CsaV3_3G031610 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G031610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr3: 27332339 .. 27332503 (+)
RNA-Seq Expression	CsaV3_3G031610
Synteny	CsaV3_3G031610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGTGAGGTTGGAAGAGAAGCAGGAAGTAGCAGTTGGTAATACCAATCAGCAGATTCGGCACTGTGCAATTTGTCGCTTCTTGAGTGGTAGAGTCGATTGGATTCGATTATGGGCCTTCCTTACGATGCCAATTGCCATGCCAATAGCCAACCCAACCATG

mRNA sequence

ATGCCTGTGAGGTTGGAAGAGAAGCAGGAAGTAGCAGTTGGTAATACCAATCAGCAGATTCGGCACTGTGCAATTTGTCGCTTCTTGAGTGGTAGAGTCGATTGGATTCGATTATGGGCCTTCCTTACGATGCCAATTGCCATGCCAATAGCCAACCCAACCATG

Coding sequence (CDS)

ATGCCTGTGAGGTTGGAAGAGAAGCAGGAAGTAGCAGTTGGTAATACCAATCAGCAGATTCGGCACTGTGCAATTTGTCGCTTCTTGAGTGGTAGAGTCGATTGGATTCGATTATGGGCCTTCCTTACGATGCCAATTGCCATGCCAATAGCCAACCCAACCATG

Protein sequence

MPVRLEEKQEVAVGNTNQQIRHCAICRFLSGRVDWIRLWAFLTMPIAMPIANPTM

Homology

[Close]

BLAST of CsaV3_3G031610 vs. NCBI nr
Match: KAE8650915.1 (hypothetical protein Csa_001010, partial [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 1.3e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MPVRLEEKQEVAVGNTNQQIRHCAICRFLSGRVDWIRLWAFLTMPIAMPIANPTM 56
          MPVRLEEKQEVAVGNTNQQIRHCAICRFLSGRVDWIRLWAFLTMPIAMPIANPTM
Sbjct: 1  MPVRLEEKQEVAVGNTNQQIRHCAICRFLSGRVDWIRLWAFLTMPIAMPIANPTM 55

The following BLAST results are available for this feature:

BLAST of CsaV3_3G031610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650915.1	1.3e-23	100.00	hypothetical protein Csa_001010, partial [Cucumis sativus]	[more]

BLAST of CsaV3_3G031610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G031610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G031610 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G031610.1	CsaV3_3G031610.1	mRNA