CsaV3_3G037230 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G037230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	F-box/LRR-repeat protein
Location	chr3: 30800508 .. 30803230 (-)
RNA-Seq Expression	CsaV3_3G037230
Synteny	CsaV3_3G037230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGGATTGCACAATATAGAAAATATACGAGAAAAGATAATCCAAAGTGTGTCTTTAGCTCACAAAAGATAAATAATGAGTACCCAAAAAAAAAACTCGAGATAAAAACAAACACCAAATCGAAGCAATTTAGTTACGGAAAGCTCTATGCGAGTATGAAACGGAAGAAAACTGGAATGAAACCAATGTGAGCTACACATTTATCAGAATAATGCAAGCCTCCTTGACAATAACAGAATGCAAGAAATTGAGAAATGCAACTGAATTCAAGATAAGTGTACCAGAGAAAAGTGCAGAATATGAAGCATTTGAGTTGGAGTTGGAGTGTGAAATGGAAATGATGGAGGAGTGACTGTTGGTAGCTTAGATTCTTTGCGCCATTATGAGAAAATCTTGAGGAAAGGCAACAAAACCCATGTGAACAAGAAGGTAGAAGAATTGACCACTAGCTTTTGGGAGGAAGGCGATTTGTGGGTATACAGTGCTAAAAAAGCAGAAATGGATTGAGGAAAAGTGTCCTATTAACCAACCAAGAGATTTTGACTCACATTTGGGCTAAGTATTTCAAGGCCCGAATTTTGAGTCCGCCTAACGATGACCCGGAATGTTGGATGATTTTTCACTTAAAATTAATTACTAAAATATATTACTTTTGCTCAATCTCGGTCTCGGTCACTCTTCCTCTCCTTCAGTCTCAATTTTGGTCTCTATTGCTCAAACCTCACCGAAGTTGGTCCAAAGGGAGCTTCTTGCACCGAAGAAGACGCCGGCGAAAAAGAAGAAGCAAAGGAAGAAAAAAGTGAGGGAGAAACCACAGTAGAAAAAGGAAAAAAGCAAAAAGCAATACTATAGCTTCATGTGGGGTTTGTACATAAAAGGATATTAAAATAAGGCGTATGTTACATTAATGTCTTAAGTTTTCATTTCTTTTACAAAGAAAAGCTTACTGAATTTCAATTTTTTTTATTAATGTTAGTGACTGAATTTTTGGTTTGACAATTCATTACGTAAAATAAGAAAAATTTGATGTTTTGATTATTTCTCCCTCCTCCACAATCTTATGATTTGTCCATTGATTGATAGGTGGTTGCAAACAGCTTCTATTCTCCGTTCATCTGTGGCTGTGGCTGTGGCTTTCATCTTCTTTCTTGGAGATTCCTTTCCCACTTCGCGTTATCAGTTCGATTCCTCCAACAGTGGCTTCAAATTCTCTTCAAAATCATTCTCATTCTTGCATTGAGGTAAGTTGTGCAGATTTTTTGCTCTTCGTTGAACTTATCTTGTTAATTCTTGTAGGTACCTCAATTCTTCAACTGATACAGTTTAAATCTTCTCTGCAGTACTCTACTGCCCCTTCTTTTGATCGTTTGTGTTGATCATTCCTATTGTTTTACTCTGGATTTTCCTGTGGTGAATTCAGAGTTTGATTTGTTGCTTACTTCCTAATATTTCATGGGTAAGTTTTTATGAGGGAAGTTCTTTGATTTTTCCTAAATTGGGGTAATATCCAGCTCACAGAGTCTTCATTTTCTCTTGCTGTAACTGGACATGGAACACTTACCAGTTGAAGTTATTGGAAACATACTTTCTCATCTAAAATCTGCTAGAGATGCGGTGATTGCTTCGGTTACTTATAAGAAATGGAGATAGGCTTGGCGGAATCACCTCCATTCTTTGACCTTCAACTCGAATGTTTGGCCTTATCCTGATGAAATTTCAACGTGAACCTTGGAAGTTATTATAACACAAACAATACCTCAGACCACTGGACTTCAGAACTTGTCCATTTTCATGGATGATGATGTAGATGCATTCTTCTCGTTGATTTCTTGGCTCATGTGTACGAGAGACACAATCTGTTGACTTCACTATAATGTGAAGACTATTCCAAGTATCAATGTAATTGATAAGTGTGGTGGACAAAAACTGGAAAGGCTAATAATTCGATAAGCGGCATTGAACCGACGTATCATAAGTTCTCTTGCTTGAAATATCTATCTCTCAGTAATATCATCATATCTGCAACCTTCTTCTTGCAGTTTGTCTCAAGCTTGAAAAGTTCGCTCTAATTAACCCAGAACTTGTGATGTCAGATACGCAGACAGCAATGGAACATAGCAGTTCTCCATTGAAGGATATCTTTGTTGGAAACCTCGGTTTATAGAAGTTCACTCTAGAGCTTGATACCCTTGAAATTTTACATTTAAAAGAATGTGCTATACATATTTTTGAGCTCATTGGAAAAGCAACTCTAATGAGTCTTGAAGATAGACGATTTTAGTGGTTTCCAACTGAACGTAGGCAAGAACATATGAAATTATGGACGTCTGCAGTTTTGCTTCGGATGTGAGGTGCAGCATGTGATTATAGTGATGAAGATGTGGATTTGTACTCAATTTCCATCTCTTTCTCCAAGTTAAGCTATTTATCTTTGCATTATTATCCAAGGCATGGAACCTTTCATCATAACTTTCGGGAATCCTTTCAGATGGAGAATGTGACCATACTAGAACTTGGATGGAGCGACACTAGCGATCCCTTCTCTAACTGGGTGGCTAAACTTCTTGAAAAATGCCCTAAGTTGAAGAAATTGATAATTTGTGGGGCTGTATCAGAGATTAATAACCACGAGGAATGCCAAAACTTAGCTCACTTCATCACATATTTCGTTGAACTTATGAGAAAATATCTGCATATTGAGGTCCAGTTTGGTTTCGAATAG

mRNA sequence

ATGCAAGCCTCCTTGACAATAACAGAATGCAAGAAATTGAGAAATGCAACTGAATTCAAGATAAGTGTACCAGAGAAAAGTGCAGAATATGAAGCATTTGAGTTGGAGTTGGAGTGTGGTTGCAAACAGCTTCTATTCTCCGTTCATCTGTGGCTGTGGCTGTGGCTTTCATCTTCTTTCTTGGAGATTCCTTTCCCACTTCGCGTTATCAGTTCGATTCCTCCAACAGTGGCTTCAAATTCTCTTCAAAATCATTCTCATTCTTGCATTGAGACCACTGGACTTCAGAACTTGTCCATTTTCATGGATGATGATGTAGATGCATTCTTCTCGTTGATTTCTTGGCTCATGTTTTGTCTCAAGCTTGAAAAGTTCGCTCTAATTAACCCAGAACTTGTGATGTCAGATACGCAGACAGCAATGGAACATAGCAGTTCTCCATTGAAGGATATCTTTGTTGGAAACCTCGCATGTGATTATAGTGATGAAGATGTGGATTTGTACTCAATTTCCATCTCTTTCTCCAAGTTAAGCTATTTATCTTTGCATTATTATCCAAGGCATGGAACCTTTCATCATAACTTTCGGGAATCCTTTCAGATGGAGAATGTGACCATACTAGAACTTGGATGGAGCGACACTAGCGATCCCTTCTCTAACTGGGTGGCTAAACTTCTTGAAAAATGCCCTAAGTTGAAGAAATTGATAATTTGTGGGGCTGTATCAGAGATTAATAACCACGAGGAATGCCAAAACTTAGCTCACTTCATCACATATTTCGTTGAACTTATGAGAAAATATCTGCATATTGAGGTCCAGTTTGGTTTCGAATAG

Coding sequence (CDS)

