CsaV3_3G031600 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGATTACATCTCTCGGACTTGAAAAAGAAAAAACCATGGTTGGGTTGGCTATTGGCATGGCAATTGGCATCGTAAGGAAGGCCCATAATCGAATCCAATCGACTCTACCACTCAAGAAGCGACAAATTGCACAGTGCCGAATCTGCTGATTGGTATTACCAACTGCTACTTCCTGCTTCTCTTCCAACCTCACAGGCATCCAAATTTATGTGACCACTCCCCATTAATTATATCATCAACAACAACCAAACCCCATTTCCCTATTTGATCTTAAGCCCATCCTTCACCCAATTTCAGCTTGAGGGGTTGGAGGATTCGTCTTTGATTTCTCTTAAAAATGTTCGAATCGCCTGTGGAAGAAGGGTGGCGGTATTGGGTCAGATGGCAAGTTCCTGTTTGTGGTCTAATAATCGCCATTCCATGTGCTTTTGCTTTGAAATTCATCAGGAAGTCAATGGCTAAGCCTCTGCTTCTCTCTGATTTGTGGTCTACTCATTGGAGGCATCTTAGTCCTTTATGGCTTTTACTTTACAGGGCTTTTGCTTTTGTTTGCTGTGTTCAGTTACTGTATGAGATTGTTGCCTTGCATGGACCTTTTGTCTTCTTTTTCTACACTCAGTAAGTTTAATTCACTTCTAAATTGTCTTCTCCCTGACTTGGTTTGTAGGGAAACAATGGAACGTGAAGGACTTAGCATTGATTTTCATGAATAAGTTTGGAACAAGAGTTCