CsaV3_3G033530 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G033530
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 28777967 .. 28779249 (-)
RNA-Seq ExpressionCsaV3_3G033530
SyntenyCsaV3_3G033530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTATATGCACTTGCGGATGTAAGACCAGGTATCGGTTTACATTAGCTAGGTTATGTTGATAATTTAAATATATTTTTTTCTGAAACGAATTGATATTTACATTTCAATGTATCTACGATCATGTTTTGAACTATGTCGTGTTTGAATATAGGTAATTTCTTGGGATATGACAGACTTTCACTCTACGAAGCTGACGTACGCTGATTGGTCGAAGACTGTCTTTGAGTAATTTCAGATTGTCATGTTTTGAAGATACGTTAATTTCACGCGAGGTTTGGACTGTTGGTATTCTTTTCATTTCATTTTAATTTTATTTTTCGTTTTGGTTTACAATTTACATTGTGGTTGATGTAGCTTCAGACGTTCTTTTTGTCAAATTTTGGGGAGTTCGGGAAGATCCTTGTGCATTTGACATAATTGTACTTTGTAACTGTCTAAACTATGTAGATTCATTTGTTAATTTTCTCAAATTGTGGGGAGTTCGGGAAGATCTTTGTCATTTTGAGATAATTTTACTTTGTAATCGATGTATTTTCAGTTCTTTTATGTGTTGCTGTGCGTTTAATATCCACAAGTATGTGTTTGATTTTTACCTTCTTCCTCATTGACTCTATTTTATACAATTTTTTATGAGCTACTTATACACAATTCAGAATATAAAAGGTCAATTTCTTATTGTCTTTTTTATTTTCTAGTTATTATACTCCTAATGTTGCTTCTTTTTCACTTAAGTATATGTCTTTTCTAAAATGATTTTTTGTTTTCGTTCAGTTTTTTAGAATTAATTGTAAAATAAATTATGTGGACTAAATATAGTTTGCCATTTGAGAACCTAATATTGTTATTATAGTTAAAAACGCAAAAAACTAGGGGATAGTTAACGCAGACTATGGATGCAATTCCTATTGAATGAATTTGTACTTGTGCTAGCTGACATCTACTTCTTTAGTGACAATGATTGGTTTATAATTTTGACGAGGTTTACTTTCCTTCTCCGTAGCCAACAATTAGTCCAAAAAGGAGAGCTCCAAAGTCCTGAAAAAATGTTGTTGGATTTCCTGCTTTGCAGATTGCTGTTGCAGTTTACCAGAAATTTGAGTGTCACCAAGGAAGGGAATGTCTTGCCAAAGAGCTAGTTGGATATATATATATTTTGCCAATACTTTGTTCTTCTTACGGTTCCTCCTATCCTCTTCATTTTATGATCATTTGGGGATGGAACTCTTTTATTATTATTAGCATTACTATTGTATTATTCTTTCCATTCTTTGTCTTCTGA

mRNA sequence

ATGCTTATATGCACTTGCGGATGTAAGACCAGATTGTCATGTTTTGAAGATACGTTAATTTCACGCGAGATTGCTGTTGCAGTTTACCAGAAATTTGAGTGTCACCAAGGAAGGGAATGTCTTGCCAAAGAGCTAGTTGGATATATATATATTTTGCCAATACTTTGTTCTTCTTACGGTTCCTCCTATCCTCTTCATTTTATGATCATTTGGGGATGGAACTCTTTTATTATTATTAGCATTACTATTGTATTATTCTTTCCATTCTTTGTCTTCTGA

Coding sequence (CDS)

ATGCTTATATGCACTTGCGGATGTAAGACCAGATTGTCATGTTTTGAAGATACGTTAATTTCACGCGAGATTGCTGTTGCAGTTTACCAGAAATTTGAGTGTCACCAAGGAAGGGAATGTCTTGCCAAAGAGCTAGTTGGATATATATATATTTTGCCAATACTTTGTTCTTCTTACGGTTCCTCCTATCCTCTTCATTTTATGATCATTTGGGGATGGAACTCTTTTATTATTATTAGCATTACTATTGTATTATTCTTTCCATTCTTTGTCTTCTGA

Protein sequence

MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYGSSYPLHFMIIWGWNSFIIISITIVLFFPFFVF*
Homology
[Close]
BLAST of CsaV3_3G033530 vs. NCBI nr
Match: KGN58734.1 (hypothetical protein Csa_002238 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 9.9e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYG 60
          MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYG
Sbjct: 1  MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYG 60

Query: 61 SSYPLHFMIIWGWNSFIIISITIVLFFPFFVF 93
          SSYPLHFMIIWGWNSFIIISITIVLFFPFFVF
Sbjct: 61 SSYPLHFMIIWGWNSFIIISITIVLFFPFFVF 92

[Close]
BLAST of CsaV3_3G033530 vs. ExPASy TrEMBL
Match: A0A0A0LCQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730965 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYG 60
          MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYG
Sbjct: 1  MLICTCGCKTRLSCFEDTLISREIAVAVYQKFECHQGRECLAKELVGYIYILPILCSSYG 60

Query: 61 SSYPLHFMIIWGWNSFIIISITIVLFFPFFVF 93
          SSYPLHFMIIWGWNSFIIISITIVLFFPFFVF
Sbjct: 61 SSYPLHFMIIWGWNSFIIISITIVLFFPFFVF 92

The following BLAST results are available for this feature:
BLAST of CsaV3_3G033530 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58734.19.9e-45100.00hypothetical protein Csa_002238 [Cucumis sativus][more]
BLAST of CsaV3_3G033530 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G033530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCQ64.8e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730965 PE=4 SV=1[more]
BLAST of CsaV3_3G033530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G033530.1CsaV3_3G033530.1mRNA