CsaV3_3G035930 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G035930
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transcription initiation factor TFIID subunit 8
Location	chr3: 29997285 .. 29998397 (-)
RNA-Seq Expression	CsaV3_3G035930
Synteny	CsaV3_3G035930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGATGGAGTTGGTAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGGAAATGCAGAGGCAACGAGTTTGTCCAAGAGGTGTCCAAAATTGCGGTGGCGCAAATGTGTAATAGTGTAGGGTTTCAAAGTTTTAAGGAGTCTGCTCTAGACACACTGGCTGACATTGCCATTAAATACCTTCATCACTTAGGGAAGATTGCAACATTTTATGCTAATTTAGCTGGTAGAATTGAGTGCAATGTCTTTGATATAATCAGAGGGCTGGAAGAGTTGGAACAATCACAAGGGTTTTTGGGTGCTTGGCAATCAGATCATTGTCTTGCCAATTCGGGGTCAGTGAAAAACATTGTTTGCTATGTGAATTCAGTTCAAGAGATCCCTTTCGCTCATCCACTACCATGTTTCTCTGTGATCAGAAAAAGGGAGTCAATTCCTACCTTTGTTCAGATTGGTGAAACCCCACCTAGCAAACATATTCCCAGTTGGTTGCCAGCATTTCCTGATGCTCATACGTACAGTCATTCAGCTTTATGGAGGAGGAAGCCGAAAGAGCTGCGTGCTGAAAAGATAGAACTTGCAAAGCAACGGAGGAAGGCGGAGAAATCTTTGTTGGGTTTGCAACAGAGATTGGTTTCCTGCGGTTCAGAAAGAAGTGGCAATGGCGAGATCGAGTTTTCAGGAGGTGAAAGTAATTCATTACTTGGGACTTGTTTTCAAGAGATAGAAGATGGAATTGGATTGCCTTATGAAAACACAAGTGGCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTCGCCCCTGCCATTGAGGCGATTAAAGGCGGTGGCTGTCCGAATAGTCAAGACGAGAAGGCAAAGATTCTTCCTCGTGTGAGGCCTCTTGTTCATTTCAAGTTAGAAACTTGCAAAACATTTCTTGGAGGATCTATGAATTTGAGTGCTAAAATGAGAGGAATTAGGGAATCCGTGTTTTGGGTCAGACGAGACGACGAAAGAGATCGAAAGCATAAGAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCTCAGACATTCTATAGAGAAGCCAGAAGAACTCAATCAATCATAA

mRNA sequence

ATGAGGGATGGAGTTGGTAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGGAAATGCAGAGGCAACGAGTTTGTCCAAGAGGTGTCCAAAATTGCGGTGGCGCAAATGTGTAATAGTGTAGGGTTTCAAAGTTTTAAGGAGTCTGCTCTAGACACACTGGCTGACATTGCCATTAAATACCTTCATCACTTAGGGAAGATTGCAACATTTTATGCTAATTTAGCTGGTAGAATTGAGTGCAATGTCTTTGATATAATCAGAGGGCTGGAAGAGTTGGAACAATCACAAGGGTTTTTGGGTGCTTGGCAATCAGATCATTGTCTTGCCAATTCGGGGTCAGTGAAAAACATTGTTTGCTATGTGAATTCAGTTCAAGAGATCCCTTTCGCTCATCCACTACCATGTTTCTCTGTGATCAGAAAAAGGGAGTCAATTCCTACCTTTGTTCAGATTGGTGAAACCCCACCTAGCAAACATATTCCCAGTTGGTTGCCAGCATTTCCTGATGCTCATACGTACAGTCATTCAGCTTTATGGAGGAGGAAGCCGAAAGAGCTGCGTGCTGAAAAGATAGAACTTGCAAAGCAACGGAGGAAGGCGGAGAAATCTTTGTTGGGTTTGCAACAGAGATTGGTTTCCTGCGGTTCAGAAAGAAGTGGCAATGGCGAGATCGAGTTTTCAGGAGGTGAAAGTAATTCATTACTTGGGACTTGTTTTCAAGAGATAGAAGATGGAATTGGATTGCCTTATGAAAACACAAGTGGCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTCGCCCCTGCCATTGAGGCGATTAAAGGCGGTGGCTGTCCGAATAGTCAAGACGAGAAGGCAAAGATTCTTCCTCGTGTGAGGCCTCTTGTTCATTTCAAGTTAGAAACTTGCAAAACATTTCTTGGAGGATCTATGAATTTGAGTGCTAAAATGAGAGGAATTAGGGAATCCGTGTTTTGGGTCAGACGAGACGACGAAAGAGATCGAAAGCATAAGAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCTCAGACATTCTATAGAGAAGCCAGAAGAACTCAATCAATCATAA

Coding sequence (CDS)

ATGAGGGATGGAGTTGGTAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGGAAATGCAGAGGCAACGAGTTTGTCCAAGAGGTGTCCAAAATTGCGGTGGCGCAAATGTGTAATAGTGTAGGGTTTCAAAGTTTTAAGGAGTCTGCTCTAGACACACTGGCTGACATTGCCATTAAATACCTTCATCACTTAGGGAAGATTGCAACATTTTATGCTAATTTAGCTGGTAGAATTGAGTGCAATGTCTTTGATATAATCAGAGGGCTGGAAGAGTTGGAACAATCACAAGGGTTTTTGGGTGCTTGGCAATCAGATCATTGTCTTGCCAATTCGGGGTCAGTGAAAAACATTGTTTGCTATGTGAATTCAGTTCAAGAGATCCCTTTCGCTCATCCACTACCATGTTTCTCTGTGATCAGAAAAAGGGAGTCAATTCCTACCTTTGTTCAGATTGGTGAAACCCCACCTAGCAAACATATTCCCAGTTGGTTGCCAGCATTTCCTGATGCTCATACGTACAGTCATTCAGCTTTATGGAGGAGGAAGCCGAAAGAGCTGCGTGCTGAAAAGATAGAACTTGCAAAGCAACGGAGGAAGGCGGAGAAATCTTTGTTGGGTTTGCAACAGAGATTGGTTTCCTGCGGTTCAGAAAGAAGTGGCAATGGCGAGATCGAGTTTTCAGGAGGTGAAAGTAATTCATTACTTGGGACTTGTTTTCAAGAGATAGAAGATGGAATTGGATTGCCTTATGAAAACACAAGTGGCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTCGCCCCTGCCATTGAGGCGATTAAAGGCGGTGGCTGTCCGAATAGTCAAGACGAGAAGGCAAAGATTCTTCCTCGTGTGAGGCCTCTTGTTCATTTCAAGTTAGAAACTTGCAAAACATTTCTTGGAGGATCTATGAATTTGAGTGCTAAAATGAGAGGAATTAGGGAATCCGTGTTTTGGGTCAGACGAGACGACGAAAGAGATCGAAAGCATAAGAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCTCAGACATTCTATAGAGAAGCCAGAAGAACTCAATCAATCATAA

Protein sequence

MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGTCFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPLVHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHSIEKPEELNQS*

Homology

[Close]

BLAST of CsaV3_3G035930 vs. NCBI nr
Match: XP_031738252.1 (transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738253.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738254.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738255.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KGN58974.1 hypothetical protein Csa_002614 [Cucumis sativus])

HSP 1 Score: 742.7 bits (1916), Expect = 1.6e-210
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI
Sbjct: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL
Sbjct: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS
Sbjct: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. NCBI nr
Match: XP_008442699.1 (PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >XP_016899603.1 PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >XP_016899604.1 PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >KAA0043998.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] >TYK25142.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 703.0 bits (1813), Expect = 1.4e-198
Identity = 349/370 (94.32%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +EVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYLH LGKIATFYANLAGRIECNVFDIIRGLEELE SQGFLGAWQSDHCLA SGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCF VIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKPKELRAEKIELA+QRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           CFQEIEDG GLPYENTS KDGISHLSVPEVFAPAIE IKGGGCPNSQDEKAKILPR RPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLETCKTF+GGSMN ++KM GIRESVFWVRR+DERD+KH NERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. NCBI nr
Match: XP_038904421.1 (transcription initiation factor TFIID subunit 8-like [Benincasa hispida])

HSP 1 Score: 637.1 bits (1642), Expect = 9.4e-179
Identity = 318/370 (85.95%), Postives = 339/370 (91.62%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSD RKCRGNEF +E+SKIAVAQMCN VGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDLRKCRGNEFGRELSKIAVAQMCNRVGFQSFKESALDTLADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYL HLGKIATFYANLAGRIECNVFDIIRGLEELE SQGFLGAW+SDHCLANSGSVKNI
Sbjct: 61  IKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWESDHCLANSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSV+EIPFAHPLP F VIR R SIP+FVQIGETPPS+HIP+WLPAFPDAHTY+HSA
Sbjct: 121 VCYVNSVEEIPFAHPLPRFPVIRNRGSIPSFVQIGETPPSRHIPNWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWR+KP E  AEKIELA+QRRKA KSLLGLQQRL+SCGSERS NG+I FSG ESNSLLGT
Sbjct: 181 LWRKKPGEPHAEKIELARQRRKAGKSLLGLQQRLISCGSERSRNGQIGFSGDESNSLLGT 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           C QE+EDGIGL  +N  GKDGI HLSVPEVFAPAIEAIKGG  PNSQD+KAKILPR RPL
Sbjct: 241 CLQEMEDGIGLHSDNIIGKDGICHLSVPEVFAPAIEAIKGGCFPNSQDDKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLETCKTFLGGSMNL+AKM G+RESVFW RRD+ERD+K   ERDEKKRRVEYILRHS
Sbjct: 301 VHFKLETCKTFLGGSMNLNAKMAGVRESVFWFRRDNERDQKRDGERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+ PEELN+S
Sbjct: 361 IDNPEELNKS 370

[Close]

BLAST of CsaV3_3G035930 vs. NCBI nr
Match: XP_022983000.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita maxima])

HSP 1 Score: 612.1 bits (1577), Expect = 3.2e-171
Identity = 302/370 (81.62%), Postives = 333/370 (90.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+F +EVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYL HLG+IA FYANLAGR ECNVFDIIRG+EELE SQGF GAW+ +HCL NSGSVK I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKKI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV+EIPFAHPLP F VIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELA+QRRKAEKSLLGLQQRLVSCG ERSGNG++EFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLGS 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           C QE+EDGIG P EN+ GKDGISHLSVPEVFAPA+EAIKG G PNS+D++A ILPRVRPL
Sbjct: 241 CLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLET +TFLGGSMNL+A++ GIRESVFWVRRDDER++KH  ERDEKKRRVEYILRHS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDERNQKHNKERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. NCBI nr
Match: KAG6580615.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 610.9 bits (1574), Expect = 7.2e-171
Identity = 302/370 (81.62%), Postives = 332/370 (89.73%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+F +EVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYL HLG+IA FYANLAGR ECNVFDIIRG+EELE SQGF GAW+ +HCL NSGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV EIPFAHPLP F VIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELA+QRRKAEKSLLGLQ+RLVSCGSERSGNG+IEFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           C QE+EDG+G P E + GKDGISHLSVPEVFAPAIEAIKG G PNS+D++A ILPR RPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEAIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLET +TFLGGSMNL+AK+ GIRESVFWVRRDDERD+KH  ERDEKKRRV+YILRHS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVDYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.4e-63
Identity = 151/375 (40.27%), Postives = 217/375 (57.87%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 66
           N  +++E   +D+    G     EF    +K AVAQ+C SVG+++FK+ AL++L+  A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNIVC 126
           Y+  LGK AT +ANL GR +CNVFDII  L++L  + G  G       L  S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVQEIPFAHPLPCFSVI---RKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS 186
           +VNS +E+PF+ PLP F V    R R+ IP+FV+IGETPP KHIP WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 ALWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSG-----NGEIEFSGGES 246
            +W  +  + R +KIE A+QRRKAE++LL LQ++LV   S R+      +G  E    + 
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 241

Query: 247 NSLLGTCFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKIL 306
           + L      E  + +         +DG   LSV E FAPA+EA + G    +  E  K  
Sbjct: 242 SELRSVSSGEKVESL--------NRDG---LSVIEAFAPAMEAARDGFSSEAHTEWKK-- 301

Query: 307 PRVRPLVHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVE 366
              +P+   KL T K FLG  ++LS +M+G    + +VR +D         RD+K+RR E
Sbjct: 302 --NKPVALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED---------RDDKRRRAE 352

Query: 367 YILRHSIEKPEELNQ 370
           +ILR  +E P +LNQ
Sbjct: 362 FILRQCMENPVDLNQ 352

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.1e-08
Identity = 42/176 (23.86%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 33  KIAVAQMCNSVGFQSFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGL 92
           ++ V+ +    GF+S ++++++TL ++   Y+  +G+ A  Y     R +  + DI+  L
Sbjct: 38  QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97

Query: 93  EELEQSQGFLGAWQSDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFV 152
            E+    GF              +V  +  Y    Q +    P      +  +   P  +
Sbjct: 98  VEM----GF--------------NVDTLPAYAKRSQRMVITAP-----PVTNQPVTPKAL 157

Query: 153 QIGET-PPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSL 208
             G+  P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 158 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.1e-08
Identity = 42/176 (23.86%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 33  KIAVAQMCNSVGFQSFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGL 92
           ++ V+ +    GF+S ++++++TL ++   Y+  +G+ A  Y     R +  + DI+  L
Sbjct: 38  QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97

Query: 93  EELEQSQGFLGAWQSDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFV 152
            E+    GF              +V  +  Y    Q +    P      +  +   P  +
Sbjct: 98  VEM----GF--------------NVDTLPAYAKRSQRMVITAP-----PVTNQPVTPKAL 157

Query: 153 QIGET-PPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSL 208
             G+  P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 158 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy Swiss-Prot
Match: Q9EQH4 (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07
Identity = 42/176 (23.86%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 33  KIAVAQMCNSVGFQSFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGL 92
           ++ V+ +    GF+S ++++++TL ++   Y+  +G+ A  Y     R +  + DI+  L
Sbjct: 36  QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 95

Query: 93  EELEQSQGFLGAWQSDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFV 152
            E+    GF              +V  +  Y    Q +    P      +  +   P  +
Sbjct: 96  VEM----GF--------------NVDTLPAYAKRSQRMVITAP-----PVTNQPVTPKAL 155

Query: 153 QIGET-PPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSL 208
             G+  P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 156 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQILREKAASQRRDVERAL 188

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07
Identity = 43/176 (24.43%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 33  KIAVAQMCNSVGFQSFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGL 92
           ++ V+ +    GF S +++A+++L ++   YL  +G+ A  Y     R +  + DI+  L
Sbjct: 28  QVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDIVVTL 87

Query: 93  EELEQSQGFLGAWQSDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFV 152
            E+    GF              +V ++  Y    Q +    P      +     +P  +
Sbjct: 88  IEM----GF--------------NVDSLPAYAKRSQRMVITAP-----PVTNNPVVPKAL 147

Query: 153 QIGETPP-SKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSL 208
             G+  P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 148 SAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL 180

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy TrEMBL
Match: A0A0A0LDI8 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_3G740170 PE=3 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 7.7e-211
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI
Sbjct: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL
Sbjct: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS
Sbjct: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy TrEMBL
Match: A0A1S3B6Z5 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103486494 PE=3 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.8e-199
Identity = 349/370 (94.32%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +EVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYLH LGKIATFYANLAGRIECNVFDIIRGLEELE SQGFLGAWQSDHCLA SGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCF VIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKPKELRAEKIELA+QRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           CFQEIEDG GLPYENTS KDGISHLSVPEVFAPAIE IKGGGCPNSQDEKAKILPR RPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLETCKTF+GGSMN ++KM GIRESVFWVRR+DERD+KH NERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy TrEMBL
Match: A0A5D3DNP1 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002670 PE=3 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 6.8e-199
Identity = 349/370 (94.32%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +EVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYLH LGKIATFYANLAGRIECNVFDIIRGLEELE SQGFLGAWQSDHCLA SGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCF VIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKPKELRAEKIELA+QRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           CFQEIEDG GLPYENTS KDGISHLSVPEVFAPAIE IKGGGCPNSQDEKAKILPR RPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLETCKTF+GGSMN ++KM GIRESVFWVRR+DERD+KH NERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy TrEMBL
Match: A0A6J1J4F9 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111481673 PE=3 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 1.6e-171
Identity = 302/370 (81.62%), Postives = 333/370 (90.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+F +EVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYL HLG+IA FYANLAGR ECNVFDIIRG+EELE SQGF GAW+ +HCL NSGSVK I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKKI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV+EIPFAHPLP F VIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELA+QRRKAEKSLLGLQQRLVSCG ERSGNG++EFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLGS 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           C QE+EDGIG P EN+ GKDGISHLSVPEVFAPA+EAIKG G PNS+D++A ILPRVRPL
Sbjct: 241 CLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLET +TFLGGSMNL+A++ GIRESVFWVRRDDER++KH  ERDEKKRRVEYILRHS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDERNQKHNKERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. ExPASy TrEMBL
Match: A0A6J1F3H6 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111441840 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.3e-170
Identity = 301/370 (81.35%), Postives = 330/370 (89.19%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+  +EVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDLGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
           IKYL HLG+IA FYANLAGR ECNVFDIIRG+EELE SQGF GAW+ +HCL NSGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV EIPFAHPLP F VIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELA+QRRKAEKSLLGLQ+RLVSCGSERSGNG+IEFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300
           C QE+EDG+G P E + GKDGISHLSVPEVFAPAIE IKG G PNS+D++A ILPR RPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEVIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360
           VHFKLET +TFLGGSMNL+AK+ GIRESVFWVRRDDERD+KH  ERDEKKRRVEYILRHS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of CsaV3_3G035930 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 245.0 bits (624), Expect = 9.7e-65
Identity = 151/375 (40.27%), Postives = 217/375 (57.87%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 66
           N  +++E   +D+    G     EF    +K AVAQ+C SVG+++FK+ AL++L+  A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNIVC 126
           Y+  LGK AT +ANL GR +CNVFDII  L++L  + G  G       L  S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVQEIPFAHPLPCFSVI---RKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS 186
           +VNS +E+PF+ PLP F V    R R+ IP+FV+IGETPP KHIP WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 ALWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSG-----NGEIEFSGGES 246
            +W  +  + R +KIE A+QRRKAE++LL LQ++LV   S R+      +G  E    + 
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 241

Query: 247 NSLLGTCFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKIL 306
           + L      E  + +         +DG   LSV E FAPA+EA + G    +  E  K  
Sbjct: 242 SELRSVSSGEKVESL--------NRDG---LSVIEAFAPAMEAARDGFSSEAHTEWKK-- 301

Query: 307 PRVRPLVHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVE 366
              +P+   KL T K FLG  ++LS +M+G    + +VR +D         RD+K+RR E
Sbjct: 302 --NKPVALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED---------RDDKRRRAE 352

Query: 367 YILRHSIEKPEELNQ 370
           +ILR  +E P +LNQ
Sbjct: 362 FILRQCMENPVDLNQ 352

[Close]

BLAST of CsaV3_3G035930 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 165.2 bits (417), Expect = 9.8e-41
Identity = 123/388 (31.70%), Postives = 187/388 (48.20%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNS--------------VGFQ 60
           M +GVG     + +     +  RGN+F   ++++AVAQ+C S              V F 
Sbjct: 17  MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76

Query: 61  SFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQ 120
           SF+ESALDTL D+A++Y+  +GK A  YANLAGR++ N  DI++ LE+L    GF G   
Sbjct: 77  SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136

Query: 121 SDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSW 180
           +DHCLA+SG VK+I+ Y    +EIPF + LP F   ++++  P+F ++G  PP +HIP W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196

Query: 181 LPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCG-----SER 240
           LPAFP+      S       +E  A  IE     ++   SL  +Q      G        
Sbjct: 197 LPAFPETELCDRS-------EETNAATIEGEIPSKENGSSLPSMQLSFDGGGRLEIHKSS 256

Query: 241 SGNGEIEFSGGESNSLLGTCFQEIEDGIG-----LPYENTSGKD---------GISHLSV 300
              GE   +  E N  L    + +E  +      L   N   +             H+ +
Sbjct: 257 KDVGESTEAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDKHVRNNHHIPI 316

Query: 301 PEVFAPAIEAIKGGGCPNSQD-EKAKILPRVRPLVHFKLETCKTFLGGSMNLSAKMRGIR 355
            E  AP+ +         S+D EK  +  +   LV FK+ T K     SM L AK R  +
Sbjct: 317 LEASAPSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKR----SMCL-AKNRSFQ 376

[Close]

BLAST of CsaV3_3G035930 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-39
Identity = 123/391 (31.46%), Postives = 183/391 (46.80%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSV---------------GF 60
           M +G G     + +        RGN+F   ++++A AQ+C SV                F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QSFKESALDTLADIAIKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAW 120
            SF+E+AL+TL D+ I+Y+ ++GK A FY N+AGR+E N  DI++ LE+L    GF GA 
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 QSDHCLANSGSVKNIVCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPS 180
             +HCLA+SG VK+I+ Y    +EIPF + LP F   R +   P+F  IG  PP +HIP 
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180

Query: 181 WLPAFPDAHTYSHSALWRRKPKELRAEKIELAKQRRKAEKSLLGLQQ-----RLVSCGSE 240
           WLPAFP+    + S       +E+  +KIE   Q R    SL+ +QQ     RL    S 
Sbjct: 181 WLPAFPETKMSNGS-------EEINVDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSM 240

Query: 241 RSGNGEIEFSGGESNSLLGTCFQEIEDGIGL-----PYENTSGKDGISHLSVPEV----F 300
              + +      E N  L       E  + L     P E    +   +HL    +     
Sbjct: 241 DQKDVQKPIEEPEGNPFLAAPIWVGEKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSHH 300

Query: 301 APAIEAIKGGGCPNS-------QDEKAKILPRVR-PLVHFKLETCKTFLGGSMNLSAKMR 355
            PA+EA       N        +DE+ +   R +  L+ FK+ T K      +N   + +
Sbjct: 301 IPALEAYALSDKINDKNRLAGMEDEQKRDGARTQGALLRFKIGTRKASECWKINQCLEEK 360

[Close]

BLAST of CsaV3_3G035930 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 95.5 bits (236), Expect = 9.5e-20
Identity = 75/254 (29.53%), Postives = 119/254 (46.85%), Query Frame = 0


Query: 8   NMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHHL 67
           N K K +++SD       EF   ++KIAV+Q+C S+G+++   SAL+TL     K+L  L
Sbjct: 7   NSKLKFEETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSL 66

Query: 68  GKIATFYANLAGRIECNVFDIIRGLEE--LEQSQGFLGAWQ----SDHCLANSGSVKNIV 127
            ++A+ ++N A R E N+FDI+ GL++  L  S  F G          CL  S  ++N+ 
Sbjct: 67  AELASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLS 126

Query: 128 CYVNSVQEIPFAHPLPCFSVIRKRESIPTF------VQIGETPPSKHIPSWLPAFPDAHT 187
            +V    EIPFA PLP      +RE   +F      V +  +     +P+WLP FPD+  
Sbjct: 127 DFVTYAPEIPFAKPLP------RRERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPDSSL 186

Query: 188 YSHSA--------LWRRKPKELRAEKIELAKQRRKA-------EKSLLGLQQRLVSCGSE 235
            S           LW      +R E +  + + +         +K    ++QR  S G +
Sbjct: 187 CSDRCSKDNRSDHLWENSDSVIRREILPESLKSKSGGRLPVMRDKVRFKMEQRDWSSGGD 246

The following BLAST results are available for this feature:

BLAST of CsaV3_3G035930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738252.1	1.6e-210	100.00	transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738253....	[more]
XP_008442699.1	1.4e-198	94.32	PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >...	[more]
XP_038904421.1	9.4e-179	85.95	transcription initiation factor TFIID subunit 8-like [Benincasa hispida]	[more]
XP_022983000.1	3.2e-171	81.62	transcription initiation factor TFIID subunit 8-like [Cucurbita maxima]	[more]
KAG6580615.1	7.2e-171	81.62	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]

BLAST of CsaV3_3G035930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	1.4e-63	40.27	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
A7MAZ4	8.1e-08	23.86	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]
Q7Z7C8	8.1e-08	23.86	Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ...	[more]
Q9EQH4	1.1e-07	23.86	Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8...	[more]
Q7ZYA2	1.1e-07	24.43	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]

BLAST of CsaV3_3G035930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDI8	7.7e-211	100.00	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3B6Z5	6.8e-199	94.32	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DNP1	6.8e-199	94.32	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1J4F9	1.6e-171	81.62	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F3H6	2.3e-170	81.35	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_3G035930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	9.7e-65	40.27	TBP-associated factor 8	[more]
AT3G02160.1	9.8e-41	31.70	Bromodomain transcription factor	[more]
AT5G15570.1	1.8e-39	31.46	Bromodomain transcription factor	[more]
AT1G31240.1	9.5e-20	29.53	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..369
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 25..101 e-value: 4.9E-26 score: 102.5
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 26..95 e-value: 1.2E-21 score: 76.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..107 e-value: 9.1E-19 score: 68.9
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 162..210 e-value: 6.4E-15 score: 55.5
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 162..214 e-value: 6.70822E-18 score: 74.6167
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G035930.1	CsaV3_3G035930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity