CsaV3_3G033870 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G033870
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Mitochondrial inner membrane protease subunit 2
Location	chr3: 28951453 .. 28953498 (+)
RNA-Seq Expression	CsaV3_3G033870
Synteny	CsaV3_3G033870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACCGAAATTTAGTGTGGAACGTTGTGAAGAAATCTTTCACATTTGGAATTATAGGGGTTACGATTTCGGATCGTTATGCGAGTGTTGTTCCTATCCGTGGTGCTTCAATGTCTCCCACTTTTAATCCTATTGCGACTTCTCTGACAGGACCAATGACTGGTAATTTTCTAAACCTAGCATATTTATTATGGCGAGATGGTACGGTCTGATGCTCCGGAAATTTTGGTTTCAGGTGACTACGTGCTGGTTGAGAAATTTTGCCTTGAGAAATATAAATTTTCTCCCGGTGACGTTATTGTTTACCGGTAAGTTTTTTTCTATCGATGCTGATAGTCATCTGTATTGATTTGTTGTGGAGGTTTTTTTTTTCTGTAATGCGGTAATGGCTTGATTTAATTTCTCTTTTATGGGATGATGTAGTGCATTGTATATGGATAGTCTTGCTCGATTGGTCAAGGCTTGGAATCTTAAAACGTGCAGGCTAGATAATTCAAGATTTTGATCAGCTCTTCTTGATTTACTTTTCATCTGCAAGGCCATAAGATAATCATTGCCTACGATGTGAAGAAATCTCGAAATCTCGTTTGGACTCCAATTTTTAACTTATCAAAACCACTCATACAATGAATATAGATAAATAAAGAACTGAAAATCATGGTTAGATTAATTCCATGACGTGCAATATGTATAGATCAATTGTTTACTCTTAGGCATTCCCATTTTCATTATAAGGGTTGGATTTCGAGTATGGAGGTGCAGACATAGCAAGTTTCCTGAGTTTAAATAAAAGCTGGGGTCTTCTTGGTGACTTTTATCTAAAGTTTGGACGATGTTCCATTTCATGGAGGGTGGCTTAAAACTTGGAGCGTCCTCTTATGTTTCCTTGGTTTCCTTTTGTTCTTTGAATGTCATCCATGAAAGCTCTGTTTCTCATTTTTCTGAAAATTTATTTTAATTGATCCATCTCAAATCATACGTAAATTGCTTATATTTTTTTGAATTTGAAGCAAGGTTGAGGTAAAAAAATATTTTCGTTTCATGTAGGTCATGTGTTTAACTGGAGAAAGGCAGAACCTCATTTTGCATCCTCTTTTCTTATATGAAATATGGAAAATGTTTTTGTTCCACTCTTAGTGAACATGCTGTGATCGCACTTCCCAATTTATCACAAATTTACATTCAGAGACTTGCACAATTTGTATAAAATTTCCCTCCCAAAATTGTTGACCTATTGCAGCTCCCCTTGTAATTACAAGGAGAAACAAGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTTAAGGTTCCAGAAGGACACTGTTGGGTTGAAGGCGATAATCCAGAATGCAGCATGGATTCGAGATCTTTTGGCCCAGTAAGATACCATCTTCTCTAGTTAACAGTCTATTTCTTTTGGGTGTGATTTTAGTTTCGAGATGCAACCATAGTTTCTGTGGATGGGCAGCCTTAGTGGGTAATTATTCTTGCAACTATTTATGGAGATTTGAAAAACACAGTTGAAAATACCATCATGTTTTTTTTTAGTTTAAAACAAAGTTTTCATTGAGGGCTTATCTTGGTAGTCTTTCTCTTCAATATTTTGTTGGATCCCTCTTATGTTTTTGAGTCGGTGTTTGATGTCTTAAGGAGGATTAAGATACCGAAGTTACGTTTTTTTTTCTTGGTTAAGTTTTTTCTAATAGCTTAGGTTTGATTTTCAAATGAAGTATCATATAACGAACATACATGTATTAATTTACTTGTGCCCTTTGAAATACTTAACTGCAAGTATCTGATTTATGTGAGTGCAATTCTTGTTTTATGCTCTTTACACAACTATGCCCAACTAAATTGGTGGCAGATTCCAATGGGTTTGATTCAAGGAAGGGTGTCACACATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAAGGAGAATCAAATCCTACCAATTCAACTAAAACTCAAGGTAGAGAGAGAAGTAGTTTTTCATGA

mRNA sequence

ATGGCAAACCGAAATTTAGTGTGGAACGTTGTGAAGAAATCTTTCACATTTGGAATTATAGGGGTTACGATTTCGGATCGTTATGCGAGTGTTGTTCCTATCCGTGGTGCTTCAATGTCTCCCACTTTTAATCCTATTGCGACTTCTCTGACAGGACCAATGACTGGTGACTACGTGCTGGTTGAGAAATTTTGCCTTGAGAAATATAAATTTTCTCCCGGTGACGTTATTGTTTACCGCTCCCCTTGTAATTACAAGGAGAAACAAGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTTAAGGTTCCAGAAGGACACTGTTGGGTTGAAGGCGATAATCCAGAATGCAGCATGGATTCGAGATCTTTTGGCCCAATTCCAATGGGTTTGATTCAAGGAAGGGTGTCACACATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAAGGAGAATCAAATCCTACCAATTCAACTAAAACTCAAGGTAGAGAGAGAAGTAGTTTTTCATGA

Coding sequence (CDS)

ATGGCAAACCGAAATTTAGTGTGGAACGTTGTGAAGAAATCTTTCACATTTGGAATTATAGGGGTTACGATTTCGGATCGTTATGCGAGTGTTGTTCCTATCCGTGGTGCTTCAATGTCTCCCACTTTTAATCCTATTGCGACTTCTCTGACAGGACCAATGACTGGTGACTACGTGCTGGTTGAGAAATTTTGCCTTGAGAAATATAAATTTTCTCCCGGTGACGTTATTGTTTACCGCTCCCCTTGTAATTACAAGGAGAAACAAGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTTAAGGTTCCAGAAGGACACTGTTGGGTTGAAGGCGATAATCCAGAATGCAGCATGGATTCGAGATCTTTTGGCCCAATTCCAATGGGTTTGATTCAAGGAAGGGTGTCACACATCGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAAAAAATATCCTCAAGGAGAATCAAATCCTACCAATTCAACTAAAACTCAAGGTAGAGAGAGAAGTAGTTTTTCATGA

Protein sequence

MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRERSSFS*

Homology

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BLAST of CsaV3_3G033870 vs. NCBI nr
Match: XP_004137724.1 (mitochondrial inner membrane protease subunit 2 [Cucumis sativus] >XP_011651864.1 mitochondrial inner membrane protease subunit 2 [Cucumis sativus] >XP_031738615.1 mitochondrial inner membrane protease subunit 2 [Cucumis sativus] >KGN58766.1 hypothetical protein Csa_002002 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 6.5e-104
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180
           GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180

Query: 181 SSFS 185
           SSFS
Sbjct: 181 SSFS 184

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BLAST of CsaV3_3G033870 vs. NCBI nr
Match: XP_008442429.1 (PREDICTED: mitochondrial inner membrane protease subunit 2 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 1.4e-103
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180
           GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180

Query: 181 SSFS 185
           +SFS
Sbjct: 181 TSFS 184

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BLAST of CsaV3_3G033870 vs. NCBI nr
Match: XP_038887833.1 (LOW QUALITY PROTEIN: mitochondrial inner membrane protease subunit 2-like [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 3.1e-90
Identity = 159/172 (92.44%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANRNLVWN  KK FTFGIIGVT+SDRYASVVPIRG SMSPTFNP ATSL G ++GDYVL
Sbjct: 53  MANRNLVWNAAKKCFTFGIIGVTVSDRYASVVPIRGVSMSPTFNPRATSLAGTVSGDYVL 112

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 113 VEKFCLEKYKFSPGDVIVYRSPCNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 172

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNS 173
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIG VEKKYPQGESNPTNS
Sbjct: 173 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGVVEKKYPQGESNPTNS 224

[Close]

BLAST of CsaV3_3G033870 vs. NCBI nr
Match: XP_022145503.1 (mitochondrial inner membrane protease subunit 2 [Momordica charantia])

HSP 1 Score: 318.9 bits (816), Expect = 2.8e-83
Identity = 148/165 (89.70%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANR+LVW V KK FTFGIIGVT+SDRYAS+VP+RGASMSPTFNP ATS  G +TGDYVL
Sbjct: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVY SP NYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQG
Sbjct: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQG 165

[Close]

BLAST of CsaV3_3G033870 vs. NCBI nr
Match: KAG7027898.1 (Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 147/165 (89.09%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANR+LVWNV KK FT GIIGVTISDRYASVVPIRGASMSPTFNP ATSL GP++ DYVL
Sbjct: 454 MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 513

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVYRSP NYKEK VKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 514 VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 573

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN +CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+ YPQG
Sbjct: 574 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQG 618

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BLAST of CsaV3_3G033870 vs. ExPASy Swiss-Prot
Match: Q6AZD4 (Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 20  IGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT+ DR A V  + GASM P+ NP      G  + D VL+ ++ +  Y    GD++  
Sbjct: 24  VTVTVLDRLAYVARVEGASMQPSLNP-----DGESSPDVVLLNRWSVRNYHVQRGDIVSV 83

Query: 80  RSPCNYKEKQVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPI 139
            SP N ++K +KR+I + GD++   G +  Y  V+VP+GH W+EGD+   S DS +FGP+
Sbjct: 84  LSPKNPQQKIIKRVIGIEGDFIKTLGYKNRY--VRVPDGHLWIEGDHHGHSFDSNAFGPV 143

Query: 140 PMGLIQGRVSHIVWPPQRIGAVEKKYP 164
            +GL+ GR SHI+WPP R   +E   P
Sbjct: 144 SLGLVHGRASHIIWPPSRWQRIEPSVP 163

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy Swiss-Prot
Match: Q2KI92 (Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 61/147 (41.50%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 20  IGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A V  + GASM P+ NP      G  + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGASMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVQRGDIVSL 84

Query: 80  RSPCNYKEKQVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD V   G +  Y  VKVP GH WVEGD+   S DS SFGP+
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVKTMGHKNRY--VKVPRGHIWVEGDHHGHSFDSNSFGPV 144

Query: 140 PMGLIQGRVSHIVWPPQRIGAVEKKYP 164
            +GL+    +HI+WPP+R   +E   P
Sbjct: 145 SLGLLHAHATHILWPPKRWQKLESVLP 164

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy Swiss-Prot
Match: Q96T52 (Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2L PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 20  IGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A V  + GASM P+ NP      G  + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGASMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVHRGDIVSL 84

Query: 80  RSPCNYKEKQVKRIIALPGD---WVGTRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD    +G +  Y  VKVP GH WVEGD+   S DS SFGP+
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVRTIGHKNRY--VKVPRGHIWVEGDHHGHSFDSNSFGPV 144

Query: 140 PMGLIQGRVSHIVWPPQRIGAVEKKYP 164
            +GL+    +HI+WPP+R   +E   P
Sbjct: 145 SLGLLHAHATHILWPPERWQKLESVLP 164

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy Swiss-Prot
Match: Q8BPT6 (Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp2l PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 20  IGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A V  + G+SM P+ NP      G  + D VL+  + +  ++   GD++  
Sbjct: 25  VAVTFLDRVACVARVEGSSMQPSLNP-----GGSQSSDVVLLNHWKVRNFEVQRGDIVSL 84

Query: 80  RSPCNYKEKQVKRIIALPGDWVGT-RQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPIPM 139
            SP N ++K +KR+IAL GD V T      +VKVP GH WVEGD+   S DS SFGP+ +
Sbjct: 85  VSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHHGHSFDSNSFGPVSL 144

Query: 140 GLIQGRVSHIVWPPQRIGAVEKKYP 164
           GL+    +HI+WPP+R   +E   P
Sbjct: 145 GLLHAHATHILWPPERWQRLESVLP 164

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy Swiss-Prot
Match: Q5PQ63 (Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=immp2l PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0


Query: 20  IGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVY 79
           + VT  DR A +  + G SM P+ NP A         D VL+ ++    Y    GD++  
Sbjct: 22  VTVTFLDRVACIARVEGVSMQPSLNPDARG-----ESDIVLLNRWRARNYDVQRGDIVSL 81

Query: 80  RSPCNYKEKQVKRIIALPGDWV---GTRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPI 139
            SP N ++K +KR+IAL GD V   G +  Y  VKVP GH WVEGD+   S DS +FGP+
Sbjct: 82  VSPKNPEQKIIKRVIALEGDIVKTLGHKNRY--VKVPRGHVWVEGDHHGHSFDSNAFGPV 141

Query: 140 PMGLIQGRVSHIVWPPQR 155
            +GL+    +HI+WPP R
Sbjct: 142 SLGLLHSHATHILWPPNR 152

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy TrEMBL
Match: A0A0A0LFB4 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G731770 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.1e-104
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180
           GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180

Query: 181 SSFS 185
           SSFS
Sbjct: 181 SSFS 184

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy TrEMBL
Match: A0A1S3B5N7 (Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486302 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.0e-104
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180
           GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER
Sbjct: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNPTNSTKTQGRER 180

Query: 181 SSFS 185
           +SFS
Sbjct: 181 TSFS 184

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy TrEMBL
Match: A0A6J1CW41 (Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 GN=LOC111014939 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 148/165 (89.70%), Postives = 154/165 (93.33%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANR+LVW V KK FTFGIIGVT+SDRYAS+VP+RGASMSPTFNP ATS  G +TGDYVL
Sbjct: 1   MANRSLVWGVAKKCFTFGIIGVTVSDRYASIVPLRGASMSPTFNPRATSQAGAVTGDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEKYKFSPGDVIVY SP NYKEK VKRIIALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKYKFSPGDVIVYCSPSNYKEKHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN ECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQG
Sbjct: 121 GDNAECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQG 165

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy TrEMBL
Match: A0A6J1I8V8 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111470229 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 145/165 (87.88%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANR+LVWNV +K FT GIIGVT+SDRYASVVPIRGASMSPTFNP ATS  GP++ DYVL
Sbjct: 1   MANRSLVWNVARKCFTLGIIGVTVSDRYASVVPIRGASMSPTFNPRATSPAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCLEK++FSPGDVIVYRSP NYKEK VKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN +CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+KYPQG
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERKYPQG 165

[Close]

BLAST of CsaV3_3G033870 vs. ExPASy TrEMBL
Match: A0A6J1GA60 (Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452339 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 146/165 (88.48%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           MANR+LVWNV KK FT GIIGVTISDRYASVVPIRGASMSPTFNP ATSL GP++ DYVL
Sbjct: 1   MANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           VEKFCL+K++FSPGDVIVYRSP NYKEK VKR+IALPGDWVGTRQTYDVVKVPEGHCWVE
Sbjct: 61  VEKFCLDKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQG 166
           GDN +CSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVE+ YPQG
Sbjct: 121 GDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQG 165

[Close]

BLAST of CsaV3_3G033870 vs. TAIR 10
Match: AT3G08980.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 208.0 bits (528), Expect = 6.5e-54
Identity = 93/158 (58.86%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60
           M  +N++W V KKSFT  IIG+TISDR  SVVP+RG SMSPTFNP   S       DYVL
Sbjct: 1   MGIQNILWQVAKKSFTGSIIGLTISDRCCSVVPVRGDSMSPTFNPQRNS----YLDDYVL 60

Query: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVPEGHCWVE 120
           V+KFCL+ YKF+ GDV+V+ SP ++ ++ +KRI+ +PG+W+ + +  DV++VPEGHCWVE
Sbjct: 61  VDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGEWISSSR--DVIRVPEGHCWVE 120

Query: 121 GDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAV 159
           GDN   S+DSRSFGPIP+GLIQGRV+ ++WPPQRI  +
Sbjct: 121 GDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRISKI 152

[Close]

BLAST of CsaV3_3G033870 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21
Identity = 56/146 (38.36%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 24  ISDRY-ASVVPIRGASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVYRSP 83
           ++DRY  S   + G SM PT N         +TGD +L E       K   GDV++ RSP
Sbjct: 35  VTDRYIISTTHVHGPSMLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSP 94

Query: 84  CNYKEKQVKRIIALPGDWVGTRQTYDV----------VKVPEGHCWVEGDNPECSMDSRS 143
            + K    KRI+ L GD    R T+            V VP+GH W++GDN   S DSR 
Sbjct: 95  RDPKRMVTKRILGLEGD----RLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRH 154

Query: 144 FGPIPMGLIQGRVSHIVWPPQRIGAV 159
           FGP+P  LI+G+    VWPP+  G++
Sbjct: 155 FGPVPYSLIEGKALLRVWPPEYFGSL 167

[Close]

BLAST of CsaV3_3G033870 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 36  GASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIA 95
           G SM+PT +P         +G+ +L E+      K S GD++V RSP N  +  +KR+I 
Sbjct: 45  GPSMTPTLHP---------SGNVLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVIG 104

Query: 96  LPGDWVG----TRQTYD--VVKVPEGHCWVEGDNPECSMDSRSFGPIPMGLIQGRVSHIV 155
           + GD +     +R++ +   + VP+GH +V+GD    S DSR+FG +P GLIQGRV   V
Sbjct: 105 IEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLIQGRVLWRV 162

Query: 156 WPPQRIG 157
           WP Q  G
Sbjct: 165 WPFQDFG 162

[Close]

BLAST of CsaV3_3G033870 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18
Identity = 50/130 (38.46%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 39  MSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPG 98
           M PT N         +TGD +L E       K   GDV++ RSP + K    KRI+ L G
Sbjct: 1   MLPTLN---------LTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEG 60

Query: 99  DWVGTRQTYDV----------VKVPEGHCWVEGDNPECSMDSRSFGPIPMGLIQGRVSHI 158
           D    R T+            V VP+GH W++GDN   S DSR FGP+P  LI+G+    
Sbjct: 61  D----RLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLR 117

[Close]

BLAST of CsaV3_3G033870 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-16
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 36  GASMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIA 95
           G SM PT +P         +G+ +L E+      K S GD++V RSP N  +  +KR++ 
Sbjct: 45  GPSMIPTLHP---------SGNMLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVVG 104

Query: 96  LPGDWVG------TRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGPIPMGLIQGRV 146
           + GD +              + VP+GH +V+GD    S DSR+FGP+P GLIQGRV
Sbjct: 105 VEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLIQGRV 151

The following BLAST results are available for this feature:

BLAST of CsaV3_3G033870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137724.1	6.5e-104	100.00	mitochondrial inner membrane protease subunit 2 [Cucumis sativus] >XP_011651864....	[more]
XP_008442429.1	1.4e-103	99.46	PREDICTED: mitochondrial inner membrane protease subunit 2 [Cucumis melo]	[more]
XP_038887833.1	3.1e-90	92.44	LOW QUALITY PROTEIN: mitochondrial inner membrane protease subunit 2-like [Benin...	[more]
XP_022145503.1	2.8e-83	89.70	mitochondrial inner membrane protease subunit 2 [Momordica charantia]	[more]
KAG7027898.1	1.1e-82	89.09	Vacuolar cation/proton exchanger 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsaV3_3G033870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AZD4	1.3e-27	40.14	Mitochondrial inner membrane protease subunit 2 OS=Danio rerio OX=7955 GN=immp2l...	[more]
Q2KI92	1.3e-25	41.50	Mitochondrial inner membrane protease subunit 2 OS=Bos taurus OX=9913 GN=IMMP2L ...	[more]
Q96T52	1.3e-25	40.82	Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens OX=9606 GN=IMMP2...	[more]
Q8BPT6	1.6e-25	40.69	Mitochondrial inner membrane protease subunit 2 OS=Mus musculus OX=10090 GN=Immp...	[more]
Q5PQ63	1.2e-23	41.30	Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis OX=8355 GN=imm...	[more]

BLAST of CsaV3_3G033870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFB4	3.1e-104	100.00	Mitochondrial inner membrane protease subunit 2 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A1S3B5N7	7.0e-104	99.46	Mitochondrial inner membrane protease subunit 2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CW41	1.4e-83	89.70	Mitochondrial inner membrane protease subunit 2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I8V8	1.2e-82	87.88	Mitochondrial inner membrane protease subunit 2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GA60	1.2e-82	88.48	Mitochondrial inner membrane protease subunit 2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_3G033870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08980.1	6.5e-54	58.86	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.1	5.6e-21	38.36	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	1.5e-18	39.37	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.2	2.6e-18	38.46	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G23465.1	2.4e-16	37.93	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 89..101 score: 54.95 coord: 27..43 score: 29.83 coord: 112..131 score: 52.86
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 26..162 e-value: 9.5E-30 score: 105.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..184
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 110..150 e-value: 3.3E-8 score: 33.7 coord: 9..105 e-value: 7.6E-13 score: 48.8
IPR019533	Peptidase S26	CDD	cd06530	S26_SPase_I	coord: 30..145 e-value: 6.98726E-24 score: 88.0263
IPR037730	Mitochondrial inner membrane protease subunit 2	PANTHER	PTHR46041	MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2	coord: 2..166
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 30..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G033870.1	CsaV3_3G033870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006627	protein processing involved in protein targeting to mitochondrion
biological_process	GO:0006508	proteolysis
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016020	membrane
cellular_component	GO:0042720	mitochondrial inner membrane peptidase complex
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity