CsaV3_3G038830 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038830
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	DNA polymerase delta small subunit
Location	chr3: 31933757 .. 31940699 (-)
RNA-Seq Expression	CsaV3_3G038830
Synteny	CsaV3_3G038830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGAGCACTCTACCTAAGTTTATATATCTAATTTGAGATTAAGGTCTTGAAGTTTGATTTTTTTTTTTAATTTTAATTTAAAGGAAACTCATCCTAAAGTCTATATCCCCAAAACAAATAAAAGCTTACTTCTGGCAATTTCCCGCTGAAATTTGTGCCAATTTGCAATAGAAGAAGAAGTTCATATTGGGCTCTCTAATTTGGGGTTGGAAAGGCCGAAATTTATCTCTTCATTCTCTCCATCGTCATGGAAATCGACTCACTGACGAATGTCCACCGCAAGCAGTGTACCTATGAATTATCGGTACCTATTTCTTACTTCGCCGTTCACTTCCTTCTAAATTTTTGGCTTTCCCGCCTTTTTTTCCCTTTTCCTCCAGCACGGCTACTTTGGAAACAACTTGAGGAGTTTTCCTCGCCATTTGGTCGTTTCATTTTCTTAGCAAACGGAGGTCGATGATGATTTTCCGGAATTGGGAACGATCTCCCCCGTTATTTGCGTATTTAGTGTTGTTGATGTTGTTTTTTTTATGGGGTGGGGGGGGGCTAAATTTTTGTTTGTTTGATGTAGGATGAGCAGTACAAGATTCAGAAGGAGACATACAAGGGCCAGCAATACAGTCACATTTACTTTGCTAGACTTCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAACTGGAAACCTCATTTACCTGGTATTTCTCTTATTCTATTTGATACCATGAGACGTTTGGGTGGAAGTATGCTATGCGATGCATGGGGCACACTATGATTCTGGCTTTAGGGTTCTTTAATTTTTTTGTTTTTCCCCTTTTGGTGAGTTTTAGTGTCTTAACCCGTACTAAAACTTAGTGTTTCTATTGACGTGGTTGAACTCAATTTAGGATGGATTTGGACCAATCCTTACTTTGAGCAACTTTTTTTTTAGTTTTTCATCTTGTTAGTGCAACGGTTTAAGCATTGTGCTTTTAATCATAATTTAGGGTAGAACTTAGAAGCAACTTCACGAGGAATGTGTTTTATGGGTTTGGTGAAAATTTGTCTTCAAAACAATGTCCTGCAGTTAGCACCGTATTGGGGTTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGTCTACAAGCACATGAAACTTAAACCTACCATTTTGGACGAGTATTCAAAGGAGGTAATACATCAAACACATATATCTTCTACCATCTGCATGCTTATCTCTGATTTTGGTGTTTTGGGATTGGATTGAGACATTTAAATGGAATATACAGAGATCTGCCATCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATCATCTTGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTGTATGTTACAGGTCTGTATCACAGAGTGAAATTGAATAGAACTATGGTTCCTTTTTCTTTGCTATTGAATCCCCCCAGTAATTGCTTAAAATTGTGATCTACATGTTGCACGTGTTCATCCTTTAACCTCTCTTCTAGTTTTGTAATAGTTTATCCATGTTGTATTTGTTGTTGCTGCTAATGTATTGGCTCTCTTCCCATATTGTGCGTTTAAAAGCATATTCTGCTGTATGCAAAATGATCTCTCTCTCTCTTCTTTTGAAGAATTGCATAAAGTTTTCAACTTTTTGAGCACGTTGATGCAGGATGCACCAAGTTATTCTTGAACTTTGATTTCTAATTGTTCTTTATGAATTGTTCAAAGTTGAATTAATTGCAGCCGGAAAGTTACCACCAGTCGCCATATGTCATGCCTGCAGATTGTAATTTTGGGCTTTTTTTTTTTTAACCAATAAATTATAAGCGCACACTGCTGTATAAACATTTTTTTTCTTTTTATGGGAGCACTTTAATGTATTGCCTAATATTGGTGCCAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTCCGTTGGTGACTTTTTGGTTTTGGATATCCTAGAAGCTGACTTGCCACCTCAGATAGAGCGGCCACTCATATCAAGTAGGATGTGATTACCTTTTTTTCTTATTTAGTGTTTCAATCGTTTAAAATTTGGCCAGGAATGAAATGGATTCAGTTATATTGCAGTGAGAGGGTTAACACGCGTTTGTGTTATAGTTTAATGTTATCGGTTGATGGCATATTAGTTTATTGCTTCTTAAATAGTTGAGGATTCGTTATTCTGTTATTTAGTAGTTTATTGGTAGAGCTTTTTGAGAATGTTAGTATTTTGAAACCTTGAGGATGTATAGATAAGGGCAATTCTTTCACTCAACGATATTTTCATTAACATAATTGATCCTTAAGGCCACTGGCTTTTTCTCTGATATTAGTTGCTCCTACAGATAATTTGGTTATTTCTTAATTAGGAGAGCTACTTCTTGCTTTCCTCCATGGTAACTTGAAGACTATTATTTTTTAGAAGTTTTTGGAGAAAGTTCTTAGAATCGGGTAAGTGGTGGGGTATTTTAAAAAGCCTCCCAGCATGCGCTTAGACTCAAGGCTCAAGGGGCTTTTTTATTATTTAAAAAAAATTAGGGTTTTTCCTTCTTTATTAACTAAAACAATCAAATTTACTAAAGCCTAAATGCAAAATTTCTTGTGCTTAGTGGTCTATTTTTTCATACTTCACTTCAACCATGTTTTCTCTTCTTATTGTAGTGGTTTTATACATAATGCGCCTATAAAAAAGTCCATATTTTCTTTTCGCCTTGCGCTTAACCCTAGAAGACTATTGCAAGCTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGTACTTTAGAATGGTTAGTGTTGTGAAGTACTAAGGCCTTAAGCGTTGGGGGCTTTTCCATTATGTGATAAATGGTAAGGTTTTTTTCTTCTTTATCTTAAAAAAATTACTAGACTGTGAACCTAAACTGCTTTACTGCCTTGGGGGAAGGACCTGAGATGGATGATGGCTACCACTTGATTAGTTCCACTAAGGTCTCCTCGGAGTGGAAGATGGTTTGAATATCGATAATCCTCCAAAGAAAACTATGGCACTCGTCAGGGTCCTTTCTTAATGATTATGGTGGTACATGAGGGGCAAAAATGCTTTGTTACAATGTTTCTTAAGATTCAAATGCATGCAGGTGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGTTTGCTTCATCCTTATAGTTTACTTCTCTAAATGTTTGTCGGTTGCTAAAATTTTAGAACCATTAACTGAACAGGAACAAGGGATTGCGGCTCAAATAGTTCACGTTGTCATTTGTGGGAACTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGGTAGAGATTTCACCAACTATGTAACCTGTCTACCCTGTTTCAATATATTTAAATATGTTGCCAATTTACCAAGATCAGTTTAATTTCTTTAACGAATGTGGTAGTTACTTTGTTATCATGTGTGAGTGAAATAATTGAAGGCCAGTCTTCTTGAACTACTATAAGAAGCCTTGGACAGAACAATCCTTTTATGGTTTATCCTGATTAACTTACTAGGGGTCTTATTTAACAGCACTAGTTAATTATTTATGTGAAGAAATTGATTACATGATGCCATTAATGAGTTTTGGGACGACTAATCAAATGGCAGCATGACCCTGAAACATGTTTGTGTATCCGATATTTTCTTAGGAGTATTGTGAAGGGCAGTCAGTGGTAGAACTAAATCGCATAAATCATGTAGTTTTCTACTTTTGAGAGGAAAATCACAAAAATTGCATCGTTGAAGAATTTCAGTTTGCTCTTTGTTGGTCTTTTGTTGGTGGGTGGCTGTTTTTCAAGTTTCTTTGGTAGTTTTGTAGGAGTCTTTGATTTCAGTAGCTGAAGAAGGTTTGTTTTTCAAGTTTCTTTGGTAGTTTTGTAGGAGTCTTTGATTTCAGTAGCTGAAGAAGGTTTGTTTGTCAAAGTTGTTTCAAAGTTTATCTCTATTTGGTGGGTCAGGCGGGTTGTCCAGTGAGATTTGTTGAGGTGCAAGTAAGCTGGTCCGGACACTCATGGATATTAAAAAAAAAAAAAATTATCTCTATTTGGTTATATTTGTTGTTCCTATCTTTTGTTTCTCTTCTTGTGAGATTTTGTATCTCCTAAACTTTTAATCATTTTCATTACATCAATGAGAAGTAGTTTCTTCCATCAAAAAAGGGTTAAGGGAAAATTTTGAACTCTCCCAGTATTCAATTATTTTTTCTGCAAACTCTAGTGATGTCAGTGATTGTAGGTCTTTTGTTGATGCATGCATGATGTATTTTGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCTTAAAGAGCTCGATATCCTATTGAATCAGGTTCTTATCCAGTTGGTTCTTAGTCCAACCTTTCATCAATTTTATTTTGGTTTCTTCTTTATTCCTAATACCTGATTGTAAATCCACTATCCCGTTTGTCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGATCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGGTCTTTTCTTTACAGCCGAGAACTCCCACTTTTCATTCTTGGTTTTGATTTGTCAATAATGTCATTTTCTTTGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTTAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCAGCCTCATTGGGCAATTGACTGTTTAGTGTGAACTTGAGTGAACCACAGATCAACCGGTAATCCTTTGGTTTCAGGTTTCTTGGAACATCAGGTCAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGACATCTAGCACCAACTGCTCCAAATACTCTTGGTACAAGTCACGTTCTTGTTTGAGTTTTTTTTCCTTGGTGGATATGCCATTGAAACAATCCCTTTTCAACTCAAAGGCTGCATCACACGAGATTATCCAGATTTAGCTATAGTATTTCATTAAACAAAATCATTAAAAAACTATATAAAACTTCCCAATGTATTTTTTATATTATTCAACTTACAGGTTGTTACCCATTCACTGACCGAGATCCTTTCCTGATCGAGAGCTGTCCTCATGTTTATTTTATTGGGAATCAGGAAAAATTTGATACTCGTTTAATGAAGGGTATATTTTCACATAAACCCTTTATATCAGTTATCATAATTGCTCATTTCCTTCTCCTAAATAATAAATGAACGAGGTTATATATTTTCATGTATATGCTTTTTGAAAATGCAGGAGCTGAAGGGCAGATGGTAAGACTCATTGCGATTCCAAGATTTTGTGAGACGGGGATTGCTGTAATGGTAATTTGCTTTTACTTCAATTCACCTTTTAATATTGTTGCTGCAACAGCAATTTCTTTTTACTTCAATTCAGCTTTACCCATTATTTATACTGTCACGTAGCTCCCTACTTGTTACTGTTGACATGCAACTTTGCTGGACTAGATCAAAGGTTAAAATCATGTTGGCTGGTTATAAAGAGAATTACCAACAGTGATATTTATGTCAGCATCTCCCTAGTCATTACCTTCCGTCCTTTACCCATAACCCAATATTTTTGGTTCTTTTTGGTTTGGTTTTTCAGTTTGGGTTAATTTCTTGTCCGGTTGTCCTAGATCAAAGTTCTGTCAACTGTAAAAAATGAAAGTATGTTGTTTATAAAGAGAATCATTATACCTTTCTCAATGGTTATCACTTATCAGTAAAATACAAAATGCATGGCATCTAATATAAGCCTCTTAAAAAATCAACATTAGGAAGAATGAGACTGTCGAATTAATTTTGGTTCCAGAAACTTTAGCTAAAATGGAGATTTTTTTTTTCCAAAATAATTATTTTCACATACTTTTTTTCTGAAATTATTATGAGGTTGATACGCAAGCATTAATCTCATTGAAGACATGGTGGTGGCAAGAAGTTGCTGTGCTCAACAAACTCTGGCCCCAATTTGTTTGTTGAACTTTTTAATGTTCATCCAATCAAATCATCTACATCTTCATTTCTATAGGGACTTCATTAAATTTGAGAAAGGGCAAAGGCTATGGATTTTCTTCTTTCTTTTTTTGTATTATTTCTTGGGTCGTTTTATCCTCTGCAGCAATACGGTTTCATTCCGAAGATAATAGTCTTCCTTTCCTTCCTTTACAGCTCAACTTGAGAAACCTTGAATGCCACACTCTGAGTCTTGGGACTGAATTCAGCTGAACATTATGATGAATGAATCGTGAAAGGATATCGAGAATCTGATTTTCCAGGAAAGTGATTATCATCTAAAAGTACCTGCTTCTATGAAAGTGGAGCAGATGAGGCCTTTAATGAAAATTTTAGATGTTTGTTTATGGTGTGAAAAGGGTTTGGAGTGAAATGCAGAATGATCTCCATTTTCCCAAACAATAGATCACATCTTCTAGGGAGAATCAGCTTGGAGAGGAAGAGTTAAATCAAAAGAACTGAATAGTTATCCTCCAAACTCCAAAGTCCAAACATATTAATTGGCTCTGTTTCTTGTAGGTCCAGCCTCAACAGTGTAGAAATTTGTAGTGTTGGCTTGAAATTTGTATGTGCCATAGAAGCATATGCTTTTTCAACCGCTAATATATAGATTAGTTTTGTGTTATGAGTTTTGGTTGGTGCTTGTGTTATTTTTGGAGAAAATTTAAGTTGTTTGGTAGATCTAATTATTTGTTAATATATATAAAATCACTTTTCACTGTATTCTTTCATCCTCATTTCACGTTCCCAGAAAATT

mRNA sequence

ATGGAAATCGACTCACTGACGAATGTCCACCGCAAGCAGTGTACCTATGAATTATCGGATGAGCAGTACAAGATTCAGAAGGAGACATACAAGGGCCAGCAATACAGTCACATTTACTTTGCTAGACTTCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAACTGGAAACCTCATTTACCTGTTAGCACCGTATTGGGGTTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGTCTACAAGCACATGAAACTTAAACCTACCATTTTGGACGAGTATTCAAAGGAGAGATCTGCCATCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATCATCTTGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTGTATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTCCGTTGGTGACTTTTTGGTTTTGGATATCCTAGAAGCTGACTTGCCACCTCAGATAGAGCGGCCACTCATATCAAGTGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTCACGTTGTCATTTGTGGGAACTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCTTAAAGAGCTCGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGATCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTTAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGACATCTAGCACCAACTGCTCCAAATACTCTTGGTTGTTACCCATTCACTGACCGAGATCCTTTCCTGATCGAGAGCTGTCCTCATGTTTATTTTATTGGGAATCAGGAAAAATTTGATACTCGTTTAATGAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCGATTCCAAGATTTTGTGAGACGGGGATTGCTGTAATGCTCAACTTGAGAAACCTTGAATGCCACACTCTGAGTCTTGGGACTGAATTCAGCTGA

Coding sequence (CDS)

ATGGAAATCGACTCACTGACGAATGTCCACCGCAAGCAGTGTACCTATGAATTATCGGATGAGCAGTACAAGATTCAGAAGGAGACATACAAGGGCCAGCAATACAGTCACATTTACTTTGCTAGACTTCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAACTGGAAACCTCATTTACCTGTTAGCACCGTATTGGGGTTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGTCTACAAGCACATGAAACTTAAACCTACCATTTTGGACGAGTATTCAAAGGAGAGATCTGCCATCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATCATCTTGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTGTATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTCCGTTGGTGACTTTTTGGTTTTGGATATCCTAGAAGCTGACTTGCCACCTCAGATAGAGCGGCCACTCATATCAAGTGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTCACGTTGTCATTTGTGGGAACTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCTTAAAGAGCTCGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGATCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTTAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGACATCTAGCACCAACTGCTCCAAATACTCTTGGTTGTTACCCATTCACTGACCGAGATCCTTTCCTGATCGAGAGCTGTCCTCATGTTTATTTTATTGGGAATCAGGAAAAATTTGATACTCGTTTAATGAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCGATTCCAAGATTTTGTGAGACGGGGATTGCTGTAATGCTCAACTTGAGAAACCTTGAATGCCACACTCTGAGTCTTGGGACTGAATTCAGCTGA

Protein sequence

MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSLGTEFS*

Homology

[Close]

BLAST of CsaV3_3G038830 vs. NCBI nr
Match: XP_004136567.1 (DNA polymerase delta small subunit [Cucumis sativus] >KGN59302.1 hypothetical protein Csa_001594 [Cucumis sativus])

HSP 1 Score: 898.7 bits (2321), Expect = 2.0e-257
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

Query: 421 LNLRNLECHTLSLGTEFS 439
           LNLRNLECHTLSLGTEFS
Sbjct: 421 LNLRNLECHTLSLGTEFS 438

[Close]

