Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAACTAGAAAATACATGTATTATTACTAATTTGAATGATCAGAAAGTAACTATCAAAAGGTTCATTTTCATTTGTTTAGGCCCAAAGTTGTAGGCCCAATAATAAGCGGGTCAATAGCAATAAGCCCAGTTATGTGGCCCAATTCGAGTGTGTCTATCCGCAACCACTCGCCTCCTTCATTCTCACGTTCTGTTCCCCGACTCCTCCGCCAGTCCTCCATTTTCAGGCAGGTAGAGCTGCTTCTGCTTAGGTCCAAAACCCTACTTGAATCATCTGAAATCTCAGTATTTTATTATCTGATTGACCTTCTTCAAGCCAGAGCTTTGTCTCAGTTATGACGTCAATCAACTTCAATCCCTTTGAAAATTGGTTTTCGAAACCTCCTAATCCCATTCCTCCTCTTAATCTCATTGCATTTAGAGATTCGTTGTCTCAGAAATCCTCTACGTCCCCAAATTTTGCTTCAAGAAGTCTCTCAAATCTCTTCAGGAAGCCAAAGAAAGCACCCGAACCGGGGTATTACGAAAAAATGCTAGAACAATTCTACTGGGAATGCGATAATTTACCCGACTACAGACATGCTCCCGAGGTTGAGAAAATTCTCAAGGAAGATCCCCTTTTCGAGAACAAAGAGAATCCTACGCAAGAGGAGCTCGAAAAGAACGAGAAACTCTGGAAAGCGATACGAGATAGCCCTGTTGTGCAATTTCTGGAACGTGCGGAGGAAATTGAAGCCAAGCACAATGAAATGAAGCTCAAAGAAAACGAGAATCCATTCAGAAACGAGGACAAGGAGCTGTGGAGGGCAATTCCTCATGTGCCTGGTCTTGATGGGCGGCCTATGCCGAGGAAAGCGATAAAGTCAAAAAGAGAATCCGACGCCAAGTTCTGGGATTTTGCCAGACAGTTCTTTTTTGGGCTCTGGGGCTTCCGTCAAAGACCTTATCCACCTGGTCGCCCGATCGATGTTGCTCAGGCCATTGGGTATAAGCACCTCGAGAGGCGGTACTATGATTGTAAGTCTAAGTTGGCGTGGTTATTAGAAGAATGTGCTCTGATTTTGCCATTTACTTCAGCTAAATTGAGCTGCGGCAGCCACATTGACATGTGCTATCTCAGTGCCATCGCTATATGGACTCATTTAGAGTTGTTATGTTCTTCTGTCCAAGTTCCTTAGATCTTCACTACATCACTTTTTGGTGCTACACTAAAAAGTATCAGACAGTCATTTTGCTTGATCTTGATTTTTTCCCCTCGGTTTCACATTTACACTGTTTGAGATACCTGCATAATCTTCGTTTCACTTTTGTTTGATCAGCATCATGGAGTTGCTAAGTCATTTGAAAGTTATTTCCAAGTCTTGTATTGTATTCATGGTTTTTAGCATGATTGTTTTTTACTTTGCAGTTATAATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTAGGTCGTACTCGGGGACCATTGGAACTAATTAACCTGAAAACAGCCTGGGGTGGTGGGATTATTGACAAGGATACATTTATCTGGGGGGAGGACATGGACGAATGGGCGCCAATTCACATGGTTTACGGGTTGGAGCGTGCAATTGCCACTTGGGAAGGTCAGTCTAGCTCCCATTACTATCTCTTCATTATACTGGTATCGAGAAATTTGCCCTGAAGTTGTAATATCAATTACTGTATGCTTAACTTGAGCTGTACTTTTCATTAGTCTTTAAGTAGATCAAGAAATGATAGTTCAAGATGGAGCGTTCCTTTCAGTTTGTTGAAGACATATCTCAAACCGAATTAGAACATACTTTCTTTCTTTTAAATTTTCATTATGGCTACATCACGACAGTCAAACTTTAAACATGACATGTCATGAGCAAACATTTGCAGTGCATGCTGTCTAAAGATGCTCTTTTTGGGCAGACAGAACAGCCTCTAATTGGTTGACCTGCTGATTTCCGATGTAGGAGTTTACTATTAGCTGGGTTTTTGGCTGAGGAACAAAAGATCATTTTTTTTATGTGTTCTTTAATTGTTGTTGGAATCAGTAAAGATAAATATACTCCCGAATACACCTGCTTACATTCTAGAATGTGGTGTACATCACTAGTAGAGCTTAGAACAAATTCAAATGACACCATATATAGAAAAAACAGAACGTCACAGTCAATATCATTCTGATTGTTACTTACTTTATTTGTGACTAGCTGGCTTCTTTAGCGCAGTTCCTATCTTTATGTTCTAATCGTATTTGTTACGTCTCATTTATTGACGAACCTCTTACAAAGTGGTTTACTGGCTCATCAATGTTTATGCAGTTAGACTTGGTGCTGCTGCCACTGCTTTTCTTCACAAATTGCAGAAAGGCATACCTCCATGGGTTCCTGTTAAGGGACATGAGAAGAAAACCTACAAGCAACTGCAACAAGAGGCTTTAGAGAGCAAGAGACGAGATCTAGCAGTATTAGCAGCTAATGACGGTGTTTGGCCAGGCGTTAGAATTCCTAGCCATGCACTTTTTCTCTGGGCAAGTGGAACGGAACTGACATCCATTTTGGAGGCAGATCACATGCCAAACAAGTACATCCCGAGGGATCTAAGGTATGTGCCTAAACCCCACATTCTGTTCATTATGTCCCTATTGTCTGAAGTACAACCATTTTAGTCGCATCAGTTATAAATCCAGGGTGATAACTAGACAACGGCACTTGAGATCCTTGTGGTAAAGTCGGTGGTGATTAAAGTCAAGGTGGTTGGCAAATGTATATTCTATATACTTTAAATAAAACCATATCATTACATTCTAGGAAATCCTGAGGATTTCTTCAGGCTAGTTATTTGATTTCATCTATGGAAGAAATACGAAAGCTTATTTCCCTTTAATAGTTCATTCCATTGCTGAGGATGAAATGCCCTTAAGATTGGGCGTTGCAGTAACCTTTTGGATATATAATCTAGCTTTGGAGGTCTCTTCTTCATTAGATTCTTATACATAAGATGTGGTTGTTGTGTGATATGACAGGTATAAATTAGCTAAAATTATACCCGGGTTAAGACCATGGGAGGTTTTAAGCGTGGAGCAAGCAATGGACCACCTAACATATAATGGCGAATGGCATCGTGAACCTCTTGGATCATTCAATACAGGTCCTCCATACATCAAGGAATGGAATAGAGATATATGGGTACGGTACATACTATGCACATGTTCTTACAACTTTGCTGATCCTGAATTGGCACCCAAAAAAATAAGAAAAAGAGCAACCATGTAGATACACGTTTGTTACAGAACTTCTCTTTGTTGTTACATAAAAATTCAGTTTAATTTTGAATCTGGATGAGGGTAATCAGGTCGAGTAATGAAACGTCTGTCCCATTCTTGCAGGAATTTTTAAAGATTTACATGGATGTCAGCGCTCTGTTTTACAGCGAAATGGAGGAGGTGGTTCGTGGTTTCAGAAAAATAATGGACAAGGTTTCGGCCAATATCACTGCCAGAAGAATTAGGCGGAAGCAGAGGAAGTTCGCGATGGAGAGAGCTGAATCATTGGGATATGACTTCAAAAAAATCAAATACGATCCATAAATTATCATTCTCTATCGGGATTAAGGGAGTGATTTCCAAAAAATCTAAGTCTCGTCCAAACTTGATTGTAGTTTTCACATGTAGGTGAGTTTCTGAATTGGATTAGGAAGCTCAGATCCTCACCGTCCAAAGAACCCCAATTGGTCTTGTTTGTGACATTTTTGGGTTCCTTTTGTAACATTTAAGCAGTATTTTCAAGGATAAACGTAAAGTAAATCTTGAGTAGTTTCACATAAACACAATGGTCATTATGTTTGCACAAAAATGGTTTCAATACCATAATGTCAAGTGCTTATCTAATATTTCAAGCTTTAAGGGGAATCAAAATGTAAATTATTAGTGATTATAAGTTTGAATATTAATTTGGGTCCCTATTTTATCCGCTATACTTTCAATAAATCTTATTTTTAATAAGATAAAAATTTGATTGTATGGAAGATTAATTAGTGGTCATTAAAGTTTGGCATTTCTCCATTGTTTCATTTATTGCTAATTTGAAAACTTAATTGTTATATTAGTTTATGGTTGAAAAGAAAATGTGCGGAGGCGGACATACGCACACAAGTGTTGAGAGGTTTTAGGCCCATAACTCATAGCCGAGCCGATAGGAATGAGGCCTATTTGTCTGCAGCTGGGCCCAATAAAATGTGGTTCATATTAAAAGAAAAAAAAAATTATTAGGCAAAGATCAAATTGATAAGGGTGTGGAGTTTGTATATAATAAAAGAAAATGATTGGACA
mRNA sequence
ATGACGTCAATCAACTTCAATCCCTTTGAAAATTGGTTTTCGAAACCTCCTAATCCCATTCCTCCTCTTAATCTCATTGCATTTAGAGATTCGTTGTCTCAGAAATCCTCTACGTCCCCAAATTTTGCTTCAAGAAGTCTCTCAAATCTCTTCAGGAAGCCAAAGAAAGCACCCGAACCGGGGTATTACGAAAAAATGCTAGAACAATTCTACTGGGAATGCGATAATTTACCCGACTACAGACATGCTCCCGAGGTTGAGAAAATTCTCAAGGAAGATCCCCTTTTCGAGAACAAAGAGAATCCTACGCAAGAGGAGCTCGAAAAGAACGAGAAACTCTGGAAAGCGATACGAGATAGCCCTGTTGTGCAATTTCTGGAACGTGCGGAGGAAATTGAAGCCAAGCACAATGAAATGAAGCTCAAAGAAAACGAGAATCCATTCAGAAACGAGGACAAGGAGCTGTGGAGGGCAATTCCTCATGTGCCTGGTCTTGATGGGCGGCCTATGCCGAGGAAAGCGATAAAGTCAAAAAGAGAATCCGACGCCAAGTTCTGGGATTTTGCCAGACAGTTCTTTTTTGGGCTCTGGGGCTTCCGTCAAAGACCTTATCCACCTGGTCGCCCGATCGATGTTGCTCAGGCCATTGGGTATAAGCACCTCGAGAGGCGGTACTATGATTTTATAATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTAGGTCGTACTCGGGGACCATTGGAACTAATTAACCTGAAAACAGCCTGGGGTGGTGGGATTATTGACAAGGATACATTTATCTGGGGGGAGGACATGGACGAATGGGCGCCAATTCACATGGTTTACGGGTTGGAGCGTGCAATTGCCACTTGGGAAGTTAGACTTGGTGCTGCTGCCACTGCTTTTCTTCACAAATTGCAGAAAGGCATACCTCCATGGGTTCCTGTTAAGGGACATGAGAAGAAAACCTACAAGCAACTGCAACAAGAGGCTTTAGAGAGCAAGAGACGAGATCTAGCAGTATTAGCAGCTAATGACGGTGTTTGGCCAGGCGTTAGAATTCCTAGCCATGCACTTTTTCTCTGGGCAAGTGGAACGGAACTGACATCCATTTTGGAGGCAGATCACATGCCAAACAAGTACATCCCGAGGGATCTAAGGTATAAATTAGCTAAAATTATACCCGGGTTAAGACCATGGGAGGTTTTAAGCGTGGAGCAAGCAATGGACCACCTAACATATAATGGCGAATGGCATCGTGAACCTCTTGGATCATTCAATACAGGTCCTCCATACATCAAGGAATGGAATAGAGATATATGGGAATTTTTAAAGATTTACATGGATGTCAGCGCTCTGTTTTACAGCGAAATGGAGGAGGTGGTTCGTGGTTTCAGAAAAATAATGGACAAGGTTTCGGCCAATATCACTGCCAGAAGAATTAGGCGGAAGCAGAGGAAGTTCGCGATGGAGAGAGCTGAATCATTGGGATATGACTTCAAAAAAATCAAATACGATCCATAA
Coding sequence (CDS)
ATGACGTCAATCAACTTCAATCCCTTTGAAAATTGGTTTTCGAAACCTCCTAATCCCATTCCTCCTCTTAATCTCATTGCATTTAGAGATTCGTTGTCTCAGAAATCCTCTACGTCCCCAAATTTTGCTTCAAGAAGTCTCTCAAATCTCTTCAGGAAGCCAAAGAAAGCACCCGAACCGGGGTATTACGAAAAAATGCTAGAACAATTCTACTGGGAATGCGATAATTTACCCGACTACAGACATGCTCCCGAGGTTGAGAAAATTCTCAAGGAAGATCCCCTTTTCGAGAACAAAGAGAATCCTACGCAAGAGGAGCTCGAAAAGAACGAGAAACTCTGGAAAGCGATACGAGATAGCCCTGTTGTGCAATTTCTGGAACGTGCGGAGGAAATTGAAGCCAAGCACAATGAAATGAAGCTCAAAGAAAACGAGAATCCATTCAGAAACGAGGACAAGGAGCTGTGGAGGGCAATTCCTCATGTGCCTGGTCTTGATGGGCGGCCTATGCCGAGGAAAGCGATAAAGTCAAAAAGAGAATCCGACGCCAAGTTCTGGGATTTTGCCAGACAGTTCTTTTTTGGGCTCTGGGGCTTCCGTCAAAGACCTTATCCACCTGGTCGCCCGATCGATGTTGCTCAGGCCATTGGGTATAAGCACCTCGAGAGGCGGTACTATGATTTTATAATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTAGGTCGTACTCGGGGACCATTGGAACTAATTAACCTGAAAACAGCCTGGGGTGGTGGGATTATTGACAAGGATACATTTATCTGGGGGGAGGACATGGACGAATGGGCGCCAATTCACATGGTTTACGGGTTGGAGCGTGCAATTGCCACTTGGGAAGTTAGACTTGGTGCTGCTGCCACTGCTTTTCTTCACAAATTGCAGAAAGGCATACCTCCATGGGTTCCTGTTAAGGGACATGAGAAGAAAACCTACAAGCAACTGCAACAAGAGGCTTTAGAGAGCAAGAGACGAGATCTAGCAGTATTAGCAGCTAATGACGGTGTTTGGCCAGGCGTTAGAATTCCTAGCCATGCACTTTTTCTCTGGGCAAGTGGAACGGAACTGACATCCATTTTGGAGGCAGATCACATGCCAAACAAGTACATCCCGAGGGATCTAAGGTATAAATTAGCTAAAATTATACCCGGGTTAAGACCATGGGAGGTTTTAAGCGTGGAGCAAGCAATGGACCACCTAACATATAATGGCGAATGGCATCGTGAACCTCTTGGATCATTCAATACAGGTCCTCCATACATCAAGGAATGGAATAGAGATATATGGGAATTTTTAAAGATTTACATGGATGTCAGCGCTCTGTTTTACAGCGAAATGGAGGAGGTGGTTCGTGGTTTCAGAAAAATAATGGACAAGGTTTCGGCCAATATCACTGCCAGAAGAATTAGGCGGAAGCAGAGGAAGTTCGCGATGGAGAGAGCTGAATCATTGGGATATGACTTCAAAAAAATCAAATACGATCCATAA
Protein sequence
MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITARRIRRKQRKFAMERAESLGYDFKKIKYDP*
Homology
BLAST of CsaV3_3G033460 vs. NCBI nr
Match:
XP_004137697.1 (protein TIC 56, chloroplastic [Cucumis sativus] >KGN58726.1 hypothetical protein Csa_002042 [Cucumis sativus])
HSP 1 Score: 1065.4 bits (2754), Expect = 1.5e-307
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEP 60
MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEP
Sbjct: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEP 60
Query: 61 GYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDS 120
GYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDS
Sbjct: 61 GYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDS 120
Query: 121 PVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRE 180
PVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRE
Sbjct: 121 PVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRE 180
Query: 181 SDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDR 240
SDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDR
Sbjct: 181 SDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDR 240
Query: 241 LGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAA 300
LGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAA
Sbjct: 241 LGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAA 300
Query: 301 TAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHAL 360
TAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHAL
Sbjct: 301 TAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHAL 360
Query: 361 FLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWH 420
FLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWH
Sbjct: 361 FLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWH 420
Query: 421 REPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITAR 480
REPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITAR
Sbjct: 421 REPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITAR 480
Query: 481 RIRRKQRKFAMERAESLGYDFKKIKYDP 509
RIRRKQRKFAMERAESLGYDFKKIKYDP
Sbjct: 481 RIRRKQRKFAMERAESLGYDFKKIKYDP 508
BLAST of CsaV3_3G033460 vs. NCBI nr
Match:
XP_022145657.1 (protein TIC 56, chloroplastic [Momordica charantia])
HSP 1 Score: 894.0 bits (2309), Expect = 5.9e-256
Identity = 422/511 (82.58%), Postives = 464/511 (90.80%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFR---KPKKA 60
M SINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN F+ KPKKA
Sbjct: 1 MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQF+WECDNLPDYRH PEVEKIL EDP+ +NKENP++EE+EKNEKLWKA
Sbjct: 61 SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+R SPVVQFLERAEEI AK+NE++LKENENP+R+EDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+KRES+ KFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIMRSGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG+ELTSILEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAM+ +TYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHREPLG++ TGPPYI+ WN+D+ +I+ ++S Y++ME + GF KIMDKV A+
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYD 508
AR RRK+R+ A++RAE F ++K D
Sbjct: 481 AAARDARRKERREALKRAEFERMIFGRVKKD 511
BLAST of CsaV3_3G033460 vs. NCBI nr
Match:
XP_038905710.1 (protein TIC 56, chloroplastic [Benincasa hispida])
HSP 1 Score: 891.0 bits (2301), Expect = 5.0e-255
Identity = 423/511 (82.78%), Postives = 461/511 (90.22%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFR---KPKKA 60
M SINFNPFENWFS+ PNPIP NLIAFRDSLSQKSS SPNFASRSLSN+F+ KP+KA
Sbjct: 1 MASINFNPFENWFSRRPNPIPSHNLIAFRDSLSQKSSPSPNFASRSLSNVFKKRQKPEKA 60
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQFYWEC+NLPDYRHAPEVEKIL EDP+FENKENPTQEELEKNEKLWK
Sbjct: 61 SDEPGYYGKMLEQFYWECENLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKG 120
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
IRDSPVV+FLERAEEI AK+NE++LKENENP+R+EDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 IRDSPVVKFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+KRESD KFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIMRSGGWY
Sbjct: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG+ELTS LEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAM+ +TYN
Sbjct: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHREPLG++ TGPPYI+ WN+D+ + + +S Y++ME + GF KIM+KV +
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRTFFSLSTRVYNKMERTIPGFSKIMEKVQGD 480
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYD 508
AR RRK+R+ AM+RAE F +++ D
Sbjct: 481 AAARNARRKERREAMKRAEFERKIFGEVRND 511
BLAST of CsaV3_3G033460 vs. NCBI nr
Match:
TYK24935.1 (protein TIC 56 [Cucumis melo var. makuwa])
HSP 1 Score: 883.6 bits (2282), Expect = 7.9e-253
Identity = 420/512 (82.03%), Postives = 459/512 (89.65%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLF---RKPKKA 60
MTSINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN+F RKPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQFYWECDNLPDYRH PEVEKIL EDP+FENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+RDSPVVQFLERAEEI AK+NE++LK NENP+RNEDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+ RESD KFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK LE+RYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAMD +TYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHRE LGS++TGPPYI+EWN++ + Y+ +SA + +E + GF K+M+K+ A+
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYDP 509
AR RR++R+ A RAE F K++ DP
Sbjct: 595 RNARYRRRRERRKARRRAELKRKIFVKLRNDP 626
BLAST of CsaV3_3G033460 vs. NCBI nr
Match:
XP_008442373.1 (PREDICTED: protein TIC 56, chloroplastic [Cucumis melo])
HSP 1 Score: 883.6 bits (2282), Expect = 7.9e-253
Identity = 420/512 (82.03%), Postives = 459/512 (89.65%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLF---RKPKKA 60
MTSINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN+F RKPKKA
Sbjct: 1 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQFYWECDNLPDYRH PEVEKIL EDP+FENKE PTQEELEKNEKLWKA
Sbjct: 61 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+RDSPVVQFLERAEEI AK+NE++LK NENP+RNEDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+ RESD KFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK LE+RYYDFIM+SGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAMD +TYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHRE LGS++TGPPYI+EWN++ + Y+ +SA + +E + GF K+M+K+ A+
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYDP 509
AR RR++R+ A RAE F K++ DP
Sbjct: 481 RNARYRRRRERRKARRRAELKRKIFVKLRNDP 512
BLAST of CsaV3_3G033460 vs. ExPASy Swiss-Prot
Match:
Q7Y1W1 (Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1)
HSP 1 Score: 736.1 bits (1899), Expect = 2.7e-211
Identity = 338/502 (67.33%), Postives = 407/502 (81.08%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKK---- 60
M+S+NFNPF+NWF KPPNP+P +N ++ DS KS SPNFAS L +K K
Sbjct: 1 MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQ-SPNFASIGLPKFSKKSPKPETA 60
Query: 61 -APEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWK 120
EPG Y+++ EQF WEC+N+PDYRH PEV+K+L EDP+FE KENP+ EE+E +K W+
Sbjct: 61 GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120
Query: 121 AIRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAI 180
+ R SPVVQF+ RAEEI N+M+L++N+ P+R EDK+ WRAIPHVPG DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180
Query: 181 KSKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGW 240
KSK ESD KFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIM++GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240
Query: 241 YYKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVR 300
+YKDRLGR+RGP E+I LKTA+G GIID+DTFIWGEDMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300
Query: 301 LGAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRI 360
LGAAATAFLHKLQKGIPPWVP+KG E KTYKQLQ+EA+ESK+RD+AVL AN GVWPGVR
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360
Query: 361 PSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTY 420
PSHALFLWASG+ELT++LE+DHMPNK+IP+ LR +LAK+IPGLRPWEV+S+EQAMD ++Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420
Query: 421 NGEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSA 480
GEW+REPLG++ TGPPYI+EWNR + +I+ ++S ++E V GF IMDKV
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480
Query: 481 NITARRIRRKQRKFAMERAESL 498
+ R RR +R+ R E L
Sbjct: 481 DYDKRIARRMKRREEELREEDL 501
BLAST of CsaV3_3G033460 vs. ExPASy TrEMBL
Match:
A0A0A0LF71 (GYF_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G730900 PE=4 SV=1)
HSP 1 Score: 1065.4 bits (2754), Expect = 7.1e-308
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEP 60
MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEP
Sbjct: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKKAPEP 60
Query: 61 GYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDS 120
GYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDS
Sbjct: 61 GYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKAIRDS 120
Query: 121 PVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRE 180
PVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRE
Sbjct: 121 PVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIKSKRE 180
Query: 181 SDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDR 240
SDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDR
Sbjct: 181 SDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWYYKDR 240
Query: 241 LGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAA 300
LGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAA
Sbjct: 241 LGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAA 300
Query: 301 TAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHAL 360
TAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHAL
Sbjct: 301 TAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHAL 360
Query: 361 FLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWH 420
FLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWH
Sbjct: 361 FLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYNGEWH 420
Query: 421 REPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITAR 480
REPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITAR
Sbjct: 421 REPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSANITAR 480
Query: 481 RIRRKQRKFAMERAESLGYDFKKIKYDP 509
RIRRKQRKFAMERAESLGYDFKKIKYDP
Sbjct: 481 RIRRKQRKFAMERAESLGYDFKKIKYDP 508
BLAST of CsaV3_3G033460 vs. ExPASy TrEMBL
Match:
A0A6J1CXB7 (protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=4 SV=1)
HSP 1 Score: 894.0 bits (2309), Expect = 2.8e-256
Identity = 422/511 (82.58%), Postives = 464/511 (90.80%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFR---KPKKA 60
M SINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN F+ KPKKA
Sbjct: 1 MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQF+WECDNLPDYRH PEVEKIL EDP+ +NKENP++EE+EKNEKLWKA
Sbjct: 61 SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+R SPVVQFLERAEEI AK+NE++LKENENP+R+EDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+KRES+ KFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIMRSGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG+ELTSILEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAM+ +TYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHREPLG++ TGPPYI+ WN+D+ +I+ ++S Y++ME + GF KIMDKV A+
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYD 508
AR RRK+R+ A++RAE F ++K D
Sbjct: 481 AAARDARRKERREALKRAEFERMIFGRVKKD 511
BLAST of CsaV3_3G033460 vs. ExPASy TrEMBL
Match:
A0A5D3DMT8 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500 PE=4 SV=1)
HSP 1 Score: 883.6 bits (2282), Expect = 3.8e-253
Identity = 420/512 (82.03%), Postives = 459/512 (89.65%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLF---RKPKKA 60
MTSINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN+F RKPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQFYWECDNLPDYRH PEVEKIL EDP+FENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+RDSPVVQFLERAEEI AK+NE++LK NENP+RNEDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+ RESD KFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK LE+RYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAMD +TYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHRE LGS++TGPPYI+EWN++ + Y+ +SA + +E + GF K+M+K+ A+
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYDP 509
AR RR++R+ A RAE F K++ DP
Sbjct: 595 RNARYRRRRERRKARRRAELKRKIFVKLRNDP 626
BLAST of CsaV3_3G033460 vs. ExPASy TrEMBL
Match:
A0A1S3B5J8 (protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1)
HSP 1 Score: 883.6 bits (2282), Expect = 3.8e-253
Identity = 420/512 (82.03%), Postives = 459/512 (89.65%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLF---RKPKKA 60
MTSINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN+F RKPKKA
Sbjct: 1 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQFYWECDNLPDYRH PEVEKIL EDP+FENKE PTQEELEKNEKLWKA
Sbjct: 61 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+RDSPVVQFLERAEEI AK+NE++LK NENP+RNEDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+ RESD KFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK LE+RYYDFIM+SGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAMD +TYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHRE LGS++TGPPYI+EWN++ + Y+ +SA + +E + GF K+M+K+ A+
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYDP 509
AR RR++R+ A RAE F K++ DP
Sbjct: 481 RNARYRRRRERRKARRRAELKRKIFVKLRNDP 512
BLAST of CsaV3_3G033460 vs. ExPASy TrEMBL
Match:
A0A5A7TQS2 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005560 PE=4 SV=1)
HSP 1 Score: 882.9 bits (2280), Expect = 6.5e-253
Identity = 420/512 (82.03%), Postives = 458/512 (89.45%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLF---RKPKKA 60
MTSINFNPFENWFS+ PNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN+F RKPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174
Query: 61 -PEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWKA 120
EPGYY KMLEQFYWECDNLPDYRH PEVEKIL EDP+FENKE PTQEELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234
Query: 121 IRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAIK 180
+RDSPVVQFLERAEEI AK+NE++LK NENP+RNEDK+LWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294
Query: 181 SKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGWY 240
+ RESD KFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK LE+RYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354
Query: 241 YKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
YKDRLGRTRGPLELI LKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414
Query: 301 GAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
GAAATAFLHKLQKGIPPWVP+KG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474
Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTYN 420
SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAMD +TYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534
Query: 421 GEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSAN 480
GEWHRE LGS++TGPPYI+EWN++ + Y+ +SA + +E + GF K+M+K+ A+
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594
Query: 481 ITARRIRRKQRKFAMERAESLGYDFKKIKYDP 509
AR RR++R A RAE F K++ DP
Sbjct: 595 RNARYRRRRERSKARRRAELKRKIFVKLRNDP 626
BLAST of CsaV3_3G033460 vs. TAIR 10
Match:
AT5G01590.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )
HSP 1 Score: 736.1 bits (1899), Expect = 1.9e-212
Identity = 338/502 (67.33%), Postives = 407/502 (81.08%), Query Frame = 0
Query: 1 MTSINFNPFENWFSKPPNPIPPLNLIAFRDSLSQKSSTSPNFASRSLSNLFRKPKK---- 60
M+S+NFNPF+NWF KPPNP+P +N ++ DS KS SPNFAS L +K K
Sbjct: 1 MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQ-SPNFASIGLPKFSKKSPKPETA 60
Query: 61 -APEPGYYEKMLEQFYWECDNLPDYRHAPEVEKILKEDPLFENKENPTQEELEKNEKLWK 120
EPG Y+++ EQF WEC+N+PDYRH PEV+K+L EDP+FE KENP+ EE+E +K W+
Sbjct: 61 GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120
Query: 121 AIRDSPVVQFLERAEEIEAKHNEMKLKENENPFRNEDKELWRAIPHVPGLDGRPMPRKAI 180
+ R SPVVQF+ RAEEI N+M+L++N+ P+R EDK+ WRAIPHVPG DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180
Query: 181 KSKRESDAKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKHLERRYYDFIMRSGGW 240
KSK ESD KFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYK LE+RYYDFIM++GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240
Query: 241 YYKDRLGRTRGPLELINLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVR 300
+YKDRLGR+RGP E+I LKTA+G GIID+DTFIWGEDMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300
Query: 301 LGAAATAFLHKLQKGIPPWVPVKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRI 360
LGAAATAFLHKLQKGIPPWVP+KG E KTYKQLQ+EA+ESK+RD+AVL AN GVWPGVR
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360
Query: 361 PSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMDHLTY 420
PSHALFLWASG+ELT++LE+DHMPNK+IP+ LR +LAK+IPGLRPWEV+S+EQAMD ++Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420
Query: 421 NGEWHREPLGSFNTGPPYIKEWNRDIWEFLKIYMDVSALFYSEMEEVVRGFRKIMDKVSA 480
GEW+REPLG++ TGPPYI+EWNR + +I+ ++S ++E V GF IMDKV
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480
Query: 481 NITARRIRRKQRKFAMERAESL 498
+ R RR +R+ R E L
Sbjct: 481 DYDKRIARRMKRREEELREEDL 501
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004137697.1 | 1.5e-307 | 100.00 | protein TIC 56, chloroplastic [Cucumis sativus] >KGN58726.1 hypothetical protein... | [more] |
XP_022145657.1 | 5.9e-256 | 82.58 | protein TIC 56, chloroplastic [Momordica charantia] | [more] |
XP_038905710.1 | 5.0e-255 | 82.78 | protein TIC 56, chloroplastic [Benincasa hispida] | [more] |
TYK24935.1 | 7.9e-253 | 82.03 | protein TIC 56 [Cucumis melo var. makuwa] | [more] |
XP_008442373.1 | 7.9e-253 | 82.03 | PREDICTED: protein TIC 56, chloroplastic [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Q7Y1W1 | 2.7e-211 | 67.33 | Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LF71 | 7.1e-308 | 100.00 | GYF_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G730900 PE=4 ... | [more] |
A0A6J1CXB7 | 2.8e-256 | 82.58 | protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=... | [more] |
A0A5D3DMT8 | 3.8e-253 | 82.03 | Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500... | [more] |
A0A1S3B5J8 | 3.8e-253 | 82.03 | protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1 | [more] |
A0A5A7TQS2 | 6.5e-253 | 82.03 | Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00556... | [more] |
Match Name | E-value | Identity | Description | |
AT5G01590.1 | 1.9e-212 | 67.33 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |