CsaV3_3G036800 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G036800
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 30475769 .. 30477546 (-)
RNA-Seq ExpressionCsaV3_3G036800
SyntenyCsaV3_3G036800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGCTCTTCACTACTCTCCTCAGTACGATCTCCATCCTCGATTCGATCTCTCTTTGCTCATTCGCTCGCATCATACACTCGCAACCAAGGTACGTTTCTTTACCTGTAAGAGTAGTCTCTACCGACGGTTCAAGTTCTAGTTGAACTTAGTCAGATACCAGTCTATATTATAACTGCATCATGCTTCGTCCAATTTAATTCAGTTTATCACATTATCTGTAATTTGCGCAAGATTTGTTTATTTACTACATAATCGACTACTTTTATATTGTTTATCGTCAAGGACTGGTTATCCTTTGATCTCAATCTGTTATTTTCTCTTCAGATCGGTATTCCTCTGGGGTCCGATTTCCGCCAGCACGGGCACTTGGTTCATATTGCGGACTCAAGGTATGTTTTCTGCTCTGAAATAGCAGTTTTATAAAGATGTTTCAAGTGCGAGTTGAACTTAGCCGGAGATCAGTTTATTTGATGAATATGTTCTGCTTTGTTAAATCCAATTTATTTCTCCCATTTTTTGTTGCAATTAATACGGTGCCTCTGGCACTTCAACAAGATCGCCAATGCCTAACAGCTTAAGATTTTAGAATCGTTTGTGGTTAAGTCAGGAGCAGTGCACTACTATATAACTCGACTACTTTTATTTTGTTTATTTTTATTAGTTGATTAATGGTAACCGTCTTAGCTCATTTTGATTTCTCTTCAGTTCGATCTCACGCTGCGCTTCGGTTTCCATCTATGGCTTCACTCGAATGATACAAGGTACACGTTTTCATCCAATATAGTGGTCTTGTAATTAACTATATTTCGAGTTCGAGTAAAAATTGGCCGGAGATCAATTTATCTTGACGATCATATCGTGCTTTTTTCAGTCCAATTAACTTTCTTTCATTATTTGCTAAATATTTGATGTCTGTGCCTTTGAGTAGATTTTAATCCAGCCGAACTTAAGATTTTTGAATGAAGGGTGATTTAGGAAGTTGCGCAAGACATTGTTCATTTCTATATACCTTACTACAGTTATTTGTTTCATGCTCAATGACTGGTAGTCTGTGCTCAATCTATATTTTCCAGTATACGAAATTCAGGAGATAACTGTGAGTCGCTAGATTTTTGCTATAGTTCGAACGAACTGGACTAAGCTAATTTATATAGCAGCTCTTTGGAGGATTTAACCTTTTTTTTCACGAGCATATTGGCAGATTTCTATGCTTTCGCGATTGTATTCTGAAGTGATCTGGCTTGCTTCGCCTTCAATTTTTTTTGGGATAAATTTTGTCGGTGTGTGTGTCTTTCCTTCTCTCCATATAGATAGATATACTGAATGTCTCAAAATAGATGAACTCATGAGTGAAGTTCTTAAAAGTCGAGCCGTTTTTGCATAACGACGGTATTCCATGGAGTCCTTACAATGGTTTGAACGAAAATTTTTAATATATTCCTTTTCCAATAAAATTTCAGTTCAAGAGTACTTGTATTATTTTTTTTGGCTTCTTTAATAACCAAGTATTCCTTTTCCTCGAAATTGTAGAATAGTATTTTCAAACATAAAATTACTCAAAAGTTTGTTTTTAAATGCATTTTCAAATTTCTATATCTAGATATATATATATTCTTCTATACAGCTCCCAAACTACCTCCTAACTTTCGGATTCACACAGGAGTCATATTTTGTTTCACACCGACAAGCCACTAAACACTGCCTCCAAATTTGATACTCTTGTCTTTTGCATCTCTACGCCCATCTCTGTCTCTAATAATTTATCTGACTGA

mRNA sequence

ATGTTTGGCTCTTCACTACTCTCCTCAGTACGATCTCCATCCTCGATTCGATCTCTCTTTGCTCATTCGCTCGCATCATACACTCGCAACCAAGATCGGTATTCCTCTGGGGTCCGATTTCCGCCAGCACGGGCACTTGGTTCATATTGCGGACTCAAGTTCGATCTCACGCTGCGCTTCGGTTTCCATCTATGGCTTCACTCGAATGATACAAGGAGTCATATTTTGTTTCACACCGACAAGCCACTAAACACTGCCTCCAAATTTGATACTCTTGTCTTTTGCATCTCTACGCCCATCTCTGTCTCTAATAATTTATCTGACTGA

Coding sequence (CDS)

ATGTTTGGCTCTTCACTACTCTCCTCAGTACGATCTCCATCCTCGATTCGATCTCTCTTTGCTCATTCGCTCGCATCATACACTCGCAACCAAGATCGGTATTCCTCTGGGGTCCGATTTCCGCCAGCACGGGCACTTGGTTCATATTGCGGACTCAAGTTCGATCTCACGCTGCGCTTCGGTTTCCATCTATGGCTTCACTCGAATGATACAAGGAGTCATATTTTGTTTCACACCGACAAGCCACTAAACACTGCCTCCAAATTTGATACTCTTGTCTTTTGCATCTCTACGCCCATCTCTGTCTCTAATAATTTATCTGACTGA

Protein sequence

MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRFGFHLWLHSNDTRSHILFHTDKPLNTASKFDTLVFCISTPISVSNNLSD*
Homology
[Close]
BLAST of CsaV3_3G036800 vs. NCBI nr
Match: KAE8651074.1 (hypothetical protein Csa_001472 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 3.1e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRF 60
           MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRF
Sbjct: 1   MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRF 60

Query: 61  GFHLWLHSNDTRSHILFHTDKPLNTASKFDTLVFCISTPISVSNNLSD 109
           GFHLWLHSNDTRSHILFHTDKPLNTASKFDTLVFCISTPISVSNNLSD
Sbjct: 61  GFHLWLHSNDTRSHILFHTDKPLNTASKFDTLVFCISTPISVSNNLSD 108

[Close]
BLAST of CsaV3_3G036800 vs. ExPASy TrEMBL
Match: A0A0A0LGH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748850 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRF 60
          MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRF
Sbjct: 1  MFGSSLLSSVRSPSSIRSLFAHSLASYTRNQDRYSSGVRFPPARALGSYCGLKFDLTLRF 60

Query: 61 GFHLWLHSNDTR 73
          GFHLWLHSNDTR
Sbjct: 61 GFHLWLHSNDTR 72

The following BLAST results are available for this feature:
BLAST of CsaV3_3G036800 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651074.13.1e-53100.00hypothetical protein Csa_001472 [Cucumis sativus][more]
BLAST of CsaV3_3G036800 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G036800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGH64.2e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748850 PE=4 SV=1[more]
BLAST of CsaV3_3G036800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G036800.1CsaV3_3G036800.1mRNA