CsaV3_3G035800 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCCGAGAAAAATTGTCTGGTGCAGAGATATTGGGCCCAATTAATCGCAACGGGCTAACCGCGCTAGAGTTGTTGTCAACAGTGAGAAGTTTCTTCCGACCTCCAACCTCGAGATTGTCGCCGTCGATTTCATCGGCCATTGACTAACAGGGAAATATGGGCAGTGATCGGAAGCGAATCTTGATAGGTTTGACGGTGGCGATGTTCTTAGGATTGGTGGTGTACATGAAGCTTTGGACCATCGACTATTCCATGTCTGCCGATGAAGCCGAACTTCTCAGGTTTGGATTTTCCATTTTTTGTTCGTTTTTCTCGTTTTGTTGCGAAAATTTGTCTGAAATTTTAGGAAATGGTACCGTCTTCTCTTAATTCGTGTTGTCGGAACTTCGTAATGTAAAATTCACTGAGATTATCGGTTAGCTTTAATTTAATCGTTTATGGATCATTCAGACGGCAGTTCGATCTTGCAAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGATAACGAACTAGATAGAGCTAATAGATGTAAAAGTGAACTAAACCAGGTCAGTACTTTAGGGTTAAGTTGCCAAGAAAATTGATGAATTCAATAGAGTTTCTTTCTCATTGCATTGATTCAGCGGAATGGTTTTATTAAAATTGATGCAATTACTTCTCTGAAACCGGTTGTTTAATGGGCGCATGCTTGAATTTTGTTCATCTTGTTGCTGCTCCTATGATTTACGGCTTTCCAATCAAACAATTCATAACGTCTTGCATTGTCAACCGGAAAAAAAAAAAACTTGTTTGACGCTGAATATGAGAAATGCTTGTGTATTGAACAAGAGCCCAGTTCTTGGCAGCATGAACTTTGAAATATTTCTCACATAGTTGATCTCTTATCAGTAGTAAGATGCTGTTTTGAAAGTAACTGGTTTAATTTTAGCTTATGCTTTTGGGTTTGAGATAATTTAACATGATATTAGATCATTTAGTATTCAAACATGGCAATGTGATTTCCTTTTCAATTACTATTGACATCACTTGTTTGATCAACATAATCTTGAAATCTACAAGTGAGAGGAATATTAGGAAGACATAAAGCTTCGTGCGGTAACTATTTAATTTTGGATTTTAGTCTTTGAAAATTAAGTGTATAAACATTCATTCCACCTCTAAATTACTTTCTTATTTACTTTATACCTATGAAAATTTTTGAAGACTAAAGTAAAGAACTATGGTAGGAAATTGAGAGGAAATAAGATTGATTTCCAAAAACTAAACAAAAAGCCAAATTCAAATGGTTATTAAAGGGGTCAAAACACTTGAATTTAACACCATGAGGCTGTAAGTTGCTTGTACATTTTTGTATTTGACCAATGATTGTGTACAATTCTACTTAGCAGCTTAAGGTATCGTTTGAGAAGGTGGGGGATGCTGCTAAAATCAATGAGAAGCTAACAAAGACGCAAGAGGTAATCCCTTTGATGTTAACTAATTAATGAGTTGTTCCAAAAAATTTTGAAAATGATTTCAGAACTAAAATTTTGTCCCACATCTTTTATCTCTCAAACATGTCTAAAAATTTCAGGAAAACTTTGCTCTCCGCACACAAGTGGATGCTTTACAGCGAAGGCTAGAGGCCGAGAAGTCAAGATGTGGCTCTCAATAAAGCTAATCAACAGACACAGAAGCGAAAAGGGTACATACTAACATTGTTTTTGAATTGTAAAACGTCTATCACAGAGGTTGCTTGGCTATGGCTGGTGATGGGAAGTACTAAACCAAATTGATAAAACTAATGAAGGTCGGTCACTCCAGGTTGTGGTTTTTATAGGTTTCTCTATTCTCTTTGTCGTCTGGAGTTTGTAGGAAAAGAGATTGTTGTGGAATCGTCGCGAGATCATCAACTCGACTTTCGCTTCTGAGGATTCTACTGGCATCGGAATGACAAATGTGGATAGCTACAATCAAAGCAGTAACTAAAAGGCAAAAGCACCATGGGGGAGCTTCTCCTTCATGAATCCAGAGTATGTAAAAGTTTAGGTGTAGAAAAATTTTAGAATTTGGAACCTAGGGTTTTACTCTTTTCTTCTCCCCTTGCAATTCATACGATTCAAAGAGTTAATTTGAATTGGTGTTGTGGCCTCAAAATTGATAGTATAAAATTACAA ATGGGCAGTGATCGGAAGCGAATCTTGATAGGTTTGACGGTGGCGATGTTCTTAGGATTGGTGGTGTACATGAAGCTTTGGACCATCGACTATTCCATGTCTGCCGATGAAGCCGAACTTCTCAGACGGCAGTTCGATCTTGCAAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGATAACGAACTAGATAGAGCTAATAGATGTAAAAGTGAACTAAACCAGCTTAAGGTATCGTTTGAGAAGGTGGGGGATGCTGCTAAAATCAATGAGAAGCTAACAAAGACGCAAGAGGAAAACTTTGCTCTCCGCACACAAGTGGATGCTTTACAGCGAAGGCTAGAGGCCGAGAAGTCAAGATGTGGCTCTCAATAA ATGGGCAGTGATCGGAAGCGAATCTTGATAGGTTTGACGGTGGCGATGTTCTTAGGATTGGTGGTGTACATGAAGCTTTGGACCATCGACTATTCCATGTCTGCCGATGAAGCCGAACTTCTCAGACGGCAGTTCGATCTTGCAAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGATAACGAACTAGATAGAGCTAATAGATGTAAAAGTGAACTAAACCAGCTTAAGGTATCGTTTGAGAAGGTGGGGGATGCTGCTAAAATCAATGAGAAGCTAACAAAGACGCAAGAGGAAAACTTTGCTCTCCGCACACAAGTGGATGCTTTACAGCGAAGGCTAGAGGCCGAGAAGTCAAGATGTGGCTCTCAATAA MGSDRKRILIGLTVAMFLGLVVYMKLWTIDYSMSADEAELLRRQFDLANREAMDESAEWRRMYDNELDRANRCKSELNQLKVSFEKVGDAAKINEKLTKTQEENFALRTQVDALQRRLEAEKSRCGSQ* Homology
BLAST of CsaV3_3G035800 vs. NCBI nr
Match: XP_004137824.1 (uncharacterized protein LOC101217573 isoform X2 [Cucumis sativus] >XP_031737689.1 uncharacterized protein LOC101217573 isoform X2 [Cucumis sativus] >KGN58960.1 hypothetical protein Csa_001294 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. NCBI nr
Match: XP_031737686.1 (uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus] >XP_031737687.1 uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus] >XP_031737688.1 uncharacterized protein LOC101217573 isoform X1 [Cucumis sativus]) HSP 1 Score: 241.5 bits (615), Expect = 4.0e-60 Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. NCBI nr
Match: XP_008442682.1 (PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo] >XP_008442683.1 PREDICTED: uncharacterized protein LOC103486481 [Cucumis melo] >TYK25130.1 uncharacterized protein E5676_scaffold352G002550 [Cucumis melo var. makuwa]) HSP 1 Score: 236.9 bits (603), Expect = 9.8e-59 Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. NCBI nr
Match: KAA0044010.1 (uncharacterized protein E6C27_scaffold236G003560 [Cucumis melo var. makuwa]) HSP 1 Score: 232.3 bits (591), Expect = 2.4e-57 Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. NCBI nr
Match: XP_038903114.1 (uncharacterized protein LOC120089790 [Benincasa hispida]) HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55 Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. ExPASy TrEMBL
Match: A0A0A0LAF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G739550 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 7.9e-62 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. ExPASy TrEMBL
Match: A0A1S3B6A3 (uncharacterized protein LOC103486481 OS=Cucumis melo OX=3656 GN=LOC103486481 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.8e-59 Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. ExPASy TrEMBL
Match: A0A5D3DPC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002550 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.8e-59 Identity = 122/128 (95.31%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. ExPASy TrEMBL
Match: A0A5A7TLC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003560 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57 Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. ExPASy TrEMBL
Match: A0A6J1G4Y8 (uncharacterized protein LOC111450864 OS=Cucurbita moschata OX=3662 GN=LOC111450864 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49 Identity = 105/128 (82.03%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of CsaV3_3G035800 vs. TAIR 10
Match: AT2G37195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 132.5 bits (332), Expect = 2.4e-31 Identity = 66/127 (51.97%), Postives = 97/127 (76.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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