CsaV3_3G035550 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G035550
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	nuclear pore complex protein NUP62 isoform X1
Location	chr3: 29779702 .. 29784584 (-)
RNA-Seq Expression	CsaV3_3G035550
Synteny	CsaV3_3G035550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGGAGAGGCTGAAATATAAAGAAGTTCAAAATACAAGGACGTAAATGATCTTTTTAGTTTCTAATTTTAAACCGCCATTTCCACCGATTTCAAACAAATAAATTAAAATATTAGAACCCTCCTTTTCCCTCTCCAAAACCTCCCGTCCCTTTCTCTCCACCTTTGGATTTTCGAAATCCTTCAATCCGATTCCGACAGATCATCATCTCTTTCGCGATTCTTCCAGATCGATATCCATGGACGCCGTAGGTGCTGATCCCGATCGCCGTTTTTGCCGTCTCAGCCTCATTGATTTCGCCTCCGAGGACGATTTTCTCCTCCCTTCTCCTTCATGCGACCTCCACGACGTCAGTTCTTTAGGTCTGTTCCGGAAATTCTTCATTTCAGTACAGTTATATTTATTGTGCTGCTAATCCTACTTTTGTTGATAATTTGTGTTTTTGCCGTATGTTCTATGTATGGAGCTGCTTGAGTTGCATTTCTGTTGTGTGGTTTTTGTTTTTCTTGGATTTTCGATATTCTCTTTTACCACTCAAATTTCAGAAGTTGCTTTAATTTTTGTTTTTGGTCGATATTAATCTTTTTTACTTCGTTACGCGTCGTTCATCTGCGGCAGTTTTATATCGATTTTCTTGGCTTTAAGAACTGGCAGATTTGCTTAATATCTGGGAAACTCGAAGTTTTGATGATTGTATTGGAATTTTTTATTTTTTATTTTTTATGTGCTTATGTGTAGACATTACAAATGAAGACGAGGAACATGATAGAATCAGACAATCAGGGGCCATAGATTGTAGCAGAATAGATGAGAGAACAGATGGGTTCGAACAGAGAGAGGATAAACCTCAATTAGTCCCATCATCGGAACCGGAAGCGATCAAAAGAAATGGAAAATATAATTTGCGTAAGAGTTTAGCATGGGATAGCGCTTTCTTCACCAGTGCAGGTATTGTTTTATTTGCGTTTGTGATATTACTTTAATTTTGTCCTATATACCTCCACTGTTCCAACGTCTTGTGTTTCAGGGTTTTTGGATCCTGAGGAGTTTACTAGCATGATTGCACCGGTAGGCAGAAATGAAAAACGTGTATTACCCATAATTTCAGAAGATGTTCAGAAATCTTCAGATTCAATATCTACATTGGAAAGTGAAATTATGCCACTAGAAAGCATTGAGGGCAATCTATTCGAAGATGTAAGGGCTTCAATTCAAAAATCTAGTAGAATAGTTGGAAAGGCCAATTCCAGAACTAAAGTTGAACCCGGGCGACAGGAAGCACAAAAACCGCCATGTGAGCTACTTTCTAGTTTCTAAAAAATATTGGTTTAGTGATAACAAATTGAGTTTTGCTCATGTTATTTAGATAAAATGAATAAATAAGAAGCCTGTTCACAAAAGCCCAGCTTCGTAACGGGAACAGTACTATAATTTTGGTATGGTTCTCATTGAAGAACCAGTTTTTCTTTTCAAAACATGAAGCTATTTACGTTCTATATAGAATTGCAACCTTCTATTTGTTTGATATTTAGATGAAAAGATTCATGTGGGACAGTAGAGTACAGATTATAGAACATAAATATTATCTTCTTTGTACTTTCTACCATGACTGTTCTGCAACAGCAAGAGAGATCATTTTGTTCTTCTCCAAGCAAATCTGTATGTTTCAAATTTCGTAGGAGTTTGCCACTAACTCTGCAGGAGACCTGTGGGTTTGGCTAGACTTTATGAATCTTTTATATTATCTTTTTATATCTCATTATAACTCAATCTAACATTACTGCATTATTTTCAGCTGCAGGAAGGCTTGATCTTACTTCACAAAATAAGGCAAGTAAACAATTTTGCATCCTCTTAGTGTTTCATAGGTGTCAATATCGTTTTGGTCAATAGAACTTTCGTAGCTATTTTGCTTTGTTCTTTATATTTTCAAATGTTTTATTTTGATGCTTGATTTTTCATAAAAGTTATTTTCGATCCTTGTTATTAAGTTTCTGTCTAGTATTTATCTGAAAATTTTGTTCACTTGTCCTTAGATATGATATCATAGATTCATACTCTATTATATAGGTGGTGGTCAAAACATGGTCGTGAAGTTTTTGTTAAGGGTATTGGGAAGTTCTGTGTTTAAGGACAAAAGAAGATTTCTATACAAGTCTAAGGATCAAAATAGAACATTTGGAAGTATATAAACCAAAATGGCATAAGAGTTAAAATATCCTAAAGTTAGATTTTAACTTTTTTTGTACATTTGAACTCATGATGTTACTGTGTAACACTTCAGATGAAGGATAGGTCTGCATCCAGTAAGCTACCTGATGCGTTGCAAGGACCTGGAAAAACTATTAAGCAGAATTCTTCTCAACCACGCGGTGGACAGGTAGTATATAAGCCTTAGTGTTTTTTCTGATTTTGTAGAATTCAAATATCTTCTGTGGCTATTAACCCAGGGCAATGGCATCTACATCAACGGACCACCAGCAATATTATAAACTTATATCTGACCTTTTGACTCGATGCATTTTATTCCTATATGATATTACGGTCAAAGTCCATTGCGTTTGTTCTATTGTACCACTGATGCCCATGTAATGCAAGTGTATAACATAGAATTCTGTGACCATGGACTAGCATATGCCTGTCTAATAGCCATCTCATTTCTTGTTGACCATTTTCTACTCATTTGTCCCACATTTTCTTGATGTGTCTGAAAAAAGAATGTGTTCTTATTTTTGAAGCAATTGAAGGCAGTCGGCAGGCTTCCTTCCAGCTCATTATCATCAAAGAAGCCTTCCCTTGGCCATAATCCTACAGCCACTGCAAAGGATGGTACTATAAGTGGTACAAGACCTGCAGGTGATTAGAACTTTAATTTTGTTATATATATATTTTCTTTGAGACGGGTTGCAAATATATACCCATTCTGTTCTTTTTCACGCAAATTGCAGATAGACGGGATTCAGTTAGTCTTAGAACTACTGCACATAGGCCTACTCGAATTTCAACTTCAGCTAAAAGTGCCCAAAAGACTTCCTCCGACGTTTCTACAAGTTCATCTGACAAGGTTGGTAAATCTTCCTCCAAAGATGTGAGGAAGAAAACAGAGTGTAAGGCTTTACCTTCCTCGGGTGTCCAAAAAACACCATCACGAGTTACATCGAAGGTCACAAGTCCTTTTGGGAAATCACGTCTCTCTTCTAAGTTTGCTTCAGGAATATCACCTGCTAGCTCTATTAGTGAGTGGTCAACGGAGTCATCGTCTAGCCCAAGAGTCAGCCTTCACTCAATTTCAAGCAAAAGAATCTCTACAGACAGTGAGGCTTCTCATGATGGAAGAAACCATCCTGTTGGACCCCATACTCAGACTACTGGTTTGCTGTCTCAATCAGTAAAGAAAGCTTCTTCGCAATCTTCTATACTTCCTCCCGCTTCTGTGAAGCCTTCGGGCCTTCGATTGCCATCGCCTAAAATCGGTTACTTTGATGGGGTAAGTTTTGTGTTTTTTTATATTTATATGATTCGGTATCTTTAGTTGGGGATTTTTTTAAAGTCATCCTAAGCAAGGGAACCAAAATTTGTGACTGTATTTCACAGAGTAAAACATCTAGCACGAAATCTAATCTGGCTGTACCCGGTGGCATGACTAAGATTGGAGCTGGAAATGTCAGCACTAATGGAGGCGAAAGTAAGATCAAGCCCTCAAAGCTCCAACCTGCTAGATTGTTGCCCAAGAGCACAACTCGTGCGAATCCTACTATGAATTTGAAATCTCATAAATCTTCTGCAACCAAGATGTCGAAAACAAAAGCCCTCGACCAAAAAGTCAAGGAGCTTCATCGCGAAGGATCAAATACCGATTTGCACGATTCAGATGCATGTGCAGAAAGTAATGATATTTCTGGAGCTATGAGGGAGGAAATGACCAAAGAAAATGAAGCTTGCAGTAATGCAAACGAAACGCTGACAACTAACTCCGCGGGAGAAAACCTAACAACAATTCACCGAACTTCCAGACCTAATGTTGATGGTATGGTTATCGGTTCCATCTCAAAGAAGTGATCGGTGAATGTGGTGAGAGAATTTGTTTGAGAGAGGGTTCAATGAGTGGAAAGAAGGCAACTTTATGCTTGCAGAAGGTAAGTCAGAATCATGAATTTGGTTGTCATTGGTTCTCGAAACGAGTTTATTAACTGTCGATGAGGATTCTCGGCTTGTCAAATATCTGATAATGTTCAAAGGAAGCCTCCCACTTTCTTGTCAAAACTCACAAGTTTCATTATCTCACTGCTTCATCTAACTTTGATATCTGCTGTTGACATCAATATCCTCTCTAACCAAGGCCTATTTGGAATCGACCATCAAGTGCTTAAAATGGTGTTCTAACCATAACAGAAAGCACTTGAAAAGCTATTCCAAATAAATCCCAAGGATGCTTTGTCTCAGCTGCAGCCTCAAATGTGAATCAAGAATGGCCCCATCTTTGCCCATCTAAGCGAGACCATTCCGGGAATAGCCAATTTTGTAACGGCCTTTTTGGGTTTTCTGATGGAATGCGAAGGTCTATTGTGCTGCAGCTGATCATCTGATACCAACTTATATGGAGGCATTGCTAATCAGTGAGCTAACTTGGTATCCACGACGTCGTCATGTTCGGGTTGCTTGTGAACTCGGTGGAAGAGATCGAAGAAATGTTTGACGACGTTGATTTCGAACCATTCAGAATCCAGAAATGGTTGGCATGTTTTACCTTTTTCAGTTCGTGAATAGCATTGTGAATGTTCCTCTTTTAACCATTTTGCTGTACTGCAATGAAAATTTTATTGTAGTAATTCTGGATCCATTTTATTATGGATTTTTTAACCCAATTAAATATGGATTTAGT

