CsaV3_3G034220 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G034220
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Reticulon-like protein
Location	chr3: 29119695 .. 29121927 (+)
RNA-Seq Expression	CsaV3_3G034220
Synteny	CsaV3_3G034220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATCTTTAAATGCCCATGTGAAATAATTCATTTGATCAGAGGATTATACAGAGAACATCCTCTTCCTCTCTCTCTCTCTCTGTAACCAGTCAAAAAAAAGAAAAAGGAAATGAATGTCAATACCAATTCCAATGGGGAAATGAAGAAGGAGAGGAATAAAAAGGCACGAGGGACATGGCGCTTTTGACCTGTCAGCTGGCCCATTTCATTTCTTACCATTCCAAATAGTCTGCCTCTCAACACTGAGTGGACAACAAATAAAAGTTAAACACACGAACTTCTGTTTTTCTTTTTCTGTTGGCTGGCTGCTTCAGACCTCTCTGTTTCTGTTTCTTTAGGGTATTTTTGAAATCAAGATCCTCTCTTTTCAATTCTTTTCATGGGTTCCTCCGATCGTTTATTTTGTAAGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGGTATGTTAAGATCTTCTTATTTCTGGGTTTTTTTTTTTCCTTGATGGTGGATCCTTTTAAATTTCTTTTGGATTGCTCTATTTCGATTTTCAATTGACTTTGCTGTTGAATTTCATAGCAGTTATGGGAAATTTTTAATCCATCAACTATTTTCCTCTTTTCTTCATCCCAAATGAAATTCTTGCTGTGGATTCTGCTTTTCTCTGCAGCTGCTAGAGTTCTAGGATCCATTTCTTTTGCTATAAAATCACTAAGGATTGGATTTAACTTTTGAGTTTTTAATCTGTTCAGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTATGGGGATATTGTTAATAACGTTGGCGACTTGGTTGGTGTTTGAGAGATGTGGTTACACACTTTTGTCTTTAATCTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGTAACTAATCGGAGATTGCCTCTTGACTTGCCTGTTATAAACTATCTCTTCAATTTGAATATCAACGAAGAACGGTGAACTGATATATAGGTTTGAGAATGCATGATCTTTAATAGATAAGAGGCATTTCCCTATTGGATTTGTCAATGGTCTTGAATAATGATTAGGTCCTGGTTCAAATTCTCTAATTTTTCAACTACTTAATCTCTTAATTTGTCCTTGCTTTCTTTTACATTTGACGAACATTTTGGGATTTCTACTTCCGTGAGTTTCATTCACTTAGTAATACTACGAGATATGTAAATGCATTCGGTAGTTTTCAAGCATTCTAAAACTTACCAATTTAAAATATAGTATTTAGTTTTTGATCCACTGCTGTCTCCTGGGTTCAGAAGTGAAAATTGTTCTTGAATTTATATCTTTCCAGGCTTCCTTAGTTGCATGCTAATGAAGTGTAGCTTAACTTCTAAGTACTTTGATTAAGATTACTTCTGACTCTGCCACTTTTCTTCCTGAACAGACCAGCGCCGCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCGTGTGAATGCTTTTCTATCTGTTACGCAAGATATAGCCATGGGAAAAGACCCCAGGTTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATATGATCACTTTGGCTTACACCAGTAAGTTTTCAATTTTCAGTGTCCATAATTGGACGATGATCAATGGAATTCATAGACATTTTTTCTCTCTATGACAGGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGCCATATTGATGTACAAAAAATTGTATCAGTTTTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCAGCAATCTTTCTTGCTCATGGCTTCCTCTCTCTCTCGCGCTTTCTTCTTGTTTCATTTTGGATGTGTTTATGGGGTTCTTTCAACCCACTTTGGCTGATGGCTAGCACCTCATGAGTGACAGAAGTGTGAGAGAAATGATTGTATTTTGTTCATAACTTTGTTTTCATTTTCTCTAATTCCTGCTAGAGAAATGTATTTAGAAACGGCATATTAAGAATTTTGAATCTTTTTCCCCATTTGGGTGATTGGGGGTTTACAGGCAAGTTGATATATTTATATACATATGCAGCCTTAACAGCAGCAACTATAATTGATGTTTCCTTACCATCAT

mRNA sequence

ATGGGTTCCTCCGATCGTTTATTTTGTAAGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTATGGGGATATTGTTAATAACGTTGGCGACTTGGTTGGTGTTTGAGAGATGTGGTTACACACTTTTGTCTTTAATCTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCGCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCGTGTGAATGCTTTTCTATCTGTTACGCAAGATATAGCCATGGGAAAAGACCCCAGGTTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATATGATCACTTTGGCTTACACCAGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGCCATATTGATGTACAAAAAATTGTATCAGTTTTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Coding sequence (CDS)

ATGGGTTCCTCCGATCGTTTATTTTGTAAGCAGCGAACCCTTCATGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTATGGGGATATTGTTAATAACGTTGGCGACTTGGTTGGTGTTTGAGAGATGTGGTTACACACTTTTGTCTTTAATCTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGACCAGCGCCGCCTCTTCCTGAGTTGTATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATCCGTTCCCGTGTGAATGCTTTTCTATCTGTTACGCAAGATATAGCCATGGGAAAAGACCCCAGGTTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATATGATCACTTTGGCTTACACCAGCCTTCTACTCGTGCTTACAATCCCCGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGCCATATTGATGTACAAAAAATTGTATCAGTTTTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Protein sequence

MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKKLYQFYVKLDEMRVLTYQQWILEKEKLS*

Homology

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BLAST of CsaV3_3G034220 vs. NCBI nr
Match: XP_004137740.1 (reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Csa_001500 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY
Sbjct: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           KKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

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BLAST of CsaV3_3G034220 vs. NCBI nr
Match: XP_008442476.1 (PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 382.1 bits (980), Expect = 3.1e-102
Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

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BLAST of CsaV3_3G034220 vs. NCBI nr
Match: XP_038904646.1 (reticulon-like protein B12 [Benincasa hispida])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 196/209 (93.78%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT+GILLITLATWLVFERCGYTLLSL+
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLITLATWLVFERCGYTLLSLV 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNEAASFIRSRVN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDPRLFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVDRH ILMY
Sbjct: 121 MGKDPRLFFKVAACLWLISVISGLTDLITLGYTSLLLVLTIPALYEKYEDYVDRHVILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KL+QFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 181 RKLHQFYVKLDEKRVLTYQQWILEKEKLS 209

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BLAST of CsaV3_3G034220 vs. NCBI nr
Match: KAA0044144.1 (reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 377.5 bits (968), Expect = 7.6e-101
Identity = 198/210 (94.29%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILN-RPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDI 120
           SSVLLLLVTIIFLWAKSASILN RPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDI
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YKKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           Y+KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210

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BLAST of CsaV3_3G034220 vs. NCBI nr
Match: XP_016899688.1 (PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 8.4e-100
Identity = 196/209 (93.78%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGI  DVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGI--DVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 207

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BLAST of CsaV3_3G034220 vs. ExPASy Swiss-Prot
Match: Q9M392 (Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.0e-52
Identity = 103/189 (54.50%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 3   SSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISS 62
           SSD+LF + RT+HEI+GGGIVADV+LWR+KN+++GI+ +T+A+W+VFE   YT+ +LISS
Sbjct: 4   SSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISS 63

Query: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMG 122
           VLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  EA+ ++R  VN  L V+ DIAM 
Sbjct: 64  VLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMA 123

Query: 123 KDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKK 182
           +D  L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+      +  K
Sbjct: 124 RDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNK 183

Query: 183 LYQFYVKLD 192
             + Y++L+
Sbjct: 184 TRELYLRLE 192

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 89/206 (43.20%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 3   SSD-RLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLIS 62
           SSD RL  +Q T+H+ +GGG  AD++LWRR++L++G+++I+   WL+FE  G   LS+ S
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSS 79

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAM 122
            VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN AA+  R ++N  L +  D+ +
Sbjct: 80  DVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTV 139

Query: 123 GKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYK 182
           G D RLFFKV  CLWL+S I     + TL Y   +L +TIPALY KY+  VD+    +++
Sbjct: 140 GNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHR 199

Query: 183 KLYQFYVKLDEMRVLTYQQWILEKEK 208
           +L   Y  +DE  V++   W L K+K
Sbjct: 200 RLSHHYKIVDE-NVISRLSWSLSKDK 224

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.7e-34
Identity = 71/161 (44.10%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 13  TLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIF 72
           ++H+ +G G VAD++LWR +   + +L+ +   W +FER GY LLS +S+VLLLLV I F
Sbjct: 12  SVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFF 71

Query: 73  LWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMGKDPRLFFKVA 132
           LWAKSA++LNRP PP+P + + E+  N+AA  +R  +N  LS+  DI + ++P    +V+
Sbjct: 72  LWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVS 131

Query: 133 ACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVD 174
             LW IS +  L + +TL Y  +LL L+ P +YEKY+D++D
Sbjct: 132 LVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30
Identity = 67/187 (35.83%), Postives = 118/187 (63.10%), Query Frame = 0


Query: 6   RLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLL 65
           RLF +++ +H+++GGG  AD+ LWR K ++ G+L    A+W++FE   Y LL+ +    +
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 66  LLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMGKDP 125
             +  +FLW+ + + +++  P +PE+++ ED + +  S +R  +N  L++ ++IA GKD 
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 126 RLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKKLYQ 185
           + F  V A LW++S+I    + +TL YT+ +L+ TIP LYEKYED VD +     +++ +
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 186 FYVKLDE 193
            Y  LDE
Sbjct: 231 QYAVLDE 237

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.6e-30
Identity = 66/187 (35.29%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 6   RLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLL 65
           RLF +++ +H+++GGG  AD+ +W+ K ++ G+L    A W+VFE   Y LL+L+  V++
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 66  LLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMGKDP 125
           +++ ++FLW+ +   +N+  P +PE+++ E+ + + AS +R  +N   S  ++IA G+D 
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 126 RLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKKLYQ 185
           + F    A LW++S++ G  + +TLAY +L+L+ T+P  Y+KYED VD        +L +
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 186 FYVKLDE 193
            Y  LDE
Sbjct: 252 QYAVLDE 258

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy TrEMBL
Match: A0A0A0LFE7 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.0e-108
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY
Sbjct: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           KKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy TrEMBL
Match: A0A5D3DMY4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001110 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102
Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy TrEMBL
Match: A0A1S3B6E8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102
Identity = 198/209 (94.74%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy TrEMBL
Match: A0A5A7TLS2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004970 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.7e-101
Identity = 198/210 (94.29%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILN-RPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDI 120
           SSVLLLLVTIIFLWAKSASILN RPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDI
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YKKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           Y+KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210

[Close]

BLAST of CsaV3_3G034220 vs. ExPASy TrEMBL
Match: A0A1S4DUP5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.1e-100
Identity = 196/209 (93.78%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGI  DVILWRRKNLT GILLITLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGI--DVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRS VN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 207

[Close]

BLAST of CsaV3_3G034220 vs. TAIR 10
Match: AT3G54120.1 (Reticulon family protein )

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-53
Identity = 103/189 (54.50%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 3   SSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISS 62
           SSD+LF + RT+HEI+GGGIVADV+LWR+KN+++GI+ +T+A+W+VFE   YT+ +LISS
Sbjct: 4   SSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISS 63

Query: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMG 122
           VLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  EA+ ++R  VN  L V+ DIAM 
Sbjct: 64  VLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMA 123

Query: 123 KDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKK 182
           +D  L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+      +  K
Sbjct: 124 RDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNK 183

Query: 183 LYQFYVKLD 192
             + Y++L+
Sbjct: 184 TRELYLRLE 192

[Close]

BLAST of CsaV3_3G034220 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 161.4 bits (407), Expect = 8.0e-40
Identity = 89/206 (43.20%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 3   SSD-RLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLIS 62
           SSD RL  +Q T+H+ +GGG  AD++LWRR++L++G+++I+   WL+FE  G   LS+ S
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSS 79

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAM 122
            VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN AA+  R ++N  L +  D+ +
Sbjct: 80  DVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTV 139

Query: 123 GKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYK 182
           G D RLFFKV  CLWL+S I     + TL Y   +L +TIPALY KY+  VD+    +++
Sbjct: 140 GNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHR 199

Query: 183 KLYQFYVKLDEMRVLTYQQWILEKEK 208
           +L   Y  +DE  V++   W L K+K
Sbjct: 200 RLSHHYKIVDE-NVISRLSWSLSKDK 224

[Close]

BLAST of CsaV3_3G034220 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 89/207 (43.00%), Postives = 133/207 (64.25%), Query Frame = 0


Query: 3   SSD-RLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLIS 62
           SSD RL  +Q T+H+ +GGG  AD++LWRR++L++G+++I+   WL+FE  G   LS+ S
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSS 79

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAM 122
            VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN AA+  R ++N  L +  D+ +
Sbjct: 80  DVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTV 139

Query: 123 GKDPRLFFK-VAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 182
           G D RLFFK V  CLWL+S I     + TL Y   +L +TIPALY KY+  VD+    ++
Sbjct: 140 GNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIH 199

Query: 183 KKLYQFYVKLDEMRVLTYQQWILEKEK 208
           ++L   Y  +DE  V++   W L K+K
Sbjct: 200 RRLSHHYKIVDE-NVISRLSWSLSKDK 225

[Close]

BLAST of CsaV3_3G034220 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 90/229 (39.30%), Postives = 134/229 (58.52%), Query Frame = 0


Query: 3   SSD-RLFCKQRTLHEIVGGG----------------------IVADVILWRRKNLTMGIL 62
           SSD RL  +Q T+H+ +GGG                      I AD++LWRR++L++G++
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRRRHLSLGVI 79

Query: 63  LITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVN 122
           +I+   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN
Sbjct: 80  IISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVN 139

Query: 123 EAASFIRSRVNAFLSVTQDIAMGKDPRLFFK-VAACLWLISVISGLTDMITLAYTSLLLV 182
            AA+  R ++N  L +  D+ +G D RLFFK V  CLWL+S I     + TL Y   +L 
Sbjct: 140 SAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILS 199

Query: 183 LTIPALYEKYEDYVDRHAILMYKKLYQFYVKLDEMRVLTYQQWILEKEK 208
           +TIPALY KY+  VD+    ++++L   Y  +DE  V++   W L K+K
Sbjct: 200 VTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSWSLSKDK 247

[Close]

BLAST of CsaV3_3G034220 vs. TAIR 10
Match: AT3G19460.1 (Reticulon family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-35
Identity = 71/161 (44.10%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 13  TLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIF 72
           ++H+ +G G VAD++LWR +   + +L+ +   W +FER GY LLS +S+VLLLLV I F
Sbjct: 12  SVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFF 71

Query: 73  LWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMGKDPRLFFKVA 132
           LWAKSA++LNRP PP+P + + E+  N+AA  +R  +N  LS+  DI + ++P    +V+
Sbjct: 72  LWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVS 131

Query: 133 ACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVD 174
             LW IS +  L + +TL Y  +LL L+ P +YEKY+D++D
Sbjct: 132 LVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172

The following BLAST results are available for this feature:

BLAST of CsaV3_3G034220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137740.1	1.9e-107	100.00	reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Cs...	[more]
XP_008442476.1	3.1e-102	94.74	PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reti...	[more]
XP_038904646.1	2.0e-101	93.78	reticulon-like protein B12 [Benincasa hispida]	[more]
KAA0044144.1	7.6e-101	94.29	reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016899688.1	8.4e-100	93.78	PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo]	[more]

BLAST of CsaV3_3G034220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M392	3.0e-52	54.50	Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1	[more]
Q8GYH6	1.1e-38	43.20	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9LT71	3.7e-34	44.10	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
Q9FFS0	1.5e-30	35.83	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]
Q9SUR3	5.6e-30	35.29	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]

BLAST of CsaV3_3G034220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFE7	9.0e-108	100.00	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1	[more]
A0A5D3DMY4	1.5e-102	94.74	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3B6E8	1.5e-102	94.74	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]
A0A5A7TLS2	3.7e-101	94.29	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S4DUP5	4.1e-100	93.78	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]

BLAST of CsaV3_3G034220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54120.1	2.2e-53	54.50	Reticulon family protein	[more]
AT3G10915.2	8.0e-40	43.20	Reticulon family protein	[more]
AT3G10915.4	2.0e-38	43.00	Reticulon family protein	[more]
AT3G10915.5	2.0e-35	39.30	Reticulon family protein	[more]
AT3G19460.1	2.7e-35	44.10	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 23..176 e-value: 3.6E-49 score: 166.7
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 23..192 score: 30.725901
None	No IPR available	PANTHER	PTHR10994:SF65	RETICULON-LIKE PROTEIN B12	coord: 6..207
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 6..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G034220.1	CsaV3_3G034220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium