGSSFDIQVRRSATVAELKGAVE--LVFSHMPQHGPGKISWLHVWWHFCL 114
           Q + + V K+DG    + V ++ATV +LK A++  +      + G   ISW +VW  + L
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHL 89

Query: 115 CYAGQKLVDDADYIASFGIKDGDQLQFVR 142
             AG+KL +D   +  +GI++ D++ F++
Sbjct: 90  TSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.8e-07
Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 55  QPLMLSVLKLDGSSFDIQVRRSATVAELKGAVE--LVFSHMPQHGPGKISWLHVWWHFCL 114
           Q + + V K+DG    + V ++ATV +LK A++  +      + G   ISW +VW  + L
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHL 89

Query: 115 CYAGQKLVDDADYIASFGIKDGDQLQFVR 142
             AG+KL +D   +  +GI++ D++ F++
Sbjct: 90  TSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy TrEMBL
Match: A0A0A0LH97 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877630 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 4.5e-155
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV
Sbjct: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240
           DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP
Sbjct: 181 DMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVRP 240

Query: 241 SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 SVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy TrEMBL
Match: A0A5A7T9I3 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003750 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.5e-139
Identity = 259/279 (92.83%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  NNDLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYNYKYNDIESGRCQHNG--NNDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy TrEMBL
Match: A0A5D3E6G8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007520 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.9e-139
Identity = 258/279 (92.47%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  N+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYNYKYNDIESGRCQHNG--NDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy TrEMBL
Match: A0A1S3CR65 (uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.9e-139
Identity = 258/279 (92.47%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60
           MAVDGVC LDVVDFPP  STTT EKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLS 60

Query: 61  VLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLV 120
           VLKLDGS FDIQVRRSATVAELKGAVELVFSHMPQ+GPGKISWLHVWWHFCLCY GQKL+
Sbjct: 61  VLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKLI 120

Query: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQK 180
           DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKLISRISSRSKSFKQNDQK
Sbjct: 121 DDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQK 180

Query: 181 DMERYN--YNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           DMERYN  YNDIESGRCQH+G  N+DLF+N +PKMVVFLGGWFSHTKLASAGKMSIKSLV
Sbjct: 181 DMERYNYKYNDIESGRCQHNG--NDDLFVN-QPKMVVFLGGWFSHTKLASAGKMSIKSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPSVTRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Sbjct: 241 RPSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of CsaV3_3G046350 vs. ExPASy TrEMBL
Match: A0A6J1BY98 (uncharacterized protein LOC111006831 OS=Momordica charantia OX=3673 GN=LOC111006831 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.3e-117
Identity = 225/279 (80.65%), Postives = 243/279 (87.10%), Query Frame = 0


Query: 1   MAVDGVCALDVVDFP-PLQSTTTPEKHRRSFSLL-SSPLMIVGLSRKNVLYRQLPHQPLM 60
           MAVDGVC LD+ DFP P ++ ++  K RRSFSLL SSPLMIVGLSRKNV YRQLPHQPL 
Sbjct: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGLSRKNVSYRQLPHQPLH 60

Query: 61  LSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQK 120
           LSVLKLDGS FDIQV++SATVAELKGAVE VFSHMPQ GPGKISWLHVWWHFCLCYAG+K
Sbjct: 61  LSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGEK 120

Query: 121 LVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQND 180
           LVDD DYIA+FGIKDGDQLQFVRHVTTGYNVIRKQS + VVSSKL SR SSRSKS K+ND
Sbjct: 121 LVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRND 180

Query: 181 QKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLV 240
           Q      NYNDIE GR QH   NN +LFM+ EPKMVVFLGGWFSHTKLASAG+MSI SLV
Sbjct: 181 QD-----NYNDIEMGRFQH--HNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLV 240

Query: 241 RPSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 278
           RPS +RPSLVRGFKNL+QLCREKRHY+KV+KKKRSII V
Sbjct: 241 RPSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 272

[Close]

BLAST of CsaV3_3G046350 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-34
Identity = 76/161 (47.20%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 27  RRSFSLLSSPLMIV-GLSRKNVL-YRQLPHQPLMLSVLKLDGSSFDIQVRRSATVAELKG 86
           RRS +   SPL ++ GL R+    Y Q+P +P+ L+VLKLDGSSF IQV ++ATV ELK 
Sbjct: 6   RRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQVLKTATVGELKM 65

Query: 87  AVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVT 146
           AVE  FSH+P  GPGKISW HVW  FCL Y  ++L+++++Y+  FGIKDGDQL+F+RH++
Sbjct: 66  AVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHIS 125

Query: 147 TGYNVIRKQSKKL--VVSSKLISRISSRSKSFKQNDQKDME 184
               ++ K   K   V S K +   S+  ++ K+N  +++E
Sbjct: 126 NYCMLMVKHKSKTPRVSSFKQLKLFSTTPETRKKNVIREVE 166

[Close]

BLAST of CsaV3_3G046350 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 8.1e-32
Identity = 71/159 (44.65%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 44  RKNVLYRQLPHQPLMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISW 103
           R+   Y +LP++P+ LSVLKLDGSSFD+ V  SATV +LK A+E  FSH+P+ GP KISW
Sbjct: 6   RRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISW 65

Query: 104 LHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHV------TTGYNVIRKQSKKL 163
            HVW HFCLC+ GQKL+ D D I ++G+KDGD+++F  HV      + GY+   KQ    
Sbjct: 66  SHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSKGYSRKSKQKNLE 125

Query: 164 VVSSK----LISRISSRSKSFKQNDQKDMERYNYNDIES 193
            V  K    +++RI     S+   ++  +  Y  +D+E+
Sbjct: 126 RVLPKDGDEVLNRIEEIDDSWDDLERGGLVMYKDDDMET 164

[Close]

BLAST of CsaV3_3G046350 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-28
Identity = 63/134 (47.01%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 52  LPHQPLMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFC 111
           +P +P+ L+VLKLDGSSF   V ++ATV ELK AVE  FSH+P  GPGKISW HVW  FC
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 60

Query: 112 LCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKL--VVSSKLISRISS 171
           L Y  ++L+++++Y+  FGIKDGDQL+F+RH++    ++ K   K   V S K +   S+
Sbjct: 61  LSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVSSFKQLKLFST 120

Query: 172 RSKSFKQNDQKDME 184
             ++ K+N  +++E
Sbjct: 121 TPETRKKNVIREVE 131

[Close]

BLAST of CsaV3_3G046350 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 5.6e-25
Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = 0


Query: 42  LSRKNVLYRQLPHQ-PLMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGK 101
           +S +   Y +LP Q  + LSV+KL+GS FD++V +  +VAELK AVE VF+  P  G G 
Sbjct: 37  ISGRRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGM 96

Query: 102 ISWLHVWWHFCLCYAGQKLVDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVS 161
           ISW HVW HFCLCY  Q+LV+D   I   G+ DGDQL FVRH++  ++ + K+SK     
Sbjct: 97  ISWSHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNKRSKSPSCK 156

Query: 162 SKLISRISSRSKSFKQNDQKDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGW 221
             L   +SS     +  +Q      N  D  + +C + G+   D     E ++V  + GW
Sbjct: 157 RYLELDVSSIVNEIQIQNQNQ----NGVDDVAEKC-YPGA--QDELPAAESRLVNLIKGW 212

Query: 222 FSH 224
             +
Sbjct: 217 LPY 212

[Close]

BLAST of CsaV3_3G046350 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-12
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 57  LMLSVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPG--KISWLHVWWHFCLCY 116
           + LSV+KLDGSS D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL  
Sbjct: 52  MRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSC 111

Query: 117 AGQKLVDDADYIASFGIKDGDQLQFVRHV 144
             +KL+DD   +   GI++  Q+ F+ +V
Sbjct: 112 NNEKLLDDNAVLQDVGIRNNSQVTFMPYV 140

The following BLAST results are available for this feature:

BLAST of CsaV3_3G046350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136480.1	9.3e-155	100.00	uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical ...	[more]
KAA0038816.1	3.2e-139	92.83	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. m...	[more]
XP_008466420.1	1.2e-138	92.47	PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U...	[more]
XP_038899214.1	1.8e-134	88.53	uncharacterized protein LOC120086568 [Benincasa hispida]	[more]
XP_022134606.1	1.3e-116	80.65	uncharacterized protein LOC111006831 [Momordica charantia]	[more]

BLAST of CsaV3_3G046350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WS8	1.5e-11	41.57	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]
Q9BV90	3.0e-07	32.58	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q8VIK1	5.2e-07	31.46	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q3ZBQ4	8.8e-07	31.46	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]

BLAST of CsaV3_3G046350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH97	4.5e-155	100.00	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877...	[more]
A0A5A7T9I3	1.5e-139	92.83	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A5D3E6G8	5.9e-139	92.47	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A1S3CR65	5.9e-139	92.47	uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=...	[more]
A0A6J1BY98	6.3e-117	80.65	uncharacterized protein LOC111006831 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of CsaV3_3G046350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32270.1	3.0e-34	47.20	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	8.1e-32	44.65	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	4.2e-28	47.01	Ubiquitin-like superfamily protein	[more]
AT1G80060.1	5.6e-25	38.80	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	1.1e-12	41.57	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 59..143 e-value: 3.8E-25 score: 87.7
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 57..142 e-value: 1.03525E-34 score: 118.775
None	No IPR available	GENE3D	3.10.20.90		coord: 53..149 e-value: 1.3E-33 score: 116.9
None	No IPR available	PANTHER	PTHR14942:SF2	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 19..268
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 19..268
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 57..146 score: 9.112214
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 53..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G046350.1	CsaV3_3G046350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
molecular_function	GO:0005515	protein binding