ATGCAAGCCTCCTTGACAATAACAGAATGCAAGAAATTGAGAAATGCAACTGAATTCAAGATAAGTGTACCAGAGAAAAGTGCAGAATATGAAGCATTTGAGTTGGAGTTGGAGTGTGGTTGCAAACAGCTTCTATTCTCCGTTCATCTGTGGCTGTGGCTGTGGCTTTCATCTTCTTTCTTGGAGATTCCTTTCCCACTTCGCGTTATCAGTTCGATTCCTCCAACAGTGGCTTCAAATTCTCTTCAAAATCATTCTCATTCTTGCATTGAGACCACTGGACTTCAGAACTTGTCCATTTTCATGGATGATGATGTAGATGCATTCTTCTCGTTGATTTCTTGGCTCATGTTTTGTCTCAAGCTTGAAAAGTTCGCTCTAATTAACCCAGAACTTGTGATGTCAGATACGCAGACAGCAATGGAACATAGCAGTTCTCCATTGAAGGATATCTTTGTTGGAAACCTCGCATGTGATTATAGTGATGAAGATGTGGATTTGTACTCAATTTCCATCTCTTTCTCCAAGTTAAGCTATTTATCTTTGCATTATTATCCAAGGCATGGAACCTTTCATCATAACTTTCGGGAATCCTTTCAGATGGAGAATGTGACCATACTAGAACTTGGATGGAGCGACACTAGCGATCCCTTCTCTAACTGGGTGGCTAAACTTCTTGAAAAATGCCCTAAGTTGAAGAAATTGATAATTTGTGGGGCTGTATCAGAGATTAATAACCACGAGGAATGCCAAAACTTAGCTCACTTCATCACATATTTCGTTGAACTTATGAGAAAATATCTGCATATTGAGGTCCAGTTTGGTTTCGAATAG

Protein sequence

MQASLTITECKKLRNATEFKISVPEKSAEYEAFELELECGCKQLLFSVHLWLWLWLSSSFLEIPFPLRVISSIPPTVASNSLQNHSHSCIETTGLQNLSIFMDDDVDAFFSLISWLMFCLKLEKFALINPELVMSDTQTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELMRKYLHIEVQFGFE*

Homology

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BLAST of CsaV3_3G037230 vs. NCBI nr
Match: KAE8651088.1 (hypothetical protein Csa_002699 [Cucumis sativus])

HSP 1 Score: 563.5 bits (1451), Expect = 9.9e-157
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MQASLTITECKKLRNATEFKISVPEKSAEYEAFELELECGCKQLLFSVHLWLWLWLSSSF 60
           MQASLTITECKKLRNATEFKISVPEKSAEYEAFELELECGCKQLLFSVHLWLWLWLSSSF
Sbjct: 1   MQASLTITECKKLRNATEFKISVPEKSAEYEAFELELECGCKQLLFSVHLWLWLWLSSSF 60

Query: 61  LEIPFPLRVISSIPPTVASNSLQNHSHSCIETTGLQNLSIFMDDDVDAFFSLISWLMFCL 120
           LEIPFPLRVISSIPPTVASNSLQNHSHSCIETTGLQNLSIFMDDDVDAFFSLISWLMFCL
Sbjct: 61  LEIPFPLRVISSIPPTVASNSLQNHSHSCIETTGLQNLSIFMDDDVDAFFSLISWLMFCL 120

Query: 121 KLEKFALINPELVMSDTQTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYL 180
           KLEKFALINPELVMSDTQTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYL
Sbjct: 121 KLEKFALINPELVMSDTQTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYL 180

Query: 181 SLHYYPRHGTFHHNFRESFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGA 240
           SLHYYPRHGTFHHNFRESFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGA
Sbjct: 181 SLHYYPRHGTFHHNFRESFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGA 240

Query: 241 VSEINNHEECQNLAHFITYFVELMRKYLHIEVQFGFE 278
           VSEINNHEECQNLAHFITYFVELMRKYLHIEVQFGFE
Sbjct: 241 VSEINNHEECQNLAHFITYFVELMRKYLHIEVQFGFE 277

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BLAST of CsaV3_3G037230 vs. NCBI nr
Match: XP_022144792.1 (F-box/LRR-repeat protein At1g67190-like [Momordica charantia] >XP_022144793.1 F-box/LRR-repeat protein At1g67190-like [Momordica charantia] >XP_022144794.1 F-box/LRR-repeat protein At1g67190-like [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-37
Identity = 129/369 (34.96%), Postives = 155/369 (42.01%), Query Frame = 0


Query: 73  IPPTVASNSLQ-NHSHSCIETTGLQNLSIFMDD-DVDAFFSLISWLMF------------ 132
           IP  +++++L+   + + ++TTGLQNLS+FMDD D  +  S+I+WLM+            
Sbjct: 52  IPHDLSTSTLEIIITQTILQTTGLQNLSVFMDDFDAFSASSVIAWLMYTRDTLCRLHYNV 111

Query: 133 ------------------------------------------------------------ 192
                                                                       
Sbjct: 112 ETTPSVNIIEKCGRQKLETLELANNSITGVEPTYQKFPCLKSLSLSDIGISALDLNLLLT 171

Query: 193 -CLKLEKFALINPELVMSDTQTAMEHSSSPLKDIFVGNLACDY----------------- 252
            C KLEK ALINPE+VMSD Q  +E SSS LKD+FV  L+ D                  
Sbjct: 172 ACPKLEKLALINPEVVMSDAQPTIELSSSSLKDVFVEGLSLDKFTLQADILEILHLRDCI 231

Query: 253 ------------------------------------------------------------ 278
                                                                       
Sbjct: 232 LDFFELIGKGALRVLKIDDASVIHLDIGENTENLEIVDVCNFTIMWPKFYHTISKASMLK 291

[Close]

BLAST of CsaV3_3G037230 vs. NCBI nr
Match: KAG4191679.1 (hypothetical protein ERO13_A07G110300v2 [Gossypium hirsutum] >KAG4191680.1 hypothetical protein ERO13_A07G110300v2 [Gossypium hirsutum])

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-30
Identity = 83/197 (42.13%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 86  SHSCIETTGLQNLSIFMD--DDVDAFFSLISWLMFCLK---LEKFALINPELVMSDTQTA 145
           + +  +TTGLQ LSI MD  DDV      I   +  L+   +  F +I P+         
Sbjct: 66  TQTIFQTTGLQGLSILMDDIDDVSVIHLDIGETIDNLEVVDVSNFTIIWPKFYQ------ 125

Query: 146 MEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQ 205
           M   SS L+ + + ++A D  DE VDL +I++ F +L +L+L Y  R G  H+  + S  
Sbjct: 126 MISRSSKLRKLRLWDVAFDDEDEVVDLETIAVCFPQLKHLALSYELRDGVMHYGLQGSSN 185

Query: 206 MENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYF 265
           +ENV +LELGW+  +D FS+WV +LL++CP L+K+II G+VSE+ +HEECQ LA+F +  
Sbjct: 186 LENVMVLELGWTVINDLFSHWVEELLKRCPNLRKMIIFGSVSEVKSHEECQILANFTSSI 245

Query: 266 VELMRKYLHIEVQFGFE 278
           V+LMRKY+++EV F FE
Sbjct: 246 VQLMRKYMNVEVHFEFE 256

[Close]

BLAST of CsaV3_3G037230 vs. NCBI nr
Match: KAG5584079.1 (hypothetical protein H5410_044513 [Solanum commersonii])

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-30
Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 145 SSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENV 204
           SS LK + +  +  D  DE VD+ +IS  F +LS+LSL Y PR    H+  ++SF++ENV
Sbjct: 287 SSKLKRLRLWGVVFDDEDEAVDIETISACFPQLSHLSLSYEPRETALHYGSQDSFKLENV 346

Query: 205 TILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELM 264
            +LELGW    D FS+WVA LLE+CP L+KL+I G VSE   HEEC  LA+F ++ V LM
Sbjct: 347 VVLELGWMVIGDLFSHWVAGLLERCPNLRKLVIYGVVSETKTHEECHTLANFTSFIVRLM 406

Query: 265 RKYLHIEVQFGFE 278
           RKYLH++VQF +E
Sbjct: 407 RKYLHVDVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. NCBI nr
Match: KAF5202561.1 (F-box/RNI-like superfamily protein [Thalictrum thalictroides])

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-30
Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 141 MEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQ 200
           M   SS LK + + ++  D  DE VD+ +I++ F +LS+LSL Y  R G  H+  + S Q
Sbjct: 283 MISKSSRLKRLRLWSVVFDDDDEVVDVETIAVCFPRLSHLSLSYDLRDGLLHYGLQGSSQ 342

Query: 201 MENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYF 260
           ++NV +LELGW+  +D FS+WV  LL++CP LKKL+I G VSE  NHEECQ LA+F +Y 
Sbjct: 343 LQNVAVLELGWTLITDIFSHWVGGLLDRCPNLKKLVIHGVVSETKNHEECQTLANFTSYI 402

Query: 261 VELMRKYLHIEVQFGFE 278
           V LMRKY+H+EVQF +E
Sbjct: 403 VRLMRKYIHVEVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. ExPASy Swiss-Prot
Match: Q9ZW88 (F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana OX=3702 GN=At1g67190 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.0e-28
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 85  HSHSCI----ETTGLQNLSIFMDDDVDAFFSLI---SWLMFCLKLEKFALINPELVMSDT 144
           H   C+    E  G   L  F  DDV      I   S  +  + +  F ++ P+      
Sbjct: 226 HMKDCVLELFELIGNGTLKHFKLDDVSVIHLDIMETSESLEVVDVNHFTMVWPKFYQ--- 285

Query: 145 QTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRE 204
              M   S  LK + + ++  D  DE +D+ SI+  FS L++LSL Y  + G  H++ + 
Sbjct: 286 ---MISRSQKLKKLRLWDVVFDDDDEIIDVESIAAGFSHLTHLSLSYDLKDGAAHYSLQG 345

Query: 205 SFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFI 264
           + Q+ENVT+LELGW+  +D FS WV +LL +CP LKKLII G VSE     +CQ LA F 
Sbjct: 346 TTQLENVTVLELGWTVINDVFSIWVEELLRRCPNLKKLIIYGVVSETKTQGDCQILATFT 405

Query: 265 TYFVELMRKYLHIEVQFGFE 278
              V+LMRKY+H+EVQF +E
Sbjct: 406 WSIVQLMRKYIHVEVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. ExPASy TrEMBL
Match: A0A0A0LEK3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776870 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.7e-101
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 92  TTGLQNLSIFMDDDVDAFFSLISWLMFCLKLEKFALINPELVMSDTQTAMEHSSSPLKDI 151
           TTGLQNLSIFMDDDVDAFFSLISWLMFCLKLEKFALINPELVMSDTQTAMEHSSSPLKDI
Sbjct: 27  TTGLQNLSIFMDDDVDAFFSLISWLMFCLKLEKFALINPELVMSDTQTAMEHSSSPLKDI 86

Query: 152 FVGNL--ACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENVTILEL 211
           FVGNL  ACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENVTILEL
Sbjct: 87  FVGNLGAACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENVTILEL 146

Query: 212 GWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELMRKYLH 271
           GWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELMRKYLH
Sbjct: 147 GWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELMRKYLH 206

Query: 272 IEVQFGFE 278
           IEVQFGFE
Sbjct: 207 IEVQFGFE 214

[Close]

BLAST of CsaV3_3G037230 vs. ExPASy TrEMBL
Match: A0A6J1CTB9 (F-box/LRR-repeat protein At1g67190-like OS=Momordica charantia OX=3673 GN=LOC111014389 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.7e-38
Identity = 129/369 (34.96%), Postives = 155/369 (42.01%), Query Frame = 0


Query: 73  IPPTVASNSLQ-NHSHSCIETTGLQNLSIFMDD-DVDAFFSLISWLMF------------ 132
           IP  +++++L+   + + ++TTGLQNLS+FMDD D  +  S+I+WLM+            
Sbjct: 52  IPHDLSTSTLEIIITQTILQTTGLQNLSVFMDDFDAFSASSVIAWLMYTRDTLCRLHYNV 111

Query: 133 ------------------------------------------------------------ 192
                                                                       
Sbjct: 112 ETTPSVNIIEKCGRQKLETLELANNSITGVEPTYQKFPCLKSLSLSDIGISALDLNLLLT 171

Query: 193 -CLKLEKFALINPELVMSDTQTAMEHSSSPLKDIFVGNLACDY----------------- 252
            C KLEK ALINPE+VMSD Q  +E SSS LKD+FV  L+ D                  
Sbjct: 172 ACPKLEKLALINPEVVMSDAQPTIELSSSSLKDVFVEGLSLDKFTLQADILEILHLRDCI 231

Query: 253 ------------------------------------------------------------ 278
                                                                       
Sbjct: 232 LDFFELIGKGALRVLKIDDASVIHLDIGENTENLEIVDVCNFTIMWPKFYHTISKASMLK 291

[Close]

BLAST of CsaV3_3G037230 vs. ExPASy TrEMBL
Match: A0A7J6WYP2 (F-box/RNI-like superfamily protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_007854 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 141 MEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQ 200
           M   SS LK + + ++  D  DE VD+ +I++ F +LS+LSL Y  R G  H+  + S Q
Sbjct: 283 MISKSSRLKRLRLWSVVFDDDDEVVDVETIAVCFPRLSHLSLSYDLRDGLLHYGLQGSSQ 342

Query: 201 MENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYF 260
           ++NV +LELGW+  +D FS+WV  LL++CP LKKL+I G VSE  NHEECQ LA+F +Y 
Sbjct: 343 LQNVAVLELGWTLITDIFSHWVGGLLDRCPNLKKLVIHGVVSETKNHEECQTLANFTSYI 402

Query: 261 VELMRKYLHIEVQFGFE 278
           V LMRKY+H+EVQF +E
Sbjct: 403 VRLMRKYIHVEVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. ExPASy TrEMBL
Match: A0A3Q7HXD7 (F-box domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101262341 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 145 SSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENV 204
           SS LK + +  +  D  DE VD+ +IS  F +LS+LSL Y  R    H+  ++SFQ+ENV
Sbjct: 287 SSKLKRLRLWGVVFDDEDEAVDIETISTCFPQLSHLSLSYELRETALHYESQDSFQLENV 346

Query: 205 TILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELM 264
           T+LELGW    D FS+WVA LLE+CP L+KL+I G VSE   HEEC  LA+F ++ V+LM
Sbjct: 347 TVLELGWMVIGDLFSHWVAGLLERCPNLRKLVIYGVVSETKTHEECHTLANFTSFIVKLM 406

Query: 265 RKYLHIEVQFGFE 278
           RKYLH++VQF +E
Sbjct: 407 RKYLHVDVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. ExPASy TrEMBL
Match: A0A6N2BGD4 (F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_011007 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 145 SSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENV 204
           SS LK + +  +  D  DE VD+ +IS  F +LS+LSL Y  R    H+  ++SFQ+ENV
Sbjct: 287 SSKLKRLRLWGVVFDDEDEAVDIETISACFPQLSHLSLSYELRETALHYGSQDSFQLENV 346

Query: 205 TILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFITYFVELM 264
           T+LELGW    D FS+WVA LLE+CP L+KL+I G VSE   HEEC  LA+F ++ V+LM
Sbjct: 347 TVLELGWMVIGDLFSHWVAGLLERCPNLRKLVIYGVVSETKTHEECHTLANFTSFIVKLM 406

Query: 265 RKYLHIEVQFGFE 278
           RKYLH++VQF +E
Sbjct: 407 RKYLHVDVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. TAIR 10
Match: AT1G67190.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.4e-29
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 85  HSHSCI----ETTGLQNLSIFMDDDVDAFFSLI---SWLMFCLKLEKFALINPELVMSDT 144
           H   C+    E  G   L  F  DDV      I   S  +  + +  F ++ P+      
Sbjct: 226 HMKDCVLELFELIGNGTLKHFKLDDVSVIHLDIMETSESLEVVDVNHFTMVWPKFYQ--- 285

Query: 145 QTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRE 204
              M   S  LK + + ++  D  DE +D+ SI+  FS L++LSL Y  + G  H++ + 
Sbjct: 286 ---MISRSQKLKKLRLWDVVFDDDDEIIDVESIAAGFSHLTHLSLSYDLKDGAAHYSLQG 345

Query: 205 SFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFI 264
           + Q+ENVT+LELGW+  +D FS WV +LL +CP LKKLII G VSE     +CQ LA F 
Sbjct: 346 TTQLENVTVLELGWTVINDVFSIWVEELLRRCPNLKKLIIYGVVSETKTQGDCQILATFT 405

Query: 265 TYFVELMRKYLHIEVQFGFE 278
              V+LMRKY+H+EVQF +E
Sbjct: 406 WSIVQLMRKYIHVEVQFEYE 419

[Close]

BLAST of CsaV3_3G037230 vs. TAIR 10
Match: AT1G67190.2 (F-box/RNI-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.4e-29
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 85  HSHSCI----ETTGLQNLSIFMDDDVDAFFSLI---SWLMFCLKLEKFALINPELVMSDT 144
           H   C+    E  G   L  F  DDV      I   S  +  + +  F ++ P+      
Sbjct: 226 HMKDCVLELFELIGNGTLKHFKLDDVSVIHLDIMETSESLEVVDVNHFTMVWPKFYQ--- 285

Query: 145 QTAMEHSSSPLKDIFVGNLACDYSDEDVDLYSISISFSKLSYLSLHYYPRHGTFHHNFRE 204
              M   S  LK + + ++  D  DE +D+ SI+  FS L++LSL Y  + G  H++ + 
Sbjct: 286 ---MISRSQKLKKLRLWDVVFDDDDEIIDVESIAAGFSHLTHLSLSYDLKDGAAHYSLQG 345

Query: 205 SFQMENVTILELGWSDTSDPFSNWVAKLLEKCPKLKKLIICGAVSEINNHEECQNLAHFI 264
           + Q+ENVT+LELGW+  +D FS WV +LL +CP LKKLII G VSE     +CQ LA F 
Sbjct: 346 TTQLENVTVLELGWTVINDVFSIWVEELLRRCPNLKKLIIYGVVSETKTQGDCQILATFT 405

Query: 265 TYFVELMRKYLHIEVQFGFE 278
              V+LMRKY+H+EVQF +E
Sbjct: 406 WSIVQLMRKYIHVEVQFEYE 419

The following BLAST results are available for this feature:

BLAST of CsaV3_3G037230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651088.1	9.9e-157	100.00	hypothetical protein Csa_002699 [Cucumis sativus]	[more]
XP_022144792.1	1.6e-37	34.96	F-box/LRR-repeat protein At1g67190-like [Momordica charantia] >XP_022144793.1 F-...	[more]
KAG4191679.1	1.9e-30	42.13	hypothetical protein ERO13_A07G110300v2 [Gossypium hirsutum] >KAG4191680.1 hypot...	[more]
KAG5584079.1	2.4e-30	51.88	hypothetical protein H5410_044513 [Solanum commersonii]	[more]
KAF5202561.1	2.4e-30	51.09	F-box/RNI-like superfamily protein [Thalictrum thalictroides]	[more]

BLAST of CsaV3_3G037230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW88	9.0e-28	39.00	F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana OX=3702 GN=At1g67190 ...	[more]

BLAST of CsaV3_3G037230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEK3	3.7e-101	98.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776870 PE=4 SV=1	[more]
A0A6J1CTB9	7.7e-38	34.96	F-box/LRR-repeat protein At1g67190-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A7J6WYP2	1.2e-30	51.09	F-box/RNI-like superfamily protein OS=Thalictrum thalictroides OX=46969 GN=FRX31...	[more]
A0A3Q7HXD7	1.2e-30	52.63	F-box domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101262341 PE=...	[more]
A0A6N2BGD4	1.2e-30	52.63	F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_011007 PE=4...	[more]

BLAST of CsaV3_3G037230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67190.1	6.4e-29	39.00	F-box/RNI-like superfamily protein	[more]
AT1G67190.2	6.4e-29	39.00	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31639	F-BOX PROTEIN-LIKE	coord: 157..275
None	No IPR available	PANTHER	PTHR31639:SF77	F-BOX/LRR-REPEAT PROTEIN	coord: 157..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G037230.1	CsaV3_3G037230.1	mRNA