CsaV3_3G035500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G035500
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 29758845 .. 29760250 (+)
RNA-Seq ExpressionCsaV3_3G035500
SyntenyCsaV3_3G035500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATTGAGCAAAGTTTTCGACATGGTAAAAGAGATTGAGTTATATAGTATGTCATATAATTCTATTATACGAGAAAGGTTAGTCCACTATTTTTACTCTATGTTGAACTCGTATAATTTTATTATTCGTAAAGAAAAAATCACCTAATATAATTCATTTAAAGAAAAATGACTGATAGATAAATGATATGCACAATATTTAAGGCTAAAATTTAAGAAAAACAATCTTATCACAAATAAAAAGTGTTTATTTTTTAAAATTATATCTTTTACGAACTTTCAAGGTATGAATAAGCAAAACATTGTATAGATGAAAATGATTATTTTTTTAAAATTTTGAATATAAAAAAAGAAAAATTGAAATAATTTACAAAATATAATAAAATTTTACCAATTCCACGTGTATAGGGAAAAAAATCTATTAAAATAATATATTTTGAAAATATGAACATTTTGATTAAACGAAGAATAATATAAAAAGAATAAAACCTAAAAAGATAAAAAATGAAAATAAATAACAATAAAAAATATTTTGATCAAAATATATTCACTCTCTCTCAGTCTTTCATATATATCTTTTAAGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCGTCGACGTCAAAAGAGCTTTTACAATTTCGATCACCGATAAAAGCATCTGCGGTGAGAGTTGCGTTCCGCCGTCGACGGAGAATTTTTCTCGCTCACAAACTTCCGTATTTTTTCATCGTGCTTTTGGAATTTCGTGAGTCTTCGGTTTGCAGCGCTAAGGTACTGAGAAATATAACATAGTTTTCTCTTGTCTGATCGTAAATCCGTCTTTACATTCGTGATTTTTGATCTCGTTCTTCATCGCATTCGCTTTGGCTTTCGTATTTTTTGGCTGATAAAAGAGGACTAGTTACGACTTACGAGCTTACTAGAGAAACTTAGTTATGTGTTCAAGATTGTCTAGCGTATATAATAGAAGTTTTATTTGTCAATGGTGGTTTAATCCGTGGATTTTTCGGGTCCTGTGTTAGTCTAGGAGCAGTAGAGGTTCGTTTATTTTTGTTCAAATTGACGGTGAATATAGTTTATTTTATATTTAGCTTTTATGGTTTGAGACAGACAATTCTCAGTGGAATGTTCCAATTTCTATCAGATTATCATGTGAGTTGCGGATTGGAATGTTCACCTCTGAGTGCTTTTTAATCTATTGAAGTGAAATTGTTAGTGTTGAGCTAAAATACTGTTTGTTCTCGTGTCTTTTATTTAATGTTTTTCTTGCTGTGTAGTTTGGTTCTGATCATTGATAATATGTAAATTGTTGAAGCACAAAAGTTTGGCAATCTTATGCAATGTTGGATCTCTTGATTATATAGGAAGGTGTTTACTCTATTAGAGCTAATAAATGA

mRNA sequence

ATGTCCATTGAGCAAAGTTTTCGACATGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCGTCGACGTCAAAAGAGCTTTTACAATTTCGATCACCGATAAAAGCATCTGCGGTGAGAGTTGCGTTCCGCCGTCGACGGAGAATTTTTCTCGCTCACAAACTTCCGTATTTTTTCATCGTGCTTTTGGAATTTCGTGAGTCTTCGGTTTGCAGCGCTAAGGAAGGTGTTTACTCTATTAGAGCTAATAAATGA

Coding sequence (CDS)

ATGTCCATTGAGCAAAGTTTTCGACATGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCGTCGACGTCAAAAGAGCTTTTACAATTTCGATCACCGATAAAAGCATCTGCGGTGAGAGTTGCGTTCCGCCGTCGACGGAGAATTTTTCTCGCTCACAAACTTCCGTATTTTTTCATCGTGCTTTTGGAATTTCGTGAGTCTTCGGTTTGCAGCGCTAAGGAAGGTGTTTACTCTATTAGAGCTAATAAATGA

Protein sequence

MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFIVLLEFRESSVCSAKEGVYSIRANK*
Homology
[Close]
BLAST of CsaV3_3G035500 vs. NCBI nr
Match: KGN58931.1 (hypothetical protein Csa_001835 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 6.5e-35
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI 60
          MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI
Sbjct: 1  MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI 60

Query: 61 VLLEFRESSVCSAKEGVYSIRANK 85
          VLLEFRESSVCSAKEGVYSIRANK
Sbjct: 61 VLLEFRESSVCSAKEGVYSIRANK 84

[Close]
BLAST of CsaV3_3G035500 vs. ExPASy TrEMBL
Match: A0A0A0LFP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736790 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-35
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI 60
          MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI
Sbjct: 1  MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI 60

Query: 61 VLLEFRESSVCSAKEGVYSIRANK 85
          VLLEFRESSVCSAKEGVYSIRANK
Sbjct: 61 VLLEFRESSVCSAKEGVYSIRANK 84

The following BLAST results are available for this feature:
BLAST of CsaV3_3G035500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58931.16.5e-35100.00hypothetical protein Csa_001835 [Cucumis sativus][more]
BLAST of CsaV3_3G035500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G035500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFP63.2e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736790 PE=4 SV=1[more]
BLAST of CsaV3_3G035500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G035500.1CsaV3_3G035500.1mRNA