BLAST of CsaV3_3G038830 vs. NCBI nr
Match: XP_008443055.1 (PREDICTED: DNA polymerase delta small subunit [Cucumis melo])

HSP 1 Score: 882.1 bits (2278), Expect = 2.0e-252
Identity = 429/438 (97.95%), Postives = 432/438 (98.63%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  NVHRKQC YE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 LNLRNLECHTLSLGTEFS 439
           LNLRNLECHTLS GTEFS
Sbjct: 423 LNLRNLECHTLSFGTEFS 440

[Close]

BLAST of CsaV3_3G038830 vs. NCBI nr
Match: TYK25400.1 (DNA polymerase delta small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 863.6 bits (2230), Expect = 7.3e-247
Identity = 429/475 (90.32%), Postives = 432/475 (90.95%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  NVHRKQC YE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 -------------------------------------LNLRNLECHTLSLGTEFS 439
                                                LNLRNLECHTLS GTEFS
Sbjct: 423 HLYCHVATYSLLLTCNFAGLAIRFHSKDNSLPFLPLQLNLRNLECHTLSFGTEFS 477

[Close]

BLAST of CsaV3_3G038830 vs. NCBI nr
Match: XP_038906226.1 (DNA polymerase delta small subunit isoform X3 [Benincasa hispida])

HSP 1 Score: 857.1 bits (2213), Expect = 6.8e-245
Identity = 415/438 (94.75%), Postives = 424/438 (96.80%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDSL N+ RKQCTYE+ DEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPH 60

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVCTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSANPLVRPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSG VLLPSVYVTGIVLAL GKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGAVLLPSVYVTGIVLALRGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSG+SIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 181 YVIFVSGISIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQ+A GLPVDIMPGSSDPANFSLPQQPLHRCL PGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQIAVGLPVDIMPGSSDPANFSLPQQPLHRCLSPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN+DDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCE G+AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLECHTLSLGTEFS 439
           LNLRNLECHTLS GTEFS
Sbjct: 421 LNLRNLECHTLSFGTEFS 438

[Close]

BLAST of CsaV3_3G038830 vs. NCBI nr
Match: KAA0043732.1 (DNA polymerase delta small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 846.7 bits (2186), Expect = 9.2e-242
Identity = 412/421 (97.86%), Postives = 416/421 (98.81%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  NVHRKQC YE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 L 422
           +
Sbjct: 423 V 423

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy Swiss-Prot
Match: O48520 (DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2 SV=2)

HSP 1 Score: 707.6 bits (1825), Expect = 8.8e-203
Identity = 327/438 (74.66%), Postives = 385/438 (87.90%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS     RKQ  Y   DE+++IQKE Y+GQQYS IYFARLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPV  VLGLE+GKEC+IVGT++KHMKLKP +LDEYSKERS  PLVKPHNFMHPDD+L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKL+G  L P++YVTG+V+ALHGKET+ G+F V D+LEA LPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YV+ +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           S YNTFRSCTNPH F++DN RFLGTSGQN+DDL KYSEAK KL+F+ERTLRWRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQ+K+D RL+KG+EGQ+VRLI IP+FCETGIAV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

Query: 421 LNLRNLECHTLSLGTEFS 439
           +NLRNLECHTLS  T+ +
Sbjct: 421 VNLRNLECHTLSFSTQIN 438

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy Swiss-Prot
Match: Q9LRE5 (DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=POLD2 PE=2 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.2e-193
Identity = 315/429 (73.43%), Postives = 371/429 (86.48%), Query Frame = 0


Query: 9   VHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLG 68
           + RKQ  Y   DE+Y IQ E Y+GQQYSHIYF RLH MR +LH+LV +WKPHLPV+TVLG
Sbjct: 1   MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60

Query: 69  LEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKL 128
           LEEGK+C+IVGT+YKHMKLKP+ILDEYSKERSAIPLVKPHNFMHPDDHL+LEDESGRV L
Sbjct: 61  LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL 120

Query: 129 SGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGL 188
           +G  + P+ YVTG+V+ALHGKETS G+FLV DILEA +PPQI  P I +EDKYV+FVSGL
Sbjct: 121 AG-AIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSI-NEDKYVVFVSGL 180

Query: 189 SIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAK 248
           SIGS   NPLQFQLL+DHITGHLGDE EQ IA+ IV VV+ GNSV I     NGQ +++K
Sbjct: 181 SIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASK 240

Query: 249 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 308
           DQ+++ EP+KELDI+L QL A LPVD+MPGS+DPANFSLPQQPLHRCLF G++ YNTF S
Sbjct: 241 DQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSS 300

Query: 309 CTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPF 368
           C+NPH FELD+ RF+GTSGQN+DDL KYS+AKDKLEF+ERTLRWRHLAPTAPN+LGCYP+
Sbjct: 301 CSNPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPY 360

Query: 369 TDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLEC 428
           TD+DPFL+ESCPHVYF+GNQ+K++T+L++G E Q VRLI IPRFC++G+AVMLNLRNLEC
Sbjct: 361 TDKDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLEC 420

Query: 429 HTLSLGTEF 438
            TLS  T F
Sbjct: 421 STLSFSTSF 427

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy Swiss-Prot
Match: O35654 (DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 5.0e-97
Identity = 189/424 (44.58%), Postives = 267/424 (62.97%), Query Frame = 0


Query: 15  TYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGK 74
           TY  S + +++ + ++  +QY+HIY  RL  MR  L S    +W   + V  +  L+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-NRQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQPGE 90

Query: 75  ECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKLSGDVL 134
           +C +VGT++K M L+P+IL E S+E + +P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 135 LPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSS 194
           + S  VTG VLA+ G     G F V D   ADL PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVLGSAKDDGRFQVEDHCFADLAPQKPVPPLDT-DRFVLLVSGLGLGGG 210

Query: 195 ISNP-LQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAK 254
                L  QLLVD +TG LGDE EQ  AA +  V++ GN    + +    I   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKK 270

Query: 255 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 314
            Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL 330

Query: 315 CTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPF 374
            TNP+   +D  RFLGTSGQNV D+ +YS  +D LE +E TLR RH++PTAP+TLGCYPF
Sbjct: 331 VTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPF 390

Query: 375 TDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLEC 433
              DPF+   CPHVYF GN   F +++++G E Q+V L+A+P F  T  A ++NLR+L C
Sbjct: 391 YKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLAC 450

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy Swiss-Prot
Match: Q6AXY4 (DNA polymerase delta subunit 2 OS=Rattus norvegicus OX=10116 GN=Pold2 PE=1 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.9e-96
Identity = 190/424 (44.81%), Postives = 264/424 (62.26%), Query Frame = 0


Query: 15  TYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGK 74
           TY  S + +++ + ++  +QY+HIY  RL  MR  L S    +W   + V  +  L+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-NRQYAHIYATRLIQMRPFLVSRAQQHWGSQVEVKKLCELQPGE 90

Query: 75  ECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKLSGDVL 134
           +C +VGT++K M L+P+IL E S+E + IP      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 135 LPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSS 194
           + S  VTG VLA+ G     G F V D   ADL PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVFGSVKDDGKFQVEDHCFADLAPQNPVPPLDT-DRFVLLVSGLGLGGG 210

Query: 195 ISNP-LQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAK 254
                L  QLLVD +TG LGDE EQ  AA +  V++ GN    + +    I   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKK 270

Query: 255 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 314
            Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYATLQL 330

Query: 315 CTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPF 374
            TNP+   +D  RFLGTSGQNV D+ +YS  +D LE +E TLR RH++PTAP+TLGCYPF
Sbjct: 331 VTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPF 390

Query: 375 TDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLEC 433
              DPF+   CPHVYF GN   F +++++G E Q V L+A+P F  T  A ++NLR L C
Sbjct: 391 YKTDPFIFAECPHVYFCGNTPSFGSKVIRGPEDQAVLLVAVPDFSSTQTACLVNLRGLTC 450

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy Swiss-Prot
Match: P49005 (DNA polymerase delta subunit 2 OS=Homo sapiens OX=9606 GN=POLD2 PE=1 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.5e-96
Identity = 188/424 (44.34%), Postives = 265/424 (62.50%), Query Frame = 0


Query: 15  TYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLV-SNWKPHLPVSTVLGLEEGK 74
           TY  S + +++ + ++  +QY+HIY  RL  MR  L +    +W   + V  +  L+  +
Sbjct: 31  TYTNSSQPFRLGERSF-SRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPEE 90

Query: 75  ECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKLSGDVL 134
           +C +VGT++K M L+P+IL E S+E + +P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  KCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 135 LPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSS 194
           + S  VTG VLA+ G     G FLV D   ADL PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPLDT-DRFVLLVSGLGLGGG 210

Query: 195 ISNP-LQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAK 254
                L  QLLVD +TG LGDE EQ  AA +  V++ GN    S +    I   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKK 270

Query: 255 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 314
            Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL 330

Query: 315 CTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPF 374
            TNP+   +D  RFLGTSGQNV D+ +YS  +D LE +E TLR RH++PTAP+TLGCYPF
Sbjct: 331 VTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPF 390

Query: 375 TDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLEC 433
              DPF+   CPHVYF GN   F +++++G E Q V L+ +P F  T  A ++NLR+L C
Sbjct: 391 YKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLAC 450

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy TrEMBL
Match: A0A0A0LF21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1)

HSP 1 Score: 898.7 bits (2321), Expect = 9.9e-258
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

Query: 421 LNLRNLECHTLSLGTEFS 439
           LNLRNLECHTLSLGTEFS
Sbjct: 421 LNLRNLECHTLSLGTEFS 438

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy TrEMBL
Match: A0A1S3B7Y0 (DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 SV=1)

HSP 1 Score: 882.1 bits (2278), Expect = 9.6e-253
Identity = 429/438 (97.95%), Postives = 432/438 (98.63%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  NVHRKQC YE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 LNLRNLECHTLSLGTEFS 439
           LNLRNLECHTLS GTEFS
Sbjct: 423 LNLRNLECHTLSFGTEFS 440

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy TrEMBL
Match: A0A5D3DQ54 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005420 PE=3 SV=1)

HSP 1 Score: 863.6 bits (2230), Expect = 3.5e-247
Identity = 429/475 (90.32%), Postives = 432/475 (90.95%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  NVHRKQC YE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 -------------------------------------LNLRNLECHTLSLGTEFS 439
                                                LNLRNLECHTLS GTEFS
Sbjct: 423 HLYCHVATYSLLLTCNFAGLAIRFHSKDNSLPFLPLQLNLRNLECHTLSFGTEFS 477

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy TrEMBL
Match: A0A5A7TKC4 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00610 PE=3 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.5e-242
Identity = 412/421 (97.86%), Postives = 416/421 (98.81%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  NVHRKQC YE+SDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KGAEGQMVRLIAIPRFCETGIAVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 L 422
           +
Sbjct: 423 V 423

[Close]

BLAST of CsaV3_3G038830 vs. ExPASy TrEMBL
Match: A0A6J1J5X9 (DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 PE=3 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 2.0e-234
Identity = 394/438 (89.95%), Postives = 413/438 (94.29%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS  N+ RKQCTYE+ DEQYKIQKETYKGQQYSHIYF RLHL+RTILHSLVS WKPH
Sbjct: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           D+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +EDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPRG+L
Sbjct: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDL+KYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KG+EGQMVRLIAIPRFCE G+AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLECHTLSLGTEFS 439
           LNLRNL+CH LS  TEFS
Sbjct: 421 LNLRNLDCHVLSFETEFS 438

[Close]

BLAST of CsaV3_3G038830 vs. TAIR 10
Match: AT2G42120.2 (DNA polymerase delta small subunit )

HSP 1 Score: 707.6 bits (1825), Expect = 6.2e-204
Identity = 327/438 (74.66%), Postives = 385/438 (87.90%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
           MEIDS     RKQ  Y   DE+++IQKE Y+GQQYS IYFARLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120
           LPV  VLGLE+GKEC+IVGT++KHMKLKP +LDEYSKERS  PLVKPHNFMHPDD+L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180
           DESGRVKL+G  L P++YVTG+V+ALHGKET+ G+F V D+LEA LPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240
           YV+ +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
           S YNTFRSCTNPH F++DN RFLGTSGQN+DDL KYSEAK KL+F+ERTLRWRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQ+K+D RL+KG+EGQ+VRLI IP+FCETGIAV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

Query: 421 LNLRNLECHTLSLGTEFS 439
           +NLRNLECHTLS  T+ +
Sbjct: 421 VNLRNLECHTLSFSTQIN 438

[Close]

BLAST of CsaV3_3G038830 vs. TAIR 10
Match: AT2G42120.1 (DNA polymerase delta small subunit )

HSP 1 Score: 706.1 bits (1821), Expect = 1.8e-203
Identity = 328/439 (74.72%), Postives = 386/439 (87.93%), Query Frame = 0


Query: 1   MEIDSLTNVHRKQCTY-ELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKP 60
           MEIDS     RKQ  Y  L DE+++IQKE Y+GQQYS IYFARLHLMRT+L+SL   WK 
Sbjct: 1   MEIDSEKIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 60

Query: 61  HLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVL 120
           HLPV  VLGLE+GKEC+IVGT++KHMKLKP +LDEYSKERS  PLVKPHNFMHPDD+L+L
Sbjct: 61  HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLIL 120

Query: 121 EDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSED 180
           EDESGRVKL+G  L P++YVTG+V+ALHGKET+ G+F V D+LEA LPPQIERP+   ED
Sbjct: 121 EDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQED 180

Query: 181 KYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGI 240
           KYV+ +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR +
Sbjct: 181 KYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKL 240

Query: 241 LNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPG 300
           +NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPG
Sbjct: 241 INGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPG 300

Query: 301 SSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 360
           SS YNTFRSCTNPH F++DN RFLGTSGQN+DDL KYSEAK KL+F+ERTLRWRHLAPTA
Sbjct: 301 SSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTA 360

Query: 361 PNTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAV 420
           PNTLGCYPFTDRDPFLIE+CPHVYF+GNQ+K+D RL+KG+EGQ+VRLI IP+FCETGIAV
Sbjct: 361 PNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAV 420

Query: 421 MLNLRNLECHTLSLGTEFS 439
            +NLRNLECHTLS  T+ +
Sbjct: 421 AVNLRNLECHTLSFSTQIN 439

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136567.1	2.0e-257	100.00	DNA polymerase delta small subunit [Cucumis sativus] >KGN59302.1 hypothetical pr...	[more]
XP_008443055.1	2.0e-252	97.95	PREDICTED: DNA polymerase delta small subunit [Cucumis melo]	[more]
TYK25400.1	7.3e-247	90.32	DNA polymerase delta small subunit [Cucumis melo var. makuwa]	[more]
XP_038906226.1	6.8e-245	94.75	DNA polymerase delta small subunit isoform X3 [Benincasa hispida]	[more]
KAA0043732.1	9.2e-242	97.86	DNA polymerase delta small subunit [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_3G038830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48520	8.8e-203	74.66	DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2...	[more]
Q9LRE5	8.2e-193	73.43	DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
O35654	5.0e-97	44.58	DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2	[more]
Q6AXY4	1.9e-96	44.81	DNA polymerase delta subunit 2 OS=Rattus norvegicus OX=10116 GN=Pold2 PE=1 SV=1	[more]
P49005	2.5e-96	44.34	DNA polymerase delta subunit 2 OS=Homo sapiens OX=9606 GN=POLD2 PE=1 SV=1	[more]

BLAST of CsaV3_3G038830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF21	9.9e-258	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1	[more]
A0A1S3B7Y0	9.6e-253	97.95	DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 ...	[more]
A0A5D3DQ54	3.5e-247	90.32	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TKC4	4.5e-242	97.86	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1J5X9	2.0e-234	89.95	DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 P...	[more]

BLAST of CsaV3_3G038830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42120.2	6.2e-204	74.66	DNA polymerase delta small subunit	[more]
AT2G42120.1	1.8e-203	74.72	DNA polymerase delta small subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.60.21.50		coord: 169..437 e-value: 3.1E-111 score: 373.4
None	No IPR available	GENE3D	2.40.50.430		coord: 40..166 e-value: 2.5E-35 score: 123.0
IPR040663	DNA polymerase delta subunit, OB-fold domain	PFAM	PF18018	DNA_pol_D_N	coord: 34..161 e-value: 1.2E-39 score: 135.4
IPR007185	DNA polymerase alpha/delta/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 182..393 e-value: 7.3E-50 score: 169.2
IPR024826	DNA polymerase delta/II small subunit family	PANTHER	PTHR10416	DNA POLYMERASE DELTA SUBUNIT 2	coord: 9..433
IPR041863	DNA polymerase delta subunit 2, C-terminal domain	CDD	cd07387	MPP_PolD2_C	coord: 181..433 e-value: 2.30677E-136 score: 390.077

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038830.1	CsaV3_3G038830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
molecular_function	GO:0003677	DNA binding