CsaV3_3G038100 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038100
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Nuclear transcription factor Y subunit
Location	chr3: 31370435 .. 31375282 (-)
RNA-Seq Expression	CsaV3_3G038100
Synteny	CsaV3_3G038100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGTTGGATTTTTTATTTTAAAAAAATTGTTATGTAAAATAATTAAGGGAAAAAGTGATGGAAAGAATTTATGCAGTTATAATGAATGTGGTTCATATTATTAATGGAAGCTTTCCATATAGAAACAAAATTGTTGCATGCAAGGTAAAGATCATTGGTTATTGGGTTTTAGTTATTTTACACTTATATTTGTATTAATTCTTTTTCTTTTCTCTCTCCTCTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTAGTGCTTTGCTTGAAATGTACCAACAGCACTCCTATCAAATGGGGTTCCTGTGCCTCTATTCAATACCTGCTTCTGCTTCTTCTTCTTCTTTTTGCTGATTCTGAAATTGTAAGGACCGTTTTTTTTTTTTTTTTTGGGTTTTACCCTCTGATTTTTGTCCCTTTCTCTTCTTCTTCTTCTATGAACTAAGGTTTTGCAGCTTCAGTCCTCCATTTTTTCCATCTGAGGTTGTTTTTTGGGACTTCTTTTCATCTGGGCTCGTTTCATCCTTCTTTTGTTTGCTTCTATTTGATATTCTTTTTGTTCTATCTATTGTCTATGGCCTGTTGTTTGGGGGAAATTTTTGCTTATTGTTATTGTTTCACTGTTCTGTGATTGAAGGAAGTCCATGTGGGTGTTTTTCCCCTCTTGTTTTTTGCCCTTTTTAAAGTGGCTATTCATCTATTTTCTTTTTGGTTAATCCTTTCAGTTTGTTTGACTTGTGCTTCCCATTTTTGGATTAAACGTCTCATAGGCTTTTTGTTCCAACGCTGAATTGTAGGAATTGGTGTGAAGGGATTAGTAAAAACATCTGTTTGAAATGGCACCACAAACTGGGTGTTTGAAAGAACATGAACGAATTATTCCTAATTCACTTGGTCAGTTGTCACCTACTCCTGCTCGTTTATGGAGTGCTCTTGGGCAAGGTTCTCAATCAATCTTTGGAGATTTTGGTCAAGTGAAGGCTTCATCAATTCAACTTGGCAGTAATGGGAAGGAGTTCAATGGCACTAAACAAGTTGTTGCTCACGGCTTGGACAAACTGAACACAGCTCCATTTTCTATCTATCCTGGTAACTTTTTGTTTGATTGATTCATTTTCATCCCCCAAAGAAATCTTTGGAAGTTAGATGGTTTCTTCTTCTTCTTCTTCTTATTATTATTATGGTGGATATAGGATTTTTTTGAAGTTAATTAGAGGGGGCAAAGGAATCATTCATTCACAAAATCAATAGCTTCTCGAAAAATTAATAACATAAGGGGATTGATGAGGGAGTTGGATGTTTCTTTCCTGACCACTGGAAATAAATGTCTATAAGAAGAAACATGTTCGGGGAGAAGGGGCCTAAATTGTTAGGTGATTGAATCGACTTGTAGCTTAGTAGCTGAGTTGGCTTAGGCTGGGGGGGCAGGGAAACATCTGAATATCTCCAAGATTACATCCTCAATGCGAAAATAACTAATATTGAGTTCAATCCAAGAGTAAAGATTTTCCTCCTTCAATATTAGCTAGAATATCATCAAGGATTTAGCATCATAGAGCAATAAAGCTCAGATGTTAATGATTATAAAACAAGGGAAAGAGAATGAAATTCAAGATAGACCTGTTTTCCCCTGTTTTTGAGCCTTAGTTAAAATGTCGATGATAATGGTGAGTTTTCTATCCATGCAGGTGACTATAAGATTTCGATGGATGCACAAAAACCTTCACCAGTGTTTTCCCTGCAATCACCCCTGACAGAATATCACAATCGTTTTGAGCTCGGATTTGGCCAGCCCCTGGTATGATCTAGAATGTTATTTGGATTTCTTTTGGAAAAAAACAACGATGCTTGTTTATATTATATCTCTGATTCCGAAACAAAAAATGCAGATATGTGCAAATTATCCTTACATGGATCAGCATTATGGAATCCTCTCAGCTTATGGACCTCAAATACCAGTACGTTTCCTTCCATGTTACCTTCTGTTTTCTCTTGTGTATTGATATTCTATGTGAATTGTCTTATATTCTTAAATACTATCCCACAAAATGAGTGAAGAGAACTAAAGCATAGAGTAGATAGATGCATAGAGTGAACTAAAGCATGGCAAAAAAAACAGAATGAGAAGTGGGAAACAATACAAAATAGCTAAAAAACCAAAATTGGTGCTAAGGAGATGACAGAATTAGGCATCTATGAAATAAATATTACCAAAAAATTAATAGGAACAAAACTTAAGTTTTCACGTAATGAAGTCTGGATGAGTACTTTTCTTGAACAGTATTTTTGTTGGTTGGATTTTGATATTCACTGTAAGCAATCTGGAAAGGTCAGTCTGCCTATCTATGAGTTGAAACTTGAATATTTGCAATATTCAGGGCCGGATTATGCTGCCAATGAGCTTAACATCGGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATACGTGCTAAGGCAATGATGGAGAATAAACTTGCCCGAACTCGTAAGGTATTAAGTCTTACTTGGGTCTCTCTCCTAGTACTTGATAGGTAGATTATTTTTTTTGGGATCTCGGATTTCGTAGAAGATGTAGGTGGATCAAAGGATGTGAATTGTTCCTTTCGGTATATTTCCTCACCAGTATAACCAGAACAAGAAGTCAACCTGATGCAGATGTCTGTCTAAACAGTAACTCTTGTTCAGTGTATTTGGAAGTTCTGTTTACCAACCTGGAATTTTCAATATCAACAATCGACTTGCATATGATACACTAGTCATTATCATGTTAATTTTGTAAACTTAACAAACAGTTATCCTTTTCTATTCCATAGTAACATCCTCCAGTCCAAATATTTGTCTGTCCTGTACAGAACACTACTTTATATGCAATAGTAACAAAGCAATTTGTCTTTCCGTATATTTCCTCACCAGTATTACTAGAACAAGAAGTCAACCTGAAGCAGATATCTGTCTAAAGAGTAACTCTCGTTCGGTTTTATGAATTCCTGTTTACTAACCTGAGGGTAATGTGAATATTTGATACCAGCAATCGGCTTGAATATGATACCAGTAAGCATCACGTTAATTCTGTAATCTGAACAAACTGTTGTTATGCTTTTATATGCCACAGTAACATCCTCTGGTCCAAATATTTTTCTTTGTCCTGTGCAGAAAACTATATATCCACATTACTCCTGCTGATATAGATTGCATATCTGTCTTACAGCCATATATGCACGAATCACGTCATCTTCATGCAATGCGCCGTCCACGGGGATCTGGTGGTCGTTTCCTGAACACAAAGAATCTGAAAAATGGGAAATCTTCAATGGAACCAAAGAAAATTGATGAGGTGAACCTTTCTGATTCAACTGGTTCTCAATGTTCTGTGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCCAAATGAAGCAAAAGGGAGGGGATTTAGTCTCTCGAGTTCTGAGGTATCGAGCCTATTCTCGAGGGGACTACAACGATTTCAAATCAACCATCTTGGACCATCAATCCCATCACTTGCAGAGATCATTGATGGAGGAGGACATGGCATGGTTCTACCCAAATGGGTTGCAGCAGCTGACAACTGCTGTGACCTTTGTGTTTGAAGGCGAAGGCAACGGGTTCTTGGTGCAAGTCATTGCACCAAAACCCTGTCTTTGTTGCGACCAAATCCAGCTTGCTGTCATGTTGTCAACGGCAATTGTCACAGGCTTCGCGATGAGGATAGTCCCCGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCTTATCAAAGTAGGTGTAGGATGTCTCTTATCTCTTTGTTTTGCTTCTCCTAAGTATGAGAGGTGGCTGAGAGAATCAAAGGAATCATCCAGTCAGATACGAAGTACGAAGTAATTGCAGTGCAATAGACAAAAAGGGTCTGTTCAAGAATAAGAGCATCAAGAGTACGAATTCTGCGCTGCGTTTATTTGTGACCATGAAAGTAGAACAAGAAGAATGTTCATTAAGTGTAGTGTTTGGTTATCCAAAATCAGACATTCTGAAGCAATTTGTACTGAACAAAGATGCTTGGCTTGTGGGTTTGTTTAAGGACAACTGTTCGTGTTTGTCTTTCAGTCTGTGTGTAATAAAAAATATGACTGTGATATCATCCGTATTGTTTCCATATTAGCACAATGCAACATTTCTCTTACTTGACCATGCTAATGCCTACATCCTCTCTTTTCATAAAAATAAGTTTGACATACTTTTCTTTGACTATGCATTCACAGCTTTAGATGATTCTCTTCATAAAATTAATTACTTGGTGAATAAAAAAAAATCATATATAGTTTCTAAAAGTGTTTAGATGGAATAAATAATGAAAACGAACTAAATAGTTGTAGATTCCATTAATAATACTTATAAAGTAAAAGAAAATACCTTTTTGAAAAATCTAATGTAGAGAGACAGTAGATGATTCGAATAGTTAATGTAGTAATTCAACCCCCTTATGGAGATTGAAATAATGAGGAAGAAGAAAGTGATTTGAATAGATTTAAGAAACGAGAACCTGGATTTTGAGCTTCTTCTTCATGGACTCATATACACAGTCGATTGGTGAAGAATGTTTGGGTTTAGCTTATGCCTTGGTTCAAAAACCGATTGATGTTAATCAGAAACAAAGAGGAAAATGAAATGTTGTTTGGATTTTGGTTTGAATCGCCCCAACGTTCAAATCTGAAACAAAGAGGGGCGAAGTTCGCCGGAAGAAGAAGAGGAAGGAGAGGTGGGGAGTGGGAAAAGATACCATCTCATCTTATCACGTGGCAGCACAT

mRNA sequence

ATGGCACCACAAACTGGGTGTTTGAAAGAACATGAACGAATTATTCCTAATTCACTTGGTCAGTTGTCACCTACTCCTGCTCGTTTATGGAGTGCTCTTGGGCAAGGTTCTCAATCAATCTTTGGAGATTTTGGTCAAGTGAAGGCTTCATCAATTCAACTTGGCAGTAATGGGAAGGAGTTCAATGGCACTAAACAAGTTGTTGCTCACGGCTTGGACAAACTGAACACAGCTCCATTTTCTATCTATCCTGGTGACTATAAGATTTCGATGGATGCACAAAAACCTTCACCAGTGTTTTCCCTGCAATCACCCCTGACAGAATATCACAATCGTTTTGAGCTCGGATTTGGCCAGCCCCTGATATGTGCAAATTATCCTTACATGGATCAGCATTATGGAATCCTCTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGCTTAACATCGGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATACGTGCTAAGGCAATGATGGAGAATAAACTTGCCCGAACTCGTAAGCCATATATGCACGAATCACGTCATCTTCATGCAATGCGCCGTCCACGGGGATCTGGTGGTCGTTTCCTGAACACAAAGAATCTGAAAAATGGGAAATCTTCAATGGAACCAAAGAAAATTGATGAGGTGAACCTTTCTGATTCAACTGGTTCTCAATGTTCTGTGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCCAAATGAAGCAAAAGGGAGGGGATTTAGTCTCTCGAGTTCTGAGGTATCGAGCCTATTCTCGAGGGGACTACAACGATTTCAAATCAACCATCTTGGACCATCAATCCCATCACTTGCAGAGATCATTGATGGAGGAGGACATGGCATGGTTCTACCCAAATGGGTTGCAGCAGCTGACAACTGCTGTGACCTTTGTGTTTGA

Coding sequence (CDS)

ATGGCACCACAAACTGGGTGTTTGAAAGAACATGAACGAATTATTCCTAATTCACTTGGTCAGTTGTCACCTACTCCTGCTCGTTTATGGAGTGCTCTTGGGCAAGGTTCTCAATCAATCTTTGGAGATTTTGGTCAAGTGAAGGCTTCATCAATTCAACTTGGCAGTAATGGGAAGGAGTTCAATGGCACTAAACAAGTTGTTGCTCACGGCTTGGACAAACTGAACACAGCTCCATTTTCTATCTATCCTGGTGACTATAAGATTTCGATGGATGCACAAAAACCTTCACCAGTGTTTTCCCTGCAATCACCCCTGACAGAATATCACAATCGTTTTGAGCTCGGATTTGGCCAGCCCCTGATATGTGCAAATTATCCTTACATGGATCAGCATTATGGAATCCTCTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGCTTAACATCGGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATACGTGCTAAGGCAATGATGGAGAATAAACTTGCCCGAACTCGTAAGCCATATATGCACGAATCACGTCATCTTCATGCAATGCGCCGTCCACGGGGATCTGGTGGTCGTTTCCTGAACACAAAGAATCTGAAAAATGGGAAATCTTCAATGGAACCAAAGAAAATTGATGAGGTGAACCTTTCTGATTCAACTGGTTCTCAATGTTCTGTGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCCAAATGAAGCAAAAGGGAGGGGATTTAGTCTCTCGAGTTCTGAGGTATCGAGCCTATTCTCGAGGGGACTACAACGATTTCAAATCAACCATCTTGGACCATCAATCCCATCACTTGCAGAGATCATTGATGGAGGAGGACATGGCATGGTTCTACCCAAATGGGTTGCAGCAGCTGACAACTGCTGTGACCTTTGTGTTTGA

Protein sequence

MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKEFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDSTGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEIIDGGGHGMVLPKWVAAADNCCDLCV*

Homology

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BLAST of CsaV3_3G038100 vs. NCBI nr
Match: XP_004136716.1 (nuclear transcription factor Y subunit A-10 [Cucumis sativus] >XP_031737692.1 nuclear transcription factor Y subunit A-10 [Cucumis sativus] >XP_031737693.1 nuclear transcription factor Y subunit A-10 [Cucumis sativus] >KGN59224.1 hypothetical protein Csa_002154 [Cucumis sativus])

