CsaV3_3G038330 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	VQ domain-containing protein
Location	chr3: 31541790 .. 31542600 (+)
RNA-Seq Expression	CsaV3_3G038330
Synteny	CsaV3_3G038330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGAAAGTCAATTAGCAAACAAAATGGGTAGTGCATAATTTATTTGCATAACAAAATACTTTTTCATACCTAAAACTCTTAAATCTTCTTCAAATTGGTAAATGACCAATTAATTCAACAAACAATCAAACACAAATTGACTTGGTACTAAAATCATATTATATTACGATCCAAACGAATAAGAAATCCATTGATTATCATTAATCATTATATAAATCCCAACCTCTTTCCTTCCTAATTCAAGAAGAAGATTGAAATTAAAAATCTCACCAATTTTCGAAGCCCCACCGGGAAATTGAACAGCAACAATGATGATAACTTCCGCCGCCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTGAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAGCTTCCGCCGTGGATCCGTCGTCGGTTCGGGGGTTATTTGTAGGTGTAGCCGAGAGAGTGTTTCAGTACTATCACTGATTCTCTAGTTGTATATGATTATTCCTTTGGAAAGGAAATATTATAATCGAATTGCATAATTTTGTTCAAAGTAATTTCTAATTTTG

mRNA sequence

ATGATGATAACTTCCGCCGCCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTGAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAG

Coding sequence (CDS)

ATGATGATAACTTCCGCCGCCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTGAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAG

Protein sequence

MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS*

Homology

[Close]

BLAST of CsaV3_3G038330 vs. NCBI nr
Match: KGN59247.1 (hypothetical protein Csa_002000 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 113
           PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 112

[Close]

BLAST of CsaV3_3G038330 vs. NCBI nr
Match: KAA0043778.1 (protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 8.4e-38
Identity = 93/115 (80.87%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MM+   AARN SQLRGPRPPPLTVNK SSTNI KKSTKN      NQR+RRSPIIIYLRS
Sbjct: 1   MMMNFTAARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQRNRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 113
           PK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 61  PKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 109

[Close]

BLAST of CsaV3_3G038330 vs. NCBI nr
Match: XP_008443599.1 (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-36
Identity = 91/109 (83.49%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 7   AARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHV 66
           AARN SQLRGPRPPPLTVNK SSTNI KKSTKN      NQR+RRSPIIIYLRSPK+IHV
Sbjct: 5   AARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQRNRRSPIIIYLRSPKIIHV 64

Query: 67  RPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 113
           RPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 65  RPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of CsaV3_3G038330 vs. NCBI nr
Match: KAG6596645.1 (VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028183.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.3 bits (329), Expect = 5.1e-27
Identity = 80/113 (70.80%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 5   SAAARNH--SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 64
           ++AARN    +LRGPRPPPLTVNK SST I KKST  N  PI N   RR P+I+YLRSPK
Sbjct: 2   NSAARNQLPLRLRGPRPPPLTVNK-SSTKIFKKSTTTNLRPIPN---RRDPVIVYLRSPK 61

Query: 65  VIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 113
           +IHVRPEEFKSFVQRLTGN SSVAVVA+S SATGMI D   E  VS CN IPS
Sbjct: 62  IIHVRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 110

[Close]

BLAST of CsaV3_3G038330 vs. NCBI nr
Match: KAE8125233.1 (hypothetical protein FH972_020066 [Carpinus fangiana])

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-11
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 7   AARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHV 66
           +++   QL+GPRP  L V KSS+     K  KN P P    R R SP+IIYL SPKVIHV
Sbjct: 2   SSQTRKQLQGPRPALLMVGKSST-----KIIKNRPFPAG--RSRCSPVIIYLESPKVIHV 61

Query: 67  RPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDE 102
           RPEEF   VQRLTGN  +  + +S  S+  M+ DE
Sbjct: 62  RPEEFMDTVQRLTGNIQAPCIPSSPPSSCAMVADE 89

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-06
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 12 SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEF 71
          +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRP----HGRASPVIIYAHSPKVIHTRAEDF 66

Query: 72 KSFVQRLTG 81
           + VQRLTG
Sbjct: 67 MALVQRLTG 71

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 8.8e-06
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVR 72
          Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H  
Sbjct: 23 QICGPRPSPLSVHKDSH---KIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 82

Query: 73 PEEFKSFVQRLTGNRSSV 86
            EF + VQRLTG  S V
Sbjct: 83 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 17  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQ 76
           P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ
Sbjct: 41  PSPPTLKVNKDS--HVIKKPP--SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQ 100

Query: 77  RLTG 81
           +LTG
Sbjct: 101 KLTG 100

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIH 75
           GP+P PL V   S   I K      +P P   Q H++          P+ IY  +P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +SS S+T    D
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKD 107

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy TrEMBL
Match: A0A0A0LEW5 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.0e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 113
           PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 112

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy TrEMBL
Match: A0A5D3DP92 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004940 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.1e-38
Identity = 93/115 (80.87%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MM+   AARN SQLRGPRPPPLTVNK SSTNI KKSTKN      NQR+RRSPIIIYLRS
Sbjct: 1   MMMNFTAARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQRNRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 113
           PK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 61  PKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 109

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy TrEMBL
Match: A0A1S3B975 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.9e-37
Identity = 91/109 (83.49%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 7   AARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHV 66
           AARN SQLRGPRPPPLTVNK SSTNI KKSTKN      NQR+RRSPIIIYLRSPK+IHV
Sbjct: 5   AARNQSQLRGPRPPPLTVNK-SSTNIFKKSTKN-----PNQRNRRSPIIIYLRSPKIIHV 64

Query: 67  RPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 113
           RPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 65  RPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy TrEMBL
Match: A0A2N9GB07 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.7e-13
Identity = 49/89 (55.06%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 5  SAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVI 64
          S   + + QL+GPRP PLTVNKSS+        K  PLP    R R SP+IIYL+SPKVI
Sbjct: 3  SQTRKKYLQLQGPRPAPLTVNKSST------KIKKQPLP---NRTRSSPVIIYLQSPKVI 62

Query: 65 HVRPEEFKSFVQRLTGNRSSVAVVASSCS 94
          HVRPEEF   VQ+LTGN++   V A S S
Sbjct: 63 HVRPEEFMGIVQQLTGNQAPSRVAADSSS 82

[Close]

BLAST of CsaV3_3G038330 vs. ExPASy TrEMBL
Match: A0A5N6RVJ8 (VQ domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020066 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 7   AARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHV 66
           +++   QL+GPRP  L V KSS+     K  KN P P    R R SP+IIYL SPKVIHV
Sbjct: 2   SSQTRKQLQGPRPALLMVGKSST-----KIIKNRPFPAG--RSRCSPVIIYLESPKVIHV 61

Query: 67  RPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDE 102
           RPEEF   VQRLTGN  +  + +S  S+  M+ DE
Sbjct: 62  RPEEFMDTVQRLTGNIQAPCIPSSPPSSCAMVADE 89

[Close]

BLAST of CsaV3_3G038330 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 2.8e-07
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 12 SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEF 71
          +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRP----HGRASPVIIYAHSPKVIHTRAEDF 66

Query: 72 KSFVQRLTG 81
           + VQRLTG
Sbjct: 67 MALVQRLTG 71

[Close]

BLAST of CsaV3_3G038330 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 51.2 bits (121), Expect = 6.3e-07
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVR 72
          Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H  
Sbjct: 23 QICGPRPSPLSVHKDSH---KIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 82

Query: 73 PEEFKSFVQRLTGNRSSV 86
            EF + VQRLTG  S V
Sbjct: 83 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of CsaV3_3G038330 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 35/95 (36.84%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIH 75
           GPRP PL V   S   I K      +P P   Q H++          P+IIY  SP++IH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +S  S+T    D
Sbjct: 73  THPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKD 107

[Close]

BLAST of CsaV3_3G038330 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 17  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQ 76
           P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ
Sbjct: 41  PSPPTLKVNKDS--HVIKKPP--SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQ 100

Query: 77  RLTG 81
           +LTG
Sbjct: 101 KLTG 100

[Close]

BLAST of CsaV3_3G038330 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 47.4 bits (111), Expect = 9.0e-06
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIH 75
           GP+P PL V   S   I K      +P P   Q H++          P+ IY  +P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +SS S+T    D
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKD 107

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038330 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59247.1	1.9e-53	100.00	hypothetical protein Csa_002000 [Cucumis sativus]	[more]
KAA0043778.1	8.4e-38	80.87	protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucu...	[more]
XP_008443599.1	1.2e-36	83.49	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
KAG6596645.1	5.1e-27	70.80	VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma su...	[more]
KAE8125233.1	3.0e-11	50.53	hypothetical protein FH972_020066 [Carpinus fangiana]	[more]

BLAST of CsaV3_3G038330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA36	3.9e-06	44.93	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8LGD5	8.8e-06	42.31	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
Q9LS54	4.4e-05	42.19	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
F4HWF9	1.3e-04	34.74	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of CsaV3_3G038330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW5	9.0e-54	100.00	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=...	[more]
A0A5D3DP92	4.1e-38	80.87	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B975	5.9e-37	83.49	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1	[more]
A0A2N9GB07	7.7e-13	55.06	VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 ...	[more]
A0A5N6RVJ8	1.5e-11	50.53	VQ domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020066 PE=4...	[more]

BLAST of CsaV3_3G038330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68450.1	2.8e-07	44.93	VQ motif-containing protein	[more]
AT3G18690.1	6.3e-07	42.31	MAP kinase substrate 1	[more]
AT1G21326.1	1.8e-06	36.84	VQ motif-containing protein	[more]
AT3G18360.1	3.1e-06	42.19	VQ motif-containing protein	[more]
AT1G21320.1	9.0e-06	34.74	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 60..82 e-value: 4.2E-8 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..47
None	No IPR available	PANTHER	PTHR33143:SF51	PROTEIN MKS1-LIKE	coord: 6..99
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 6..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038330.1	CsaV3_3G038330.1	mRNA