CsaV3_3G035280 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G035280
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionRING-type domain-containing protein
Locationchr3: 29644302 .. 29645153 (+)
RNA-Seq ExpressionCsaV3_3G035280
SyntenyCsaV3_3G035280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAATTAGAGCCTCCGTCAGTAATTACGGCCGCCCTTGCTACCCTCTCTCCGCCGCGTCTCGCCGATCTCTCCCACTCAATTTTCTCCGAGATTCACCAACACCGCCGCCGTCTCACCTTCATTCTCTCTTCCCCTACCCTCTTCTCCCTCACTCTCCGTCACCTCAATTCCCTCTCCCTCTCCCACAAATCTCTCCTCCTCGCCCGTTTCCTCCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGTCACCGTCCAAGCTACTCCCTTACCACCCTTCCACCGCTGCCATCTCCCCTCAAGACCTCGACGCTGCCGTCCTCCTCCTCCTCCTCTGCGAGGTCCGGCAACACAATCCAGCCGCCCTCCGAACTCCGATCACCAAATGGCGTGCGACCCTTTGTAAAATCTACTCCGATTCCCTCTTGACGGTCTCCGGACTCGCCACCGGCGGAGGCGGGGCTTTGATTCCGTACATTGACACGGTGGTGAGGTGTTGGAAATTCGTGGGGTTTGTTGGTAGTTGCGGAGGGAAGGTTCGGAGAGAGGTGGCGGCGTCACCTATGGCGGTGGTGGAGCTACCGTCAGTGGCGGTGGGTGGTGGCGGTGCGGCGGTGGAATGTGTGATATGTAAAGAGGAGATGGGAGAAGGAAGAGACGCGTGTAAATTGCCTTGTGACCACTTATTCCATTGGCTATGTATTTTGCCATGGCTTAGGAAGAGAAACACCTGTCCTTGTTGTAGGTTTCAGCTTCCTACTGATGATGTTTTGGGAGAGATCCAACGTCTATGGGAGATCCTCTTCAAGGTGGGATCCACCATGTGTACATCTGATGGAGATTAA

mRNA sequence

ATGGAAGAATTAGAGCCTCCGTCAGTAATTACGGCCGCCCTTGCTACCCTCTCTCCGCCGCGTCTCGCCGATCTCTCCCACTCAATTTTCTCCGAGATTCACCAACACCGCCGCCGTCTCACCTTCATTCTCTCTTCCCCTACCCTCTTCTCCCTCACTCTCCGTCACCTCAATTCCCTCTCCCTCTCCCACAAATCTCTCCTCCTCGCCCGTTTCCTCCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGTCACCGTCCAAGCTACTCCCTTACCACCCTTCCACCGCTGCCATCTCCCCTCAAGACCTCGACGCTGCCGTCCTCCTCCTCCTCCTCTGCGAGGTCCGGCAACACAATCCAGCCGCCCTCCGAACTCCGATCACCAAATGGCGTGCGACCCTTTGTAAAATCTACTCCGATTCCCTCTTGACGGTCTCCGGACTCGCCACCGGCGGAGGCGGGGCTTTGATTCCGTACATTGACACGGTGGTGAGGTGTTGGAAATTCGTGGGGTTTGTTGGTAGTTGCGGAGGGAAGGTTCGGAGAGAGGTGGCGGCGTCACCTATGGCGGTGGTGGAGCTACCGTCAGTGGCGGTGGGTGGTGGCGGTGCGGCGGTGGAATGTGTGATATGTAAAGAGGAGATGGGAGAAGGAAGAGACGCGTGTAAATTGCCTTGTGACCACTTATTCCATTGGCTATGTATTTTGCCATGGCTTAGGAAGAGAAACACCTGTCCTTGTTGTAGGTTTCAGCTTCCTACTGATGATGTTTTGGGAGAGATCCAACGTCTATGGGAGATCCTCTTCAAGGTGGGATCCACCATGTGTACATCTGATGGAGATTAA

Coding sequence (CDS)

ATGGAAGAATTAGAGCCTCCGTCAGTAATTACGGCCGCCCTTGCTACCCTCTCTCCGCCGCGTCTCGCCGATCTCTCCCACTCAATTTTCTCCGAGATTCACCAACACCGCCGCCGTCTCACCTTCATTCTCTCTTCCCCTACCCTCTTCTCCCTCACTCTCCGTCACCTCAATTCCCTCTCCCTCTCCCACAAATCTCTCCTCCTCGCCCGTTTCCTCCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGTCACCGTCCAAGCTACTCCCTTACCACCCTTCCACCGCTGCCATCTCCCCTCAAGACCTCGACGCTGCCGTCCTCCTCCTCCTCCTCTGCGAGGTCCGGCAACACAATCCAGCCGCCCTCCGAACTCCGATCACCAAATGGCGTGCGACCCTTTGTAAAATCTACTCCGATTCCCTCTTGACGGTCTCCGGACTCGCCACCGGCGGAGGCGGGGCTTTGATTCCGTACATTGACACGGTGGTGAGGTGTTGGAAATTCGTGGGGTTTGTTGGTAGTTGCGGAGGGAAGGTTCGGAGAGAGGTGGCGGCGTCACCTATGGCGGTGGTGGAGCTACCGTCAGTGGCGGTGGGTGGTGGCGGTGCGGCGGTGGAATGTGTGATATGTAAAGAGGAGATGGGAGAAGGAAGAGACGCGTGTAAATTGCCTTGTGACCACTTATTCCATTGGCTATGTATTTTGCCATGGCTTAGGAAGAGAAACACCTGTCCTTGTTGTAGGTTTCAGCTTCCTACTGATGATGTTTTGGGAGAGATCCAACGTCTATGGGAGATCCTCTTCAAGGTGGGATCCACCATGTGTACATCTGATGGAGATTAA

Protein sequence

MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD*
Homology
BLAST of CsaV3_3G035280 vs. NCBI nr
Match: XP_004137953.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis sativus] >KGN58913.1 hypothetical protein Csa_002303 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH
Sbjct: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG
Sbjct: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW
Sbjct: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 283

BLAST of CsaV3_3G035280 vs. NCBI nr
Match: XP_016899723.1 (PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis melo])

HSP 1 Score: 561.2 bits (1445), Expect = 5.0e-156
Identity = 274/283 (96.82%), Postives = 278/283 (98.23%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEELEPPSVI AALATLSPPRL DLSHSIFSE+HQHRRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 1   MEELEPPSVIMAALATLSPPRLTDLSHSIFSEVHQHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH
Sbjct: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAALRTPITKWRATLC+IYS+SLLT+SGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG
Sbjct: 121 NPAALRTPITKWRATLCRIYSESLLTISGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           KVRREVAASPMAVVELPSVAVGGGG  VECVICKEEMGEGRDACKLPCDHLFHWLCILPW
Sbjct: 181 KVRREVAASPMAVVELPSVAVGGGGGTVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDDV GEIQRLWEILFKVGSTMCTSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDVFGEIQRLWEILFKVGSTMCTSDGD 283

BLAST of CsaV3_3G035280 vs. NCBI nr
Match: KAA0044054.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis melo var. makuwa] >TYK25081.1 E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis melo var. makuwa])

HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150
Identity = 264/272 (97.06%), Postives = 268/272 (98.53%), Query Frame = 0

Query: 12  AALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLAR 71
           AALATLSPPRL DLSHSIFSE+HQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLAR
Sbjct: 2   AALATLSPPRLTDLSHSIFSEVHQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLAR 61

Query: 72  FLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITK 131
           FLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITK
Sbjct: 62  FLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITK 121

Query: 132 WRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPM 191
           WRATLC+IYS+SLLT+SGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPM
Sbjct: 122 WRATLCRIYSESLLTISGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPM 181

Query: 192 AVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCR 251
           AVVELPSVAVGGGG  VECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCR
Sbjct: 182 AVVELPSVAVGGGGGTVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCR 241

Query: 252 FQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           FQLPTDDV GEIQRLWEILFKVGSTMCTSDGD
Sbjct: 242 FQLPTDDVFGEIQRLWEILFKVGSTMCTSDGD 273

BLAST of CsaV3_3G035280 vs. NCBI nr
Match: XP_038905798.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Benincasa hispida])

HSP 1 Score: 528.5 bits (1360), Expect = 3.6e-146
Identity = 257/283 (90.81%), Postives = 269/283 (95.05%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           ME+LEPP+VI AAL+ LSPP L+DLSHSIFS+IH HRRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 1   MEKLEPPTVIMAALSALSPPSLSDLSHSIFSDIHLHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLLLARFLLS LRRLS PFQS SKL P+HPSTA ISPQDLDAAVLLLLLCEVRQH
Sbjct: 61  SLSHKSLLLARFLLSTLRRLSCPFQSQSKLFPHHPSTATISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAALRTPITKWRATLC+IYSDSLLT+SG+ATGGGGALIPYI+TVVRCWKFVGFVGSCGG
Sbjct: 121 NPAALRTPITKWRATLCRIYSDSLLTISGIATGGGGALIPYIETVVRCWKFVGFVGSCGG 180

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           K RREVAASP+AVVELPSVAVGGGGA VECVICKEEM EGRDACKLPCDHLFHWLCILPW
Sbjct: 181 KARREVAASPVAVVELPSVAVGGGGALVECVICKEEMVEGRDACKLPCDHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDD+ GEIQRLWEIL KVGSTMCTSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDIFGEIQRLWEILLKVGSTMCTSDGD 283

BLAST of CsaV3_3G035280 vs. NCBI nr
Match: XP_022145706.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Momordica charantia])

HSP 1 Score: 477.2 bits (1227), Expect = 9.5e-131
Identity = 230/283 (81.27%), Postives = 255/283 (90.11%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEELEPP+VI AAL+ LSP  L+DLSHSIFS+IH  RRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 30  MEELEPPTVIMAALSALSPLHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSL 89

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLL+ARFLLSALRRL  PFQ P+K LP HPSTAAI+P+DLDAAVLLLLLCEVRQH
Sbjct: 90  SLSHKSLLIARFLLSALRRLCHPFQPPAKSLPQHPSTAAITPRDLDAAVLLLLLCEVRQH 149

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAAL TP+ KWRA LC+IYSDS+L++SG+ +GGG  ++PY++TV RCWKFVGFVGSCGG
Sbjct: 150 NPAALETPLPKWRAALCRIYSDSILSISGIISGGGAVMVPYVETVARCWKFVGFVGSCGG 209

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           K +REVAASP+AVVELPSVA     AAVECVICKEEMGEGRDAC+LPC+HLFHWLCILPW
Sbjct: 210 KGKREVAASPVAVVELPSVA---AAAAVECVICKEEMGEGRDACQLPCEHLFHWLCILPW 269

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDDV  EIQRLWEIL K+GST+ TSDGD
Sbjct: 270 LRKRNTCPCCRFQLPTDDVFAEIQRLWEILLKLGSTITTSDGD 309

BLAST of CsaV3_3G035280 vs. ExPASy Swiss-Prot
Match: Q8GXF8 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SGR9 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-65
Identity = 147/283 (51.94%), Postives = 177/283 (62.54%), Query Frame = 0

Query: 3   ELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSLSL 62
           E E  ++I A+L+ LSP  L +L+HSI S  H HRRRL  +LSSPTLFSLTLRHL SLSL
Sbjct: 2   EDENTTIIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRHLLSLSL 61

Query: 63  SHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISP--QDLDAAVLLLLLCEVRQH 122
             K+ L+A  LLS L         P  +   H S+ A++   +DLDA VLLL LCE  Q 
Sbjct: 62  PDKTHLIANHLLSLLH--------PLLIHRKHHSSYAVTMKLRDLDAVVLLLFLCETHQL 121

Query: 123 NPAALRTPITKWRATLCKIYSDSLLT-VSGLATGGGGALIPYIDTVVRCWKFVGFVGSCG 182
           +P  L      WR  L   YS+++L+  SGL T   G L+PYI+T+VRC +FV  +G   
Sbjct: 122 HPDVLEASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPYIETLVRCKRFVDIMGGYN 181

Query: 183 GKVRR------EVAASPMAVVELPSVAV----GGGGAAVECVICKEEMGEGRDACKLPCD 242
              RR      +V A+  AVV L +V V          VECVICKEEM EGRD C++PC 
Sbjct: 182 HLRRRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEMSEGRDVCEMPCQ 241

Query: 243 HLFHWLCILPWLRKRNTCPCCRFQLPTDDVLGEIQRLWEILFK 273
           H FHW CILPWL K+NTCP CRFQLPTDDV  EIQRLWEIL K
Sbjct: 242 HFFHWKCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

BLAST of CsaV3_3G035280 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.4e-14
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 188 ASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTC 247
           A+   V  LP   + G  A ++C +C  E  E   A ++PC HLFH  CILPWL K N+C
Sbjct: 54  AAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSC 113

Query: 248 PCCRFQLPTDD 259
           P CR++LPTDD
Sbjct: 114 PLCRYELPTDD 124

BLAST of CsaV3_3G035280 vs. ExPASy Swiss-Prot
Match: Q3T0W3 (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.4e-14
Identity = 35/71 (49.30%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 188 ASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTC 247
           A+  AV  LP   + G  A ++C +C  E  E   A ++PC HLFH  CILPWL K N+C
Sbjct: 54  AAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSC 113

Query: 248 PCCRFQLPTDD 259
           P CR +LPTDD
Sbjct: 114 PLCRHELPTDD 124

BLAST of CsaV3_3G035280 vs. ExPASy Swiss-Prot
Match: Q9SPL2 (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.8e-13
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0

Query: 176 GSCGGKVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWL 235
           G  G +     A S +  +E   V+   G   + C +CK+ M  G    KLPC H +H  
Sbjct: 223 GGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGD 282

Query: 236 CILPWLRKRNTCPCCRFQLPTDDVLGEIQR 266
           CI+PWL  RN+CP CRFQL TDD   E +R
Sbjct: 283 CIVPWLGTRNSCPVCRFQLETDDAEYEEER 312

BLAST of CsaV3_3G035280 vs. ExPASy Swiss-Prot
Match: Q6GPV5 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.8e-13
Identity = 37/72 (51.39%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 188 ASPMAVVELPSVAV--GGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRN 247
           AS   V  LP V V      AA++C +C  E  EG    +LPC+HLFH  CILPWL K N
Sbjct: 55  ASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTN 114

Query: 248 TCPCCRFQLPTD 258
           +CP CR +LPTD
Sbjct: 115 SCPLCRHELPTD 126

BLAST of CsaV3_3G035280 vs. ExPASy TrEMBL
Match: A0A0A0LAQ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736610 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.2e-160
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH
Sbjct: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG
Sbjct: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW
Sbjct: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 283

BLAST of CsaV3_3G035280 vs. ExPASy TrEMBL
Match: A0A1S4DUS9 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo OX=3656 GN=LOC103486430 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.4e-156
Identity = 274/283 (96.82%), Postives = 278/283 (98.23%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEELEPPSVI AALATLSPPRL DLSHSIFSE+HQHRRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 1   MEELEPPSVIMAALATLSPPRLTDLSHSIFSEVHQHRRRLTFILSSPTLFSLTLRHLNSL 60

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH
Sbjct: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAALRTPITKWRATLC+IYS+SLLT+SGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG
Sbjct: 121 NPAALRTPITKWRATLCRIYSESLLTISGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           KVRREVAASPMAVVELPSVAVGGGG  VECVICKEEMGEGRDACKLPCDHLFHWLCILPW
Sbjct: 181 KVRREVAASPMAVVELPSVAVGGGGGTVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDDV GEIQRLWEILFKVGSTMCTSDGD
Sbjct: 241 LRKRNTCPCCRFQLPTDDVFGEIQRLWEILFKVGSTMCTSDGD 283

BLAST of CsaV3_3G035280 vs. ExPASy TrEMBL
Match: A0A5A7TLA8 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002040 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.8e-151
Identity = 264/272 (97.06%), Postives = 268/272 (98.53%), Query Frame = 0

Query: 12  AALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLAR 71
           AALATLSPPRL DLSHSIFSE+HQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLAR
Sbjct: 2   AALATLSPPRLTDLSHSIFSEVHQHRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLLAR 61

Query: 72  FLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITK 131
           FLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITK
Sbjct: 62  FLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQHNPAALRTPITK 121

Query: 132 WRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPM 191
           WRATLC+IYS+SLLT+SGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPM
Sbjct: 122 WRATLCRIYSESLLTISGLATGGGGALIPYIDTVVRCWKFVGFVGSCGGKVRREVAASPM 181

Query: 192 AVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCR 251
           AVVELPSVAVGGGG  VECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCR
Sbjct: 182 AVVELPSVAVGGGGGTVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCR 241

Query: 252 FQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           FQLPTDDV GEIQRLWEILFKVGSTMCTSDGD
Sbjct: 242 FQLPTDDVFGEIQRLWEILFKVGSTMCTSDGD 273

BLAST of CsaV3_3G035280 vs. ExPASy TrEMBL
Match: A0A6J1CX45 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Momordica charantia OX=3673 GN=LOC111015097 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.6e-131
Identity = 230/283 (81.27%), Postives = 255/283 (90.11%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEELEPP+VI AAL+ LSP  L+DLSHSIFS+IH  RRRLTFILSSPTLFSLTLRHLNSL
Sbjct: 30  MEELEPPTVIMAALSALSPLHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSL 89

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLL+ARFLLSALRRL  PFQ P+K LP HPSTAAI+P+DLDAAVLLLLLCEVRQH
Sbjct: 90  SLSHKSLLIARFLLSALRRLCHPFQPPAKSLPQHPSTAAITPRDLDAAVLLLLLCEVRQH 149

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSCGG 180
           NPAAL TP+ KWRA LC+IYSDS+L++SG+ +GGG  ++PY++TV RCWKFVGFVGSCGG
Sbjct: 150 NPAALETPLPKWRAALCRIYSDSILSISGIISGGGAVMVPYVETVARCWKFVGFVGSCGG 209

Query: 181 KVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILPW 240
           K +REVAASP+AVVELPSVA     AAVECVICKEEMGEGRDAC+LPC+HLFHWLCILPW
Sbjct: 210 KGKREVAASPVAVVELPSVA---AAAAVECVICKEEMGEGRDACQLPCEHLFHWLCILPW 269

Query: 241 LRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           LRKRNTCPCCRFQLPTDDV  EIQRLWEIL K+GST+ TSDGD
Sbjct: 270 LRKRNTCPCCRFQLPTDDVFAEIQRLWEILLKLGSTITTSDGD 309

BLAST of CsaV3_3G035280 vs. ExPASy TrEMBL
Match: A0A6J1F6V7 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita moschata OX=3662 GN=LOC111442657 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.3e-128
Identity = 233/284 (82.04%), Postives = 258/284 (90.85%), Query Frame = 0

Query: 1   MEELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSL 60
           MEEL+P +VI AAL+TLS P L+DLSHSIFS++H  RRRLTFILSSPTLFS TLRHLNSL
Sbjct: 1   MEELKPSTVIMAALSTLSSPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSL 60

Query: 61  SLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQH 120
           SLSHKSLL+ARFLLSALRRLSRPFQ+PSK  P+HPSTAA++P+DLDAAVLLLLLC+VRQH
Sbjct: 61  SLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQH 120

Query: 121 NPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGS-CG 180
           NPAAL TPIT+WR+TLC+IYSDSLLT+SG+ATGG GA IPYI+TV RCWKFVGFV S  G
Sbjct: 121 NPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNG 180

Query: 181 GKVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCILP 240
           GK RREVAASP+AVVELPSVAV GG  AVECVICKEEM EGRDAC+LPC+HLFHWLCILP
Sbjct: 181 GKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILP 240

Query: 241 WLRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 284
           WLRKRNTCPCCRFQLPTDD+ GEIQRLW+IL KVGS   +SDGD
Sbjct: 241 WLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGS---SSDGD 280

BLAST of CsaV3_3G035280 vs. TAIR 10
Match: AT5G02750.1 (RING/U-box superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-66
Identity = 147/283 (51.94%), Postives = 177/283 (62.54%), Query Frame = 0

Query: 3   ELEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNSLSL 62
           E E  ++I A+L+ LSP  L +L+HSI S  H HRRRL  +LSSPTLFSLTLRHL SLSL
Sbjct: 2   EDENTTIIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRHLLSLSL 61

Query: 63  SHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISP--QDLDAAVLLLLLCEVRQH 122
             K+ L+A  LLS L         P  +   H S+ A++   +DLDA VLLL LCE  Q 
Sbjct: 62  PDKTHLIANHLLSLLH--------PLLIHRKHHSSYAVTMKLRDLDAVVLLLFLCETHQL 121

Query: 123 NPAALRTPITKWRATLCKIYSDSLLT-VSGLATGGGGALIPYIDTVVRCWKFVGFVGSCG 182
           +P  L      WR  L   YS+++L+  SGL T   G L+PYI+T+VRC +FV  +G   
Sbjct: 122 HPDVLEASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPYIETLVRCKRFVDIMGGYN 181

Query: 183 GKVRR------EVAASPMAVVELPSVAV----GGGGAAVECVICKEEMGEGRDACKLPCD 242
              RR      +V A+  AVV L +V V          VECVICKEEM EGRD C++PC 
Sbjct: 182 HLRRRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEMSEGRDVCEMPCQ 241

Query: 243 HLFHWLCILPWLRKRNTCPCCRFQLPTDDVLGEIQRLWEILFK 273
           H FHW CILPWL K+NTCP CRFQLPTDDV  EIQRLWEIL K
Sbjct: 242 HFFHWKCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

BLAST of CsaV3_3G035280 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-15
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 210 CVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTDD 259
           C +CK+EM  G  A +LPC+H +H  CI+PWL+ RNTCP CR++LPTDD
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDD 357

BLAST of CsaV3_3G035280 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-14
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0

Query: 176 GSCGGKVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWL 235
           G  G +     A S +  +E   V+   G   + C +CK+ M  G    KLPC H +H  
Sbjct: 223 GGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGD 282

Query: 236 CILPWLRKRNTCPCCRFQLPTDDVLGEIQR 266
           CI+PWL  RN+CP CRFQL TDD   E +R
Sbjct: 283 CIVPWLGTRNSCPVCRFQLETDDAEYEEER 312

BLAST of CsaV3_3G035280 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.6e-14
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0

Query: 207 AVECVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKRNTCPCCRFQLPTD 258
           AV C +CKEEM  G++  +LPC H +H  CI+PWL  RNTCP CRF+LP+D
Sbjct: 369 AVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419

BLAST of CsaV3_3G035280 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 7.8e-14
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0

Query: 188 ASPMAVVELPSVAVGGGGAAVE---CVICKEEMGEGRDACKLPCDHLFHWLCILPWLRKR 247
           AS  A+  LP+V V       E   C +C +E  +G D  ++PC H+FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 248 NTCPCCRFQLPTDD 259
           N+CP CRF+LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004137953.11.3e-159100.00E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis sativus] >KGN58913.1 hyp... [more]
XP_016899723.15.0e-15696.82PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis melo][more]
KAA0044054.11.4e-15097.06E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucumis melo var. makuwa] >TYK25... [more]
XP_038905798.13.6e-14690.81E3 ubiquitin-protein ligase SGR9, amyloplastic [Benincasa hispida][more]
XP_022145706.19.5e-13181.27E3 ubiquitin-protein ligase SGR9, amyloplastic [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q8GXF81.5e-6551.94E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 G... [more]
Q9P0P03.4e-1447.89E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1[more]
Q3T0W34.4e-1449.30E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1[more]
Q9SPL23.8e-1341.11E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV... [more]
Q6GPV53.8e-1351.39E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LAQ36.2e-160100.00RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736610 P... [more]
A0A1S4DUS92.4e-15696.82E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5A7TLA86.8e-15197.06E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1CX454.6e-13181.27E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Momordica charantia OX=3673 GN... [more]
A0A6J1F6V71.3e-12882.04E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
AT5G02750.11.0e-6651.94RING/U-box superfamily protein [more]
AT5G08139.13.2e-1559.18RING/U-box superfamily protein [more]
AT5G64920.12.7e-1441.11COP1-interacting protein 8 [more]
AT5G60820.14.6e-1458.82RING/U-box superfamily protein [more]
AT3G19950.17.8e-1445.95RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 210..250
e-value: 3.5E-5
score: 33.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 209..251
e-value: 2.4E-11
score: 43.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 210..251
score: 11.884405
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 203..262
e-value: 1.1E-17
score: 65.0
NoneNo IPR availablePANTHERPTHR15710:SF67E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTICcoord: 3..280
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 3..280
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 209..257

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G035280.1CsaV3_3G035280.1mRNA