HSP 1 Score: 659.1 bits (1699), Expect = 2.0e-185
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKE 60
           MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKE
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKE 60

Query: 61  FNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQP 120
           FNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQP
Sbjct: 61  FNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQP 120

Query: 121 LICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA 180
           LICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA
Sbjct: 121 LICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA 180

Query: 181 MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDST 240
           MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDST
Sbjct: 181 MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDST 240

Query: 241 GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEII 300
           GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEII
Sbjct: 241 GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEII 300

Query: 301 DGGGHGMVLPKWVAAADNCCDLCV 325
           DGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 DGGGHGMVLPKWVAAADNCCDLCV 324

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BLAST of CsaV3_3G038100 vs. NCBI nr
Match: XP_008442935.1 (PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442936.1 PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo])

HSP 1 Score: 643.3 bits (1658), Expect = 1.1e-180
Identity = 316/325 (97.23%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60
           MAPQTGCLKEHERIIPNSLGQLSP+PARLWSA GQG QSIFGDFGQVKASSI QLGSNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWSAFGQGPQSIFGDFGQVKASSIQQLGSNGK 60

Query: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120
           EFNGTKQVV+HGLDKLNTAPFSIYPGDYK+SMDAQKPSPVFSLQSPLTEYHNRFELGFGQ
Sbjct: 61  EFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           PLIC NYPYM+QHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEI 300
           TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSS+FSRGLQRFQINHLGPSIPSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325

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BLAST of CsaV3_3G038100 vs. NCBI nr
Match: XP_038906117.1 (nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_038906118.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_038906119.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida])

HSP 1 Score: 604.0 bits (1556), Expect = 7.7e-169
Identity = 300/325 (92.31%), Postives = 313/325 (96.31%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60
           MAPQTG LKEHE I+PNSLGQLS +PARLWSA GQGSQSIFGDFG VKASSI QLGSNGK
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQSIFGDFGHVKASSIEQLGSNGK 60

Query: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120
           EFNG+KQ VAHG +KLNTAPFSIYPGD KISMDAQKPSP+FSLQSPL+EYHNRFELGFGQ
Sbjct: 61  EFNGSKQ-VAHGPEKLNTAPFSIYPGDCKISMDAQKPSPMFSLQSPLSEYHNRFELGFGQ 120

Query: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           P+ICANYPYM+QHYGILSA+GPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PMICANYPYMEQHYGILSAFGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SME KKID+VNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMELKKIDDVNLSDS 240

Query: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEI 300
           TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSS+F RGLQRFQINHLGPS+PSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSIFPRGLQRFQINHLGPSMPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCC+LCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCNLCV 324

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BLAST of CsaV3_3G038100 vs. NCBI nr
Match: XP_022151376.1 (nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377.1 nuclear transcription factor Y subunit A-10 [Momordica charantia])

HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161
Identity = 286/328 (87.20%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60
           MAPQTG LKEHE I+PNSLGQLS +PARLWSA GQGSQ+IFGDFGQ+KASSI QLGSNGK
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGK 60

Query: 61  EFNGTK---QVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELG 120
           EF G K   QV  HGL+K+NTAPFSIYPGD K S+DAQKPSPVFSLQSPL+EYH RFELG
Sbjct: 61  EFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELG 120

Query: 121 FGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 180
           FGQP+ICANYPYM+QHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQI
Sbjct: 121 FGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQI 180

Query: 181 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNL 240
           RAKAMMEN+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK+D VNL
Sbjct: 181 RAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNL 240

Query: 241 SDSTGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSL 300
           S+STGSQCSVVLQSESGTLNSPNEAKGRGF+LSSSEV S+FSRGLQRFQI+HL PS+ SL
Sbjct: 241 SESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL 300

Query: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           AEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 328

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BLAST of CsaV3_3G038100 vs. NCBI nr
Match: XP_022934917.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita moschata])

HSP 1 Score: 577.4 bits (1487), Expect = 7.7e-161
Identity = 284/330 (86.06%), Postives = 304/330 (92.12%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI--QLGSNG 60
           MAPQTG LKEHE ++PNSLGQLS +PARLWS  GQG QS FGDFGQVKASS   QLGSNG
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSSSPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSNG 60

Query: 61  KEFNGTK---QVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFEL 120
           KEF GT+   QV AHG +KLNTAPFSIYPGD KIS+D QKPSP+FSLQSPL+EYHNRFEL
Sbjct: 61  KEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180
           GFGQP++CANYPYM+QHYGILSAY PQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRR+
Sbjct: 121 GFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRK 180

Query: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVN 240
           IRAKAMMEN+LA+TRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK+SMEPKKI+++N
Sbjct: 181 IRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKASMEPKKIEDIN 240

Query: 241 LSDSTG-SQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIP 300
           LSDSTG SQCSVVLQSESG LNSPN  KGRGFSLSSSEVSS FSRGLQRFQINH GPS+ 
Sbjct: 241 LSDSTGSSQCSVVLQSESGALNSPNGGKGRGFSLSSSEVSSTFSRGLQRFQINHFGPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

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BLAST of CsaV3_3G038100 vs. ExPASy Swiss-Prot
Match: Q8LFU0 (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 4.4e-42
Identity = 114/262 (43.51%), Postives = 143/262 (54.58%), Query Frame = 0


Query: 22  LSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKEFNGTKQVVAHG----LDK-LN 81
           LSP     W+A G           Q   +    G     F G K V        +DK  +
Sbjct: 7   LSPPQTPWWNAFG----------SQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTS 66

Query: 82  TAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQPLICANYPYMDQHYGIL 141
           T  F+  PG  K S D  KP   F++QS        FE GF QP++   +P+++Q+YG++
Sbjct: 67  TTLFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVV 126

Query: 142 SAYGPQ-IPGRIMLPMSL-TSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYM 201
           SAYG Q   GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    KL+R RKPYM
Sbjct: 127 SAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYM 186

Query: 202 HESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDSTGSQCSVVLQSESGT 261
           H SRHLHAMRRPRGSGGRFLNTK              D    S  + SQ S V   E+ T
Sbjct: 187 HHSRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENET 235

Query: 262 LNSPNEAKGRGFSLSSSEVSSL 277
           +NS  EA     +LS S V+S+
Sbjct: 247 INSSREANES--NLSDSAVTSM 235

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy Swiss-Prot
Match: Q9M9X4 (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-40
Identity = 134/329 (40.73%), Postives = 172/329 (52.28%), Query Frame = 0


Query: 20  GQLSPTPARLWSALGQ---GSQSIFGD---FGQVKASSIQLGSNGKEFNGTKQVVAHGLD 79
           G  S      W+A G      +S+ GD   F  VK  S+  G  G+  +       H   
Sbjct: 9   GLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSV--GETGQRVDKQSNSATH--- 68

Query: 80  KLNTAPFSIYPGDYKISMDAQKP-SPVFSLQSPLTEYHNRFELGFGQPLICANYPYMD-Q 139
                 FS+  GD K      KP    FS+QSP        ELGF QP I   YPY + Q
Sbjct: 69  ----LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQ 128

Query: 140 HYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA---MMENKL-A 199
           +YG++SAYG Q   R+MLP+++ ++D  IYVN+KQYHGIIRRRQ RAKA   + + KL +
Sbjct: 129 YYGVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSS 188

Query: 200 RTRKPYMHESRHLHAMRRPRGSGGRFLNTK---------NLKNGKSSMEPKKIDEVNLSD 259
           R RKPYMH SRHLHA+RRPRGSGGRFLNTK         N K G  SM+   I       
Sbjct: 189 RCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQ---IQSQPKPQ 248

Query: 260 STGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINH-LGPSIPSLA 319
            + SQ S V+  E+GT+N  N     G ++S SEV+S+          N+ L   + SL 
Sbjct: 249 QSNSQNSEVVHPENGTMNLSN-----GLNVSGSEVTSM----------NYFLSSPVHSLG 292

Query: 320 EIIDGGGHGMVLP-KWVAAA----DNCCD 322
                   GMV+P KW+AAA    + CC+
Sbjct: 309 --------GMVMPSKWIAAAAAMDNGCCN 292

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 8.4e-25
Identity = 70/165 (42.42%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 125 NYPYMDQHYG--ILSAYGPQ-----------IPGRIMLPMSLTSDDGPIYVNAKQYHGII 184
           ++ Y D HYG  + + Y PQ           IPGR+ LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 185 RRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKI 244
           RRRQ RAK   +NKL R RKPY+HESRH+HA++RPRGSGGRFLNTK L         ++ 
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQ 253

Query: 245 DEVNLSDSTGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSL 277
           ++    D  G Q +          +     K R  + S S+++S+
Sbjct: 254 EQ----DKLGQQVNRKTNMSRFEAHMLQNNKDRSSTTSGSDITSV 293

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy Swiss-Prot
Match: Q9LNP6 (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-23
Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 125 NYPYMDQHYGIL--SAYGPQIP------GRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 184
           ++ Y D H+G L  +AY PQ         R+ LP  L  ++ P++VNAKQ+H I+RRRQ 
Sbjct: 132 SFHYADPHFGGLMPAAYLPQATIWNPQMTRVPLPFDLIENE-PVFVNAKQFHAIMRRRQQ 191

Query: 185 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNL 244
           RAK   +NKL + RKPY+HESRH+HA++RPRGSGGRFLNTK L   + S +PK+   +  
Sbjct: 192 RAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKL---QESTDPKQDMPIQQ 251

Query: 245 SDSTGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLF 278
             +TG+    VL     + +       R    S+S+  +LF
Sbjct: 252 QHATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLF 288

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.9e-22
Identity = 61/142 (42.96%), Postives = 83/142 (58.45%), Query Frame = 0


Query: 117 FGQPLICANYPYMDQHY---------------GI-LSAYGPQIPGRIMLPMSLTSDDGPI 176
           + +P+    YPY D +Y               G+ L   G Q PG   +P+   + + P+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 177 YVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK 236
           +VNAKQYHGI+RRRQ RAK    N+  + +KPYMHESRHLHA+RRPRG GGRFLN K  +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK-E 163

Query: 237 NGKSSMEPKKIDEVNLSDSTGS 243
           NG    E +   + N S+++ S
Sbjct: 164 NGDHKEEEEATSDENTSEASSS 181

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy TrEMBL
Match: A0A0A0LE75 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=3 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 9.8e-186
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKE 60
           MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKE
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKE 60

Query: 61  FNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQP 120
           FNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQP
Sbjct: 61  FNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQP 120

Query: 121 LICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA 180
           LICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA
Sbjct: 121 LICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA 180

Query: 181 MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDST 240
           MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDST
Sbjct: 181 MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDST 240

Query: 241 GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEII 300
           GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEII
Sbjct: 241 GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEII 300

Query: 301 DGGGHGMVLPKWVAAADNCCDLCV 325
           DGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 DGGGHGMVLPKWVAAADNCCDLCV 324

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy TrEMBL
Match: A0A1S3B7N7 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 5.6e-181
Identity = 316/325 (97.23%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60
           MAPQTGCLKEHERIIPNSLGQLSP+PARLWSA GQG QSIFGDFGQVKASSI QLGSNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWSAFGQGPQSIFGDFGQVKASSIQQLGSNGK 60

Query: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120
           EFNGTKQVV+HGLDKLNTAPFSIYPGDYK+SMDAQKPSPVFSLQSPLTEYHNRFELGFGQ
Sbjct: 61  EFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           PLIC NYPYM+QHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEI 300
           TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSS+FSRGLQRFQINHLGPSIPSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy TrEMBL
Match: A0A6J1DDB6 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019330 PE=3 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 7.6e-162
Identity = 286/328 (87.20%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60
           MAPQTG LKEHE I+PNSLGQLS +PARLWSA GQGSQ+IFGDFGQ+KASSI QLGSNGK
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGK 60

Query: 61  EFNGTK---QVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELG 120
           EF G K   QV  HGL+K+NTAPFSIYPGD K S+DAQKPSPVFSLQSPL+EYH RFELG
Sbjct: 61  EFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELG 120

Query: 121 FGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 180
           FGQP+ICANYPYM+QHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQI
Sbjct: 121 FGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQI 180

Query: 181 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNL 240
           RAKAMMEN+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK+GK S+E KK+D VNL
Sbjct: 181 RAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNL 240

Query: 241 SDSTGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSL 300
           S+STGSQCSVVLQSESGTLNSPNEAKGRGF+LSSSEV S+FSRGLQRFQI+HL PS+ SL
Sbjct: 241 SESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL 300

Query: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           AEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 328

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy TrEMBL
Match: A0A6J1F452 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111441949 PE=3 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.7e-161
Identity = 284/330 (86.06%), Postives = 304/330 (92.12%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI--QLGSNG 60
           MAPQTG LKEHE ++PNSLGQLS +PARLWS  GQG QS FGDFGQVKASS   QLGSNG
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSSSPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSNG 60

Query: 61  KEFNGTK---QVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFEL 120
           KEF GT+   QV AHG +KLNTAPFSIYPGD KIS+D QKPSP+FSLQSPL+EYHNRFEL
Sbjct: 61  KEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180
           GFGQP++CANYPYM+QHYGILSAY PQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRR+
Sbjct: 121 GFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRK 180

Query: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVN 240
           IRAKAMMEN+LA+TRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK+SMEPKKI+++N
Sbjct: 181 IRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKASMEPKKIEDIN 240

Query: 241 LSDSTG-SQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIP 300
           LSDSTG SQCSVVLQSESG LNSPN  KGRGFSLSSSEVSS FSRGLQRFQINH GPS+ 
Sbjct: 241 LSDSTGSSQCSVVLQSESGALNSPNGGKGRGFSLSSSEVSSTFSRGLQRFQINHFGPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

[Close]

BLAST of CsaV3_3G038100 vs. ExPASy TrEMBL
Match: A0A6J1IY51 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111481693 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.9e-157
Identity = 280/330 (84.85%), Postives = 301/330 (91.21%), Query Frame = 0


Query: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI--QLGSNG 60
           MAPQTG LKEHE ++PNSLGQLS +PARLWS  GQG QS FGDFGQ+KASS   QLGSNG
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSSSPARLWSGYGQGCQSFFGDFGQLKASSTIQQLGSNG 60

Query: 61  KEFNGTK---QVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFEL 120
           KEF GT+   QV AHG +KLNTAPFSIYPGD KIS+D QKPSP+FSLQSPL+EYHNRFEL
Sbjct: 61  KEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180
           GFGQP++CANYPYM+QHYGILSAY PQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRR+
Sbjct: 121 GFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRK 180

Query: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVN 240
           IRAKAMMEN+LA+TRKPYMHESRHLHAMRRPRGSGGRFLNTK LKNGK+SMEPKKI+++N
Sbjct: 181 IRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKALKNGKASMEPKKIEDMN 240

Query: 241 LSDSTG-SQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIP 300
           LSDSTG SQCSVVLQSESG LNSPNE KGRGFSLSSSEVSS+FSRGLQRFQINHLGPS  
Sbjct: 241 LSDSTGSSQCSVVLQSESGALNSPNEGKGRGFSLSSSEVSSMFSRGLQRFQINHLGPSRQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           S  EIIDGG HGMVLPKWVAAADNC DLCV
Sbjct: 301 SQTEIIDGGEHGMVLPKWVAAADNCYDLCV 330

[Close]

BLAST of CsaV3_3G038100 vs. TAIR 10
Match: AT5G06510.1 (nuclear factor Y, subunit A10 )

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-43
Identity = 114/262 (43.51%), Postives = 143/262 (54.58%), Query Frame = 0


Query: 22  LSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKEFNGTKQVVAHG----LDK-LN 81
           LSP     W+A G           Q   +    G     F G K V        +DK  +
Sbjct: 7   LSPPQTPWWNAFG----------SQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTS 66

Query: 82  TAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQPLICANYPYMDQHYGIL 141
           T  F+  PG  K S D  KP   F++QS        FE GF QP++   +P+++Q+YG++
Sbjct: 67  TTLFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVV 126

Query: 142 SAYGPQ-IPGRIMLPMSL-TSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYM 201
           SAYG Q   GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    KL+R RKPYM
Sbjct: 127 SAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYM 186

Query: 202 HESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDSTGSQCSVVLQSESGT 261
           H SRHLHAMRRPRGSGGRFLNTK              D    S  + SQ S V   E+ T
Sbjct: 187 HHSRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENET 235

Query: 262 LNSPNEAKGRGFSLSSSEVSSL 277
           +NS  EA     +LS S V+S+
Sbjct: 247 INSSREANES--NLSDSAVTSM 235

[Close]

BLAST of CsaV3_3G038100 vs. TAIR 10
Match: AT5G06510.2 (nuclear factor Y, subunit A10 )

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-43
Identity = 114/262 (43.51%), Postives = 143/262 (54.58%), Query Frame = 0


Query: 22  LSPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGKEFNGTKQVVAHG----LDK-LN 81
           LSP     W+A G           Q   +    G     F G K V        +DK  +
Sbjct: 7   LSPPQTPWWNAFG----------SQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTS 66

Query: 82  TAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQPLICANYPYMDQHYGIL 141
           T  F+  PG  K S D  KP   F++QS        FE GF QP++   +P+++Q+YG++
Sbjct: 67  TTLFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVV 126

Query: 142 SAYGPQ-IPGRIMLPMSL-TSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYM 201
           SAYG Q   GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    KL+R RKPYM
Sbjct: 127 SAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYM 186

Query: 202 HESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDSTGSQCSVVLQSESGT 261
           H SRHLHAMRRPRGSGGRFLNTK              D    S  + SQ S V   E+ T
Sbjct: 187 HHSRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENET 235

Query: 262 LNSPNEAKGRGFSLSSSEVSSL 277
           +NS  EA     +LS S V+S+
Sbjct: 247 INSSREANES--NLSDSAVTSM 235

[Close]

BLAST of CsaV3_3G038100 vs. TAIR 10
Match: AT3G05690.1 (nuclear factor Y, subunit A2 )

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-41
Identity = 134/329 (40.73%), Postives = 172/329 (52.28%), Query Frame = 0


Query: 20  GQLSPTPARLWSALGQ---GSQSIFGD---FGQVKASSIQLGSNGKEFNGTKQVVAHGLD 79
           G  S      W+A G      +S+ GD   F  VK  S+  G  G+  +       H   
Sbjct: 9   GLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSV--GETGQRVDKQSNSATH--- 68

Query: 80  KLNTAPFSIYPGDYKISMDAQKP-SPVFSLQSPLTEYHNRFELGFGQPLICANYPYMD-Q 139
                 FS+  GD K      KP    FS+QSP        ELGF QP I   YPY + Q
Sbjct: 69  ----LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQ 128

Query: 140 HYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA---MMENKL-A 199
           +YG++SAYG Q   R+MLP+++ ++D  IYVN+KQYHGIIRRRQ RAKA   + + KL +
Sbjct: 129 YYGVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSS 188

Query: 200 RTRKPYMHESRHLHAMRRPRGSGGRFLNTK---------NLKNGKSSMEPKKIDEVNLSD 259
           R RKPYMH SRHLHA+RRPRGSGGRFLNTK         N K G  SM+   I       
Sbjct: 189 RCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQ---IQSQPKPQ 248

Query: 260 STGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINH-LGPSIPSLA 319
            + SQ S V+  E+GT+N  N     G ++S SEV+S+          N+ L   + SL 
Sbjct: 249 QSNSQNSEVVHPENGTMNLSN-----GLNVSGSEVTSM----------NYFLSSPVHSLG 292

Query: 320 EIIDGGGHGMVLP-KWVAAA----DNCCD 322
                   GMV+P KW+AAA    + CC+
Sbjct: 309 --------GMVMPSKWIAAAAAMDNGCCN 292

[Close]

BLAST of CsaV3_3G038100 vs. TAIR 10
Match: AT5G06510.3 (nuclear factor Y, subunit A10 )

HSP 1 Score: 162.5 bits (410), Expect = 5.5e-40
Identity = 97/194 (50.00%), Postives = 121/194 (62.37%), Query Frame = 0


Query: 85  GDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQPLICANYPYMDQHYGILSAYGPQ-I 144
           G  K S D  KP   F++QS        FE GF QP++   +P+++Q+YG++SAYG Q  
Sbjct: 16  GGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRS 75

Query: 145 PGRIMLPMSL-TSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHA 204
            GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    KL+R RKPYMH SRHLHA
Sbjct: 76  SGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHA 135

Query: 205 MRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDSTGSQCSVVLQSESGTLNSPNEAK 264
           MRRPRGSGGRFLNTK              D    S  + SQ S V   E+ T+NS  EA 
Sbjct: 136 MRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETINSSREAN 186

Query: 265 GRGFSLSSSEVSSL 277
               +LS S V+S+
Sbjct: 196 ES--NLSDSAVTSM 186

[Close]

BLAST of CsaV3_3G038100 vs. TAIR 10
Match: AT1G72830.1 (nuclear factor Y, subunit A3 )

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-26
Identity = 70/165 (42.42%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 125 NYPYMDQHYG--ILSAYGPQ-----------IPGRIMLPMSLTSDDGPIYVNAKQYHGII 184
           ++ Y D HYG  + + Y PQ           IPGR+ LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 185 RRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKI 244
           RRRQ RAK   +NKL R RKPY+HESRH+HA++RPRGSGGRFLNTK L         ++ 
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQ 253

Query: 245 DEVNLSDSTGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSL 277
           ++    D  G Q +          +     K R  + S S+++S+
Sbjct: 254 EQ----DKLGQQVNRKTNMSRFEAHMLQNNKDRSSTTSGSDITSV 293

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136716.1	2.0e-185	100.00	nuclear transcription factor Y subunit A-10 [Cucumis sativus] >XP_031737692.1 nu...	[more]
XP_008442935.1	1.1e-180	97.23	PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442...	[more]
XP_038906117.1	7.7e-169	92.31	nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_0389061...	[more]
XP_022151376.1	1.6e-161	87.20	nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377....	[more]
XP_022934917.1	7.7e-161	86.06	nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]	[more]

BLAST of CsaV3_3G038100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFU0	4.4e-42	43.51	Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
Q9M9X4	1.9e-40	40.73	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	8.4e-25	42.42	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LNP6	2.7e-23	42.24	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	3.9e-22	42.96	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CsaV3_3G038100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE75	9.8e-186	100.00	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G78271...	[more]
A0A1S3B7N7	5.6e-181	97.23	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 P...	[more]
A0A6J1DDB6	7.6e-162	87.20	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1F452	3.7e-161	86.06	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IY51	1.9e-157	84.85	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114816...	[more]

BLAST of CsaV3_3G038100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06510.1	3.1e-43	43.51	nuclear factor Y, subunit A10	[more]
AT5G06510.2	3.1e-43	43.51	nuclear factor Y, subunit A10	[more]
AT3G05690.1	1.3e-41	40.73	nuclear factor Y, subunit A2	[more]
AT5G06510.3	5.5e-40	50.00	nuclear factor Y, subunit A10	[more]
AT1G72830.1	5.9e-26	42.42	nuclear factor Y, subunit A3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 190..213 score: 80.32 coord: 159..181 score: 68.84
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 155..216 e-value: 1.7E-34 score: 130.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 159..213 e-value: 8.9E-26 score: 90.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 4..322
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 156..216 score: 35.928066
None	No IPR available	GENE3D	6.10.250.2430		coord: 157..217 e-value: 4.7E-30 score: 105.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..225
None	No IPR available	PANTHER	PTHR12632:SF39	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-10	coord: 4..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038100.1	CsaV3_3G038100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity