
CsaV3_3G037820 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACGCTCTATATGGTGTCTTCTAATATCCGTCATTATTGCGTTCGCTATATCTTTTGGGGGGTCTTTATTGATCTTATGGCTTATTTTCATAACCAACAAGATCAAATTCGATGTAACCGATGCCATTCTTACTCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTCGGTGTTTTCTTCACCATTAGAAACCCTAATAAGCAAATAGGAATCTACTATGACACCATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCGAGGACTACAAGCTTACTTAAAGGACGATTTCAAGGGCAGCGGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGAGGTCAAATTTCGTCTTTCGTGGAGGTTGAAATTAGGGCTTTATAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTAACTTCTAGTGGAACTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGATTCTTTCAAAGAAATTTGTGTTATGTACTCAATTATCATTTGTATTTGATTGAGTTTTTCTGGTTTGGATCTTGTAATTTGTTAGAGAACTTCAATGCATCTTTCTGGAAATTGAATATTTAATTGCGAAATGAAATGTCCAAATCATACACATTGGGTAGATCAGGTCGAGACAAGAAGGAAATTGTAACCTACCCACCCACTACTATATTTTGTCATCCCTTAATGAATTTCATAACATTAATAGTTTCCATAGTTCAATTAATTAATATGACACAAATTTCCTCAAATAATTAACATCAACAATAACAATGGAACAGTTTTTTTGGTAAAGTCTACTAATAATATATTTTGGGAAGTTAGAAATTTTAATGGCCCCAAATGAAATTATCCTTCATTTTCATTTGCAATACTATTCATTAATTCACCACATATATGTTTTTTGTGCTTTTTTAACTAAGGTCGAAATGAAACGGACCACGAGCTTCCTTAGAGCCAATTAGAACATGCACTTCTATAGATAATACAAACTCTTTATATAAATAATATTAATTAATGCCTCACTTCTTTAAAACTAAACTTCTTTTAGCCTTTTTCTTTTCCATTCTTTTTCCTTTTCAAAAAAATAGGAGAAGAGGATTTTAACATCTAGCCCTTTTTTTTTCAACGTAGGGATATAATTTTTTGCCTCTTGATCAAGAAATATTCACTGTTGTTCATATTGGTGACTAAATTTTATTGTTTAGATTAAGAAATCAGTCATTGAGAAGTGGGACAAAATTTAACCATTCTTTTCTAAATTAACTTGTTTTTACCAAACAAAAATACATTAATTTATATTAGAGAATTTTTAAAAATAATAATAATAAATCATACACTGTTGAAAAAAATTATCAAGAGACAAAAGTGCATTATATTTTATTTTTCTCTCTAAAGGTAAATATTTTTGTCAATTTTACTCTTTTTTAAAAAAAAGGTCTTTATAATTATTGTTGTAACTGAATAGGAATTTTTTTGATCGATAATACATATAATCTCTAATTGCTATTAATGTGTTTATCTCTAGTTAAAATTTTCTAGTGCTACCAATCAACTTTACATATGAAAGGATATAACTAAGAAATGTTTTTCTTTTATTTTTTTATTTTTTTGAAGTGCGTTTTCATACTAATTAAACCAACCTCAACCCAAGGTGTCCAAAGTTCTCCACATAGTTGGATACATGACAAGTAGTTATCTCTAACATGTCAACGTATATATTCTTAATTTCATAGTACAAATGCCCCTAGTTTAATAAATATAATAGCTTTTACTTAATCAAAATCACTTTTTTATTCAATCTGTATGGGAATTTAATATTTTTAAGCACCTCAATGAGCTGGTGTCTCAAAAAGTCAACCACAAGCAAGATTTGATCAACAAACACAAATAAAAAAAAAAAAAAAATTCATTTTCCTCTCTATATGTATACATTCCTCCTCCAATCCAACAGCATCCCCAACGAAATACTCTCCCTTCACCATATGAGCATGGCAAGTTTATGGTGTCTTTTAATATCTGTTATTGTTGCTTTTGGTGTATCTTTTGGGTTCACAGTATTGATCTTATGGCTTGTTTTCATAACCCACAAGATCAAATTCAACGTAACAGATGCAACTCTAACCCAATTCAACTTCACCAACAATGACACACAGCTCCAATACAATCTTGGCATTTACTTCACCATTAGAAACCCTAATGAGCGTGTTGGAATATATTATGACACCATTGAAGCAACTGCAATGTATAAAGATCAAAACTTCGACACAAGATTGCTAACTCCATTTTACCAAACCCCAAAGACAACAAGCTTACTTAGAGGACGATTTGAAGGGCAACGGGCTGTGGTAATTGGCAACAACAAAGTTTCTGAATTGAATTCTGAGAAACTTGCTGGAGTTTATTCAATTGATGTCAAATTTCGTCTTTCGTTGAGGTTGAAATTCGGGATTTATAAAATTATTAGAGTTAGGCCTAAAGTGGAATGTGGATTCCAAGTTCCATTGAATTTTACTGGAACTTCTTCTTTTCCTTGGTTTCAAGATGCTATTGGTTGTCATGTCGATTATTGATTTTTAATTATCTATTTTTGAGTTATGAGTACTCAATTATATTTAAATATTCTTTGCTTTTTTTATATTTTGTTAGAGTTATTCATTGCATCTTGATTGAATTTTGATCATAAAATGTTAATTTATAGTTTTCTCTATAGTTGTCAAATATTTACGTAATAATTAAGATAACATTTTGTTAGATTTGGCCAAACCACCACATAATTGAAATGAAAACCTTACAAAACCACTGTTGAGTATAGGAACGAAATGATCACATCTGAATAAAGACTCGGCTAAAAACACATGACCATATGAAATTATGAAATTAAAATATTTATATTTATATTTATGTACAAATAAACGAGAGCAATTGGACATTAGGGTGAATCATTGTGTAACATAAAAGTGGTATTTCTTAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAATAAATGGGAGTTAAAATGATTAAATATAAAGAACCTTATATTGTAGAATATTCAAGAAACGTTCCCACGGAAATCTTCATATATGGGCCAATGTTTGGGCCGAAACATTAACAGGGTCCAGGAACAGATATATTGGTTGAAAACCGCCACGGTAGGAGAGGAAAAAGCAACGGTCAGCTACACCTCCCCGCACTAG ATGGCACGCTCTATATGGTGTCTTCTAATATCCGTCATTATTGCGTTCGCTATATCTTTTGGGGGGTCTTTATTGATCTTATGGCTTATTTTCATAACCAACAAGATCAAATTCGATGTAACCGATGCCATTCTTACTCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTCGGTGTTTTCTTCACCATTAGAAACCCTAATAAGCAAATAGGAATCTACTATGACACCATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCGAGGACTACAAGCTTACTTAAAGGACGATTTCAAGGGCAGCGGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGAGGTCAAATTTCGTCTTTCGTGGAGGTTGAAATTAGGGCTTTATAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTAACTTCTAGTGGAACTTCTTCTTTTCAGAATGCTATTGTATTGATCTTATGGCTTGTTTTCATAACCCACAAGATCAAATTCAACGTAACAGATGCAACTCTAACCCAATTCAACTTCACCAACAATGACACACAGCTCCAATACAATCTTGGCATTTACTTCACCATTAGAAACCCTAATGAGCGTGTTGGAATATATTATGACACCATTGAAGCAACTGCAATGTATAAAGATCAAAACTTCGACACAAGATTGCTAACTCCATTTTACCAAACCCCAAAGACAACAAGCTTACTTAGAGGACGATTTGAAGGGCAACGGGCTGTGGTAATTGGCAACAACAAAGTTTCTGAATTGAATTCTGAGAAACTTGCTGGAGTTTATTCAATTGATGTCAAATTTCGTCTTTCGTTGAGGTTGAAATTCGGGATTTATAAAATTATTAGAGTTAGGCCTAAAGTGGAATGTGGATTCCAAGTTCCATTGAATTTTACTGGAACTTCTTCTTTTCCTTGGTTTCAAGATGCTATTGGTTGTCATAATATTCAAGAAACGTTCCCACGGAAATCTTCATATATGGGCCAATGTTTGGGCCGAAACATTAACAGGGTCCAGGAACAGATATATTGGTTGAAAACCGCCACGGTAGGAGAGGAAAAAGCAACGGTCAGCTACACCTCCCCGCACTAG ATGGCACGCTCTATATGGTGTCTTCTAATATCCGTCATTATTGCGTTCGCTATATCTTTTGGGGGGTCTTTATTGATCTTATGGCTTATTTTCATAACCAACAAGATCAAATTCGATGTAACCGATGCCATTCTTACTCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTCGGTGTTTTCTTCACCATTAGAAACCCTAATAAGCAAATAGGAATCTACTATGACACCATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCGAGGACTACAAGCTTACTTAAAGGACGATTTCAAGGGCAGCGGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGAGGTCAAATTTCGTCTTTCGTGGAGGTTGAAATTAGGGCTTTATAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTAACTTCTAGTGGAACTTCTTCTTTTCAGAATGCTATTGTATTGATCTTATGGCTTGTTTTCATAACCCACAAGATCAAATTCAACGTAACAGATGCAACTCTAACCCAATTCAACTTCACCAACAATGACACACAGCTCCAATACAATCTTGGCATTTACTTCACCATTAGAAACCCTAATGAGCGTGTTGGAATATATTATGACACCATTGAAGCAACTGCAATGTATAAAGATCAAAACTTCGACACAAGATTGCTAACTCCATTTTACCAAACCCCAAAGACAACAAGCTTACTTAGAGGACGATTTGAAGGGCAACGGGCTGTGGTAATTGGCAACAACAAAGTTTCTGAATTGAATTCTGAGAAACTTGCTGGAGTTTATTCAATTGATGTCAAATTTCGTCTTTCGTTGAGGTTGAAATTCGGGATTTATAAAATTATTAGAGTTAGGCCTAAAGTGGAATGTGGATTCCAAGTTCCATTGAATTTTACTGGAACTTCTTCTTTTCCTTGGTTTCAAGATGCTATTGGTTGTCATAATATTCAAGAAACGTTCCCACGGAAATCTTCATATATGGGCCAATGTTTGGGCCGAAACATTAACAGGGTCCAGGAACAGATATATTGGTTGAAAACCGCCACGGTAGGAGAGGAAAAAGCAACGGTCAGCTACACCTCCCCGCACTAG MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQNAIVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIGNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWFQDAIGCHNIQETFPRKSSYMGQCLGRNINRVQEQIYWLKTATVGEEKATVSYTSPH* Homology
BLAST of CsaV3_3G037820 vs. NCBI nr
Match: KAE8651105.1 (hypothetical protein Csa_001204 [Cucumis sativus]) HSP 1 Score: 805.1 bits (2078), Expect = 2.8e-229 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. NCBI nr
Match: XP_004136710.2 (uncharacterized protein LOC101218041 [Cucumis sativus]) HSP 1 Score: 364.0 bits (933), Expect = 1.7e-96 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. NCBI nr
Match: KAG7017492.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 359.4 bits (921), Expect = 4.1e-95 Identity = 195/370 (52.70%), Postives = 253/370 (68.38%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. NCBI nr
Match: XP_004136708.1 (NDR1/HIN1-like protein 10 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 3.0e-90 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. NCBI nr
Match: XP_008443591.1 (PREDICTED: protein YLS9-like [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 1.6e-86 Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.1e-37 Identity = 87/175 (49.71%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.7e-30 Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.4e-29 Identity = 70/176 (39.77%), Postives = 112/176 (63.64%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18 Identity = 56/162 (34.57%), Postives = 91/162 (56.17%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.2e-10 Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy TrEMBL
Match: A0A0A0LEQ7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 8.1e-97 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy TrEMBL
Match: A0A0A0LGS2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy TrEMBL
Match: A0A1S3B955 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 7.6e-87 Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy TrEMBL
Match: A0A5A7TR00 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001580 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 2.4e-85 Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. ExPASy TrEMBL
Match: A0A1S3B970 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 2.4e-85 Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 159.1 bits (401), Expect = 7.6e-39 Identity = 87/175 (49.71%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 ) HSP 1 Score: 135.2 bits (339), Expect = 1.2e-31 Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 132.1 bits (331), Expect = 9.9e-31 Identity = 70/176 (39.77%), Postives = 112/176 (63.64%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 129.8 bits (325), Expect = 4.9e-30 Identity = 68/176 (38.64%), Postives = 101/176 (57.39%), Query Frame = 0
BLAST of CsaV3_3G037820 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative ) HSP 1 Score: 95.1 bits (235), Expect = 1.3e-19 Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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