mRNA sequence

ATGGACGCCGTAGGTGCTGATCCCGATCGCCGTTTTTGCCGTCTCAGCCTCATTGATTTCGCCTCCGAGGACGATTTTCTCCTCCCTTCTCCTTCATGCGACCTCCACGACGTCAGTTCTTTAGACATTACAAATGAAGACGAGGAACATGATAGAATCAGACAATCAGGGGCCATAGATTGTAGCAGAATAGATGAGAGAACAGATGGGTTCGAACAGAGAGAGGATAAACCTCAATTAGTCCCATCATCGGAACCGGAAGCGATCAAAAGAAATGGAAAATATAATTTGCGTAAGAGTTTAGCATGGGATAGCGCTTTCTTCACCAGTGCAGGGTTTTTGGATCCTGAGGAGTTTACTAGCATGATTGCACCGGTAGGCAGAAATGAAAAACGTGTATTACCCATAATTTCAGAAGATGTTCAGAAATCTTCAGATTCAATATCTACATTGGAAAGTGAAATTATGCCACTAGAAAGCATTGAGGGCAATCTATTCGAAGATGTAAGGGCTTCAATTCAAAAATCTAGTAGAATAGTTGGAAAGGCCAATTCCAGAACTAAAGTTGAACCCGGGCGACAGGAAGCACAAAAACCGCCATCTGCAGGAAGGCTTGATCTTACTTCACAAAATAAGATGAAGGATAGGTCTGCATCCAGTAAGCTACCTGATGCGTTGCAAGGACCTGGAAAAACTATTAAGCAGAATTCTTCTCAACCACGCGGTGGACAGCAATTGAAGGCAGTCGGCAGGCTTCCTTCCAGCTCATTATCATCAAAGAAGCCTTCCCTTGGCCATAATCCTACAGCCACTGCAAAGGATGGTACTATAAGTGGTACAAGACCTGCAGATAGACGGGATTCAGTTAGTCTTAGAACTACTGCACATAGGCCTACTCGAATTTCAACTTCAGCTAAAAGTGCCCAAAAGACTTCCTCCGACGTTTCTACAAGTTCATCTGACAAGGTTGGTAAATCTTCCTCCAAAGATGTGAGGAAGAAAACAGAGTGTAAGGCTTTACCTTCCTCGGGTGTCCAAAAAACACCATCACGAGTTACATCGAAGGTCACAAGTCCTTTTGGGAAATCACGTCTCTCTTCTAAGTTTGCTTCAGGAATATCACCTGCTAGCTCTATTAGTGAGTGGTCAACGGAGTCATCGTCTAGCCCAAGAGTCAGCCTTCACTCAATTTCAAGCAAAAGAATCTCTACAGACAGTGAGGCTTCTCATGATGGAAGAAACCATCCTGTTGGACCCCATACTCAGACTACTGGTTTGCTGTCTCAATCAGTAAAGAAAGCTTCTTCGCAATCTTCTATACTTCCTCCCGCTTCTGTGAAGCCTTCGGGCCTTCGATTGCCATCGCCTAAAATCGGTTACTTTGATGGGAGTAAAACATCTAGCACGAAATCTAATCTGGCTGTACCCGGTGGCATGACTAAGATTGGAGCTGGAAATGTCAGCACTAATGGAGGCGAAAGTAAGATCAAGCCCTCAAAGCTCCAACCTGCTAGATTGTTGCCCAAGAGCACAACTCGTGCGAATCCTACTATGAATTTGAAATCTCATAAATCTTCTGCAACCAAGATGTCGAAAACAAAAGCCCTCGACCAAAAAGTCAAGGAGCTTCATCGCGAAGGATCAAATACCGATTTGCACGATTCAGATGCATGTGCAGAAAGTAATGATATTTCTGGAGCTATGAGGGAGGAAATGACCAAAGAAAATGAAGCTTGCAGTAATGCAAACGAAACGCTGACAACTAACTCCGCGGGAGAAAACCTAACAACAATTCACCGAACTTCCAGACCTAATGTTGATGGTATGGTTATCGGTTCCATCTCAAAGAAGTGA

Coding sequence (CDS)

ATGGACGCCGTAGGTGCTGATCCCGATCGCCGTTTTTGCCGTCTCAGCCTCATTGATTTCGCCTCCGAGGACGATTTTCTCCTCCCTTCTCCTTCATGCGACCTCCACGACGTCAGTTCTTTAGACATTACAAATGAAGACGAGGAACATGATAGAATCAGACAATCAGGGGCCATAGATTGTAGCAGAATAGATGAGAGAACAGATGGGTTCGAACAGAGAGAGGATAAACCTCAATTAGTCCCATCATCGGAACCGGAAGCGATCAAAAGAAATGGAAAATATAATTTGCGTAAGAGTTTAGCATGGGATAGCGCTTTCTTCACCAGTGCAGGGTTTTTGGATCCTGAGGAGTTTACTAGCATGATTGCACCGGTAGGCAGAAATGAAAAACGTGTATTACCCATAATTTCAGAAGATGTTCAGAAATCTTCAGATTCAATATCTACATTGGAAAGTGAAATTATGCCACTAGAAAGCATTGAGGGCAATCTATTCGAAGATGTAAGGGCTTCAATTCAAAAATCTAGTAGAATAGTTGGAAAGGCCAATTCCAGAACTAAAGTTGAACCCGGGCGACAGGAAGCACAAAAACCGCCATCTGCAGGAAGGCTTGATCTTACTTCACAAAATAAGATGAAGGATAGGTCTGCATCCAGTAAGCTACCTGATGCGTTGCAAGGACCTGGAAAAACTATTAAGCAGAATTCTTCTCAACCACGCGGTGGACAGCAATTGAAGGCAGTCGGCAGGCTTCCTTCCAGCTCATTATCATCAAAGAAGCCTTCCCTTGGCCATAATCCTACAGCCACTGCAAAGGATGGTACTATAAGTGGTACAAGACCTGCAGATAGACGGGATTCAGTTAGTCTTAGAACTACTGCACATAGGCCTACTCGAATTTCAACTTCAGCTAAAAGTGCCCAAAAGACTTCCTCCGACGTTTCTACAAGTTCATCTGACAAGGTTGGTAAATCTTCCTCCAAAGATGTGAGGAAGAAAACAGAGTGTAAGGCTTTACCTTCCTCGGGTGTCCAAAAAACACCATCACGAGTTACATCGAAGGTCACAAGTCCTTTTGGGAAATCACGTCTCTCTTCTAAGTTTGCTTCAGGAATATCACCTGCTAGCTCTATTAGTGAGTGGTCAACGGAGTCATCGTCTAGCCCAAGAGTCAGCCTTCACTCAATTTCAAGCAAAAGAATCTCTACAGACAGTGAGGCTTCTCATGATGGAAGAAACCATCCTGTTGGACCCCATACTCAGACTACTGGTTTGCTGTCTCAATCAGTAAAGAAAGCTTCTTCGCAATCTTCTATACTTCCTCCCGCTTCTGTGAAGCCTTCGGGCCTTCGATTGCCATCGCCTAAAATCGGTTACTTTGATGGGAGTAAAACATCTAGCACGAAATCTAATCTGGCTGTACCCGGTGGCATGACTAAGATTGGAGCTGGAAATGTCAGCACTAATGGAGGCGAAAGTAAGATCAAGCCCTCAAAGCTCCAACCTGCTAGATTGTTGCCCAAGAGCACAACTCGTGCGAATCCTACTATGAATTTGAAATCTCATAAATCTTCTGCAACCAAGATGTCGAAAACAAAAGCCCTCGACCAAAAAGTCAAGGAGCTTCATCGCGAAGGATCAAATACCGATTTGCACGATTCAGATGCATGTGCAGAAAGTAATGATATTTCTGGAGCTATGAGGGAGGAAATGACCAAAGAAAATGAAGCTTGCAGTAATGCAAACGAAACGCTGACAACTAACTCCGCGGGAGAAAACCTAACAACAATTCACCGAACTTCCAGACCTAATGTTGATGGTATGGTTATCGGTTCCATCTCAAAGAAGTGA

Protein sequence

MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAIDCSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFTSMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIVGKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQPRGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTRISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPFGKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHRTSRPNVDGMVIGSISKK*

Homology

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BLAST of CsaV3_3G035550 vs. NCBI nr
Match: XP_004137963.1 (nucleolar protein dao-5 [Cucumis sativus] >KGN58935.1 hypothetical protein Csa_001734 [Cucumis sativus])

HSP 1 Score: 1143.6 bits (2957), Expect = 0.0e+00
Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID
Sbjct: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT
Sbjct: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP
Sbjct: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF
Sbjct: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPH 420
           GKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPH
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPH 420

Query: 421 TQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMT 480
           TQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMT
Sbjct: 421 TQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMT 480

Query: 481 KIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKV 540
           KIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKV
Sbjct: 481 KIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKV 540

Query: 541 KELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHR 600
           KELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHR
Sbjct: 541 KELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHR 600

Query: 601 TSRPNVDGMVIGSISKK 618
           TSRPNVDGMVIGSISKK
Sbjct: 601 TSRPNVDGMVIGSISKK 617

[Close]

BLAST of CsaV3_3G035550 vs. NCBI nr
Match: XP_008442645.1 (PREDICTED: nuclear pore complex protein NUP62 isoform X1 [Cucumis melo] >KAA0044034.1 nuclear pore complex protein NUP62 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.3e-291
Identity = 556/604 (92.05%), Postives = 568/604 (94.04%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVE GRQEA+KPPSAGRLDLTSQNKMKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 GKANSRTKVESGRQEARKPPSAGRLDLTSQNKMKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQQLKAVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQQLKAVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 600

[Close]

BLAST of CsaV3_3G035550 vs. NCBI nr
Match: XP_008442646.1 (PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Cucumis melo])

HSP 1 Score: 1001.5 bits (2588), Expect = 3.2e-288
Identity = 553/604 (91.56%), Postives = 565/604 (93.54%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVE GRQEA+KPPSAGRLDLTSQNKMKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 GKANSRTKVESGRQEARKPPSAGRLDLTSQNKMKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQ   AVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQ---AVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 600

[Close]

BLAST of CsaV3_3G035550 vs. NCBI nr
Match: TYK25106.1 (nuclear pore complex protein NUP62 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 906.0 bits (2340), Expect = 1.8e-259
Identity = 511/604 (84.60%), Postives = 522/604 (86.42%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFED            
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFED------------ 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
                                           MKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 --------------------------------MKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQ   AVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQ---AVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 557

[Close]

BLAST of CsaV3_3G035550 vs. NCBI nr
Match: XP_038905781.1 (nucleolar protein dao-5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 902.1 bits (2330), Expect = 2.6e-258
Identity = 501/604 (82.95%), Postives = 532/604 (88.08%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDIT EDEEHD +RQ G +D
Sbjct: 1   MDAVGTDHDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITKEDEEHDSMRQLGTVD 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
            SRI+ER D FEQRED+PQL+ SSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  SSRIEERNDAFEQREDEPQLLSSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SM+APVGR+EKR LPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMMAPVGRSEKRALPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKV  GRQEA+KPPS GRLDLTSQNKMKDRSASSKL D LQGPG+TIKQNS+QP
Sbjct: 181 GKANSRTKVGSGRQEAEKPPSQGRLDLTSQNKMKDRSASSKLNDGLQGPGRTIKQNSTQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           R GQQLKAVGRLP +S+S+K+PSLGHNP ATAKDGTISG  PADRRDSVSLRTTAHRP R
Sbjct: 241 RAGQQLKAVGRLPPNSVSTKRPSLGHNPRATAKDGTISGAGPADRRDSVSLRTTAHRPAR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           IS++AKS QKTSS VSTSSSDKVGKSSSKDVRKKTE KALPSSG QKTPS+V SKVTSP 
Sbjct: 301 ISSAAKSEQKTSSQVSTSSSDKVGKSSSKDVRKKTESKALPSSGTQKTPSQVASKVTSPI 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKF+SGISPASSISEWST SSS         SPRV L SISSK ISTDS+ASHD
Sbjct: 361 GKSRLSSKFSSGISPASSISEWSTGSSSNSTLEQRSNSPRVRLQSISSKIISTDSDASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHP GPHTQTTGLLSQSVKK SSQSS+ PPAS+KPSGLRLPSPKIGYFDG KTSS KS
Sbjct: 421 GRNHPGGPHTQTTGLLSQSVKKTSSQSSV-PPASMKPSGLRLPSPKIGYFDGGKTSSMKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           N AVPGGMTKIGAGN STNGG+SK KPSKLQPAR+LPKSTTR N  P MN+KS K SATK
Sbjct: 481 NPAVPGGMTKIGAGNGSTNGGQSKAKPSKLQPARMLPKSTTRGNTHPNMNMKSRKPSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSK   +DQ+V+EL REGS  DLHDSDACAE    SGA+RE+M KENEACSN NET T N
Sbjct: 541 MSKINEIDQEVEELCREGSKADLHDSDACAEGYRNSGALREKMIKENEACSNTNETTTAN 600

[Close]

BLAST of CsaV3_3G035550 vs. ExPASy TrEMBL
Match: A0A0A0LAC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736830 PE=4 SV=1)

HSP 1 Score: 1143.6 bits (2957), Expect = 0.0e+00
Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID
Sbjct: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT
Sbjct: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP
Sbjct: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF
Sbjct: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPH 420
           GKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPH
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHDGRNHPVGPH 420

Query: 421 TQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMT 480
           TQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMT
Sbjct: 421 TQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKSNLAVPGGMT 480

Query: 481 KIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKV 540
           KIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKV
Sbjct: 481 KIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKMSKTKALDQKV 540

Query: 541 KELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHR 600
           KELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHR
Sbjct: 541 KELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTNSAGENLTTIHR 600

Query: 601 TSRPNVDGMVIGSISKK 618
           TSRPNVDGMVIGSISKK
Sbjct: 601 TSRPNVDGMVIGSISKK 617

[Close]

BLAST of CsaV3_3G035550 vs. ExPASy TrEMBL
Match: A0A5A7TL81 (Nuclear pore complex protein NUP62 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003810 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 1.1e-291
Identity = 556/604 (92.05%), Postives = 568/604 (94.04%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVE GRQEA+KPPSAGRLDLTSQNKMKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 GKANSRTKVESGRQEARKPPSAGRLDLTSQNKMKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQQLKAVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQQLKAVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 600

[Close]

BLAST of CsaV3_3G035550 vs. ExPASy TrEMBL
Match: A0A1S3B662 (nuclear pore complex protein NUP62 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486453 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 1.1e-291
Identity = 556/604 (92.05%), Postives = 568/604 (94.04%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVE GRQEA+KPPSAGRLDLTSQNKMKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 GKANSRTKVESGRQEARKPPSAGRLDLTSQNKMKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQQLKAVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQQLKAVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 600

[Close]

BLAST of CsaV3_3G035550 vs. ExPASy TrEMBL
Match: A0A1S3B670 (nuclear pore complex protein NUP62 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486453 PE=4 SV=1)

HSP 1 Score: 1001.5 bits (2588), Expect = 1.5e-288
Identity = 553/604 (91.56%), Postives = 565/604 (93.54%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
           GKANSRTKVE GRQEA+KPPSAGRLDLTSQNKMKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 GKANSRTKVESGRQEARKPPSAGRLDLTSQNKMKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQ   AVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQ---AVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 600

[Close]

BLAST of CsaV3_3G035550 vs. ExPASy TrEMBL
Match: A0A5D3DN95 (Nuclear pore complex protein NUP62 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002300 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 8.7e-260
Identity = 511/604 (84.60%), Postives = 522/604 (86.42%), Query Frame = 0


Query: 1   MDAVGADPDRRFCRLSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAID 60
           MDAVG D DRRFCRLSLIDFASEDDFLLPSPSCDLHDV+SLDITNED+EHD+IRQS AID
Sbjct: 1   MDAVGTDTDRRFCRLSLIDFASEDDFLLPSPSCDLHDVNSLDITNEDDEHDKIRQSEAID 60

Query: 61  CSRIDERTDGFEQREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFT 120
           CSRI ERTD FEQREDK QL+PSSEPE I+RNGKYNLRKSLAWDSAFFTSAGFLDPEE T
Sbjct: 61  CSRIQERTDAFEQREDKAQLLPSSEPEGIRRNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIV 180
           SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFED            
Sbjct: 121 SMIAPVGRNEKRVLPIISEDVQKSSDSISTLESEIMPLESIEGNLFED------------ 180

Query: 181 GKANSRTKVEPGRQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNSSQP 240
                                           MKD SASSKLPDALQGPG+TIKQNSSQP
Sbjct: 181 --------------------------------MKDSSASSKLPDALQGPGRTIKQNSSQP 240

Query: 241 RGGQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300
           RGGQ   AVGRLPSSSLSSK+PSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR
Sbjct: 241 RGGQ---AVGRLPSSSLSSKRPSLGHNPTATAKDGTISGTRPADRRDSVSLRTTAHRPTR 300

Query: 301 ISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTPSRVTSKVTSPF 360
           ISTSAKS QKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQ TPSRV SKVTSPF
Sbjct: 301 ISTSAKSGQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQNTPSRVASKVTSPF 360

Query: 361 GKSRLSSKFASGISPASSISEWSTESSS---------SPRVSLHSISSKRISTDSEASHD 420
           GKSRLSSKFASGISPASSISEWSTESSS         SPRVSL S+SSKRISTDSEASHD
Sbjct: 361 GKSRLSSKFASGISPASSISEWSTESSSNSTLELRSNSPRVSLRSLSSKRISTDSEASHD 420

Query: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASVKPSGLRLPSPKIGYFDGSKTSSTKS 480
           GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS KPSGLRLPSPKIGYFDGSKTSS KS
Sbjct: 421 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPASTKPSGLRLPSPKIGYFDGSKTSSPKS 480

Query: 481 NLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRAN--PTMNLKSHKSSATK 540
           NLAVPGG TKIGAGNVSTNGGESKIKPSKLQPARLLPKS TRAN  PTMNLKSHKSSATK
Sbjct: 481 NLAVPGGTTKIGAGNVSTNGGESKIKPSKLQPARLLPKSATRANIHPTMNLKSHKSSATK 540

Query: 541 MSKTKALDQKVKELHREGSNTDLHDSDACAESNDISGAMREEMTKENEACSNANETLTTN 594
           MSKT ALDQKVKELHREGSNTDLH SDACAES DISGA REE+TKENE+ SNANET+ TN
Sbjct: 541 MSKTNALDQKVKELHREGSNTDLHGSDACAESKDISGATREELTKENESFSNANETVATN 557

[Close]

BLAST of CsaV3_3G035550 vs. TAIR 10
Match: AT3G53320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-38
Identity = 162/514 (31.52%), Postives = 256/514 (49.81%), Query Frame = 0


Query: 15  LSLIDFASEDDFLLPSPSCDLHDVSSLD-ITNEDEEHDRIRQSGAIDCSRIDE-RTDGFE 74
           L LID A EDD LL S   +  +    D    ED++ + +R +   D    DE      E
Sbjct: 16  LGLIDVAVEDDSLLFS---EFSETDKDDKCLKEDKDLNFMRDTQYCD----DEILASSVE 75

Query: 75  QREDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFTSMIAPVGRNEKR 134
           ++E+  Q   S EPE + + GKYNLRKSLAWD+ FFTSAG L+PEE +SM+    ++ K+
Sbjct: 76  EKEEVLQPHESPEPEKVMKKGKYNLRKSLAWDNEFFTSAGVLEPEELSSMMESNHKSGKK 135

Query: 135 VLPIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRIVGKANSRTKVEPG 194
            LP I ED+ +S++SIST +S+     S E  LFEDVRASIQ+S++    A         
Sbjct: 136 ALPTILEDINRSTESISTFQSDCTVENSQEFVLFEDVRASIQRSAKTSDVATPGKSNVLR 195

Query: 195 RQEAQKPPSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQN----------SSQPRG 254
             +    P++  +D+T+         S + P  +QGPGK  KQ           S  P G
Sbjct: 196 ATDVAISPTSSTVDVTATQGKTKSKGSPRNPSRVQGPGKATKQPVATRGLSTSISKPPNG 255

Query: 255 GQQLKAVGRLPSSSLSSKKPSLGHNPTATAKDGTI-SGTRPADRRDSVSLRTTAHRP--- 314
             +++     P S+ S+ + SL  + T   K+  + +G  P   R S+S R     P   
Sbjct: 256 LSKVR-----PLSTTSTNRSSLDISKTQQEKNSKLPAGKEPLGPRISMSRRAKPVLPKPG 315

Query: 315 TRISTSAKSAQKTSSDVSTS----------SSDKVGKSSSKDVRKKTECKALPSS----- 374
               +S++S+  + +++++S          SS    K S   ++KK +  +  SS     
Sbjct: 316 VPFKSSSRSSDASKNEMTSSCSSLESCASASSSASHKPSIDSIKKKNDSSSRLSSQPLAN 375

Query: 375 --------GVQKTPSRVTSKVTSPFGKSRLSSKFASGISPASSISEWSTESSSSPRVS-L 434
                   G  + P + T+K + P        K +S +  A SIS++S+ESS +   S +
Sbjct: 376 RSTSRGIMGQPRIPPQQTNKTSKP--------KLSSSVPTAGSISDYSSESSRASETSKM 435

Query: 435 HSISSKRISTDSEASHDGRNHPVGP--HTQTTGLLSQSVKKASSQSS-----ILPPASVK 482
            + + K +S +   ++D     V P  +++ T ++    K+ + + S     ++P AS K
Sbjct: 436 ANGNQKTVSREKVPANDNTVQTVKPLKNSKDTSVVQADAKEGTKRVSAINGGLVPSASAK 495

[Close]

BLAST of CsaV3_3G035550 vs. TAIR 10
Match: AT2G37070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-19
Identity = 155/546 (28.39%), Postives = 250/546 (45.79%), Query Frame = 0


Query: 15  LSLIDFASEDDFLLPSPSCDLHDVSSLDITNEDEEHDRIRQSGAIDCSRIDERTDGFEQR 74
           LSLIDF++EDD LL S      D ++ D ++ D+E   +   G    +  DE T G    
Sbjct: 18  LSLIDFSAEDDNLLLS---SFLDPTTFDFSDTDKEDRGLCLFGDTH-NCCDEETLGSTTL 77

Query: 75  EDKPQLVPSSEPEAIKRNGKYNLRKSLAWDSAFFTSAGFLDPEEFTSMIAPVGRNEKRVL 134
           E+K       EP  I    K NLRKSLAWD AFFT+AG L+P+E +SM+       ++ L
Sbjct: 78  EEK-------EPHKIM---KTNLRKSLAWDKAFFTNAGVLEPDELSSMMG------RKSL 137

Query: 135 PIISEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQK---SSRIVGKANSRTKVEP 194
           P + ED+ +S++S+STL+S+       E  + +      +K   S+  V    + T  +P
Sbjct: 138 PAVQEDLHRSTESMSTLKSDCTVETGQEFFMCDAATPDKRKDLGSTEAVPSPTTSTLDDP 197

Query: 195 GRQEAQKP-PSAGRLDLTSQNKMKDRSASSKLPDALQGPGKTIKQNS---SQPRGGQQLK 254
             +E  KP P   R  + SQ   K    ++K P A +    +I + S   ++P  G    
Sbjct: 198 SSEEKMKPNPIRKRPGIRSQGLAK----ATKHPVASEEHNTSISRPSTGLNRPSSG---- 257

Query: 255 AVGRLPSSSLSSKKPSLGHNPTATAKDGTISGTRPADRRD-----------SVSLRTTAH 314
            + +   +S+ + K     NP ++     ++   P  RR              +LR++  
Sbjct: 258 -LSKTKRASVDTNKAKQETNPKSSGGKEPLASRVPISRRPRPIVSTPVVPFKSALRSSVA 317

Query: 315 RPTRISTSAKSAQKTSSDVSTSSSDKVGKSSSKDVRKKTECKALPSSGVQKTP-----SR 374
               +++S  S +   S VS+++S+K    S K  +KK +   + S  +   P     SR
Sbjct: 318 SKNELTSSCSSIESCLS-VSSTASNKPSIHSVK--QKKDQSLRIASHSLANRPKSSAGSR 377

Query: 375 VTSKVTSPFGKSRLSSKFASGISPASSISEWSTESSSSPRVSLHSISSKRISTDSEASHD 434
              ++  P   +  + KF   +S  SS  +WS+E   SPR       +K    + ++ H 
Sbjct: 378 NIDQLKVPPVSAGRTYKF--NVSRLSSSVDWSSE---SPRA---FTPNKMAKGNKKSVHG 437

Query: 435 GRNHPVGPHTQTTGLLSQSVKKASSQSSILPPAS-VKPSGLRLPSPKIGYFDGSKTSSTK 494
               P    TQT   L+ S   +  Q    P AS +KP+GLR+PSPK+GYFDG++ S  +
Sbjct: 438 DNGPPTDYTTQTLKPLNNSKDVSVVQDDPKPSASMMKPTGLRVPSPKVGYFDGARGSVAR 497

Query: 495 SNLAVPGGMTKIGAGNVSTNGGESKIKPSKLQPARLLPKSTTRANPTMNLKSHKSSATKM 537
           +    P G        +S +G  S        P    P  T ++ PTM+    K++   +
Sbjct: 498 T----PTGSCTGPVSGLSKHGACS--------PDEFTPSRTAKSQPTMS----KAAVRPV 507

The following BLAST results are available for this feature:

BLAST of CsaV3_3G035550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137963.1	0.0e+00	100.00	nucleolar protein dao-5 [Cucumis sativus] >KGN58935.1 hypothetical protein Csa_0...	[more]
XP_008442645.1	2.3e-291	92.05	PREDICTED: nuclear pore complex protein NUP62 isoform X1 [Cucumis melo] >KAA0044...	[more]
XP_008442646.1	3.2e-288	91.56	PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Cucumis melo]	[more]
TYK25106.1	1.8e-259	84.60	nuclear pore complex protein NUP62 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_038905781.1	2.6e-258	82.95	nucleolar protein dao-5-like isoform X1 [Benincasa hispida]	[more]

BLAST of CsaV3_3G035550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G035550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAC4	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736830 PE=4 SV=1	[more]
A0A5A7TL81	1.1e-291	92.05	Nuclear pore complex protein NUP62 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B662	1.1e-291	92.05	nuclear pore complex protein NUP62 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3B670	1.5e-288	91.56	nuclear pore complex protein NUP62 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5D3DN95	8.7e-260	84.60	Nuclear pore complex protein NUP62 isoform X2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of CsaV3_3G035550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53320.1	1.5e-38	31.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G37070.1	1.2e-19	28.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 569..589
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..475
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..444
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..276
None	No IPR available	PANTHER	PTHR33737:SF2	OS05G0121800 PROTEIN	coord: 2..594
None	No IPR available	PANTHER	PTHR33737	OS05G0121800 PROTEIN	coord: 2..594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G035550.1	CsaV3_3G035550.1	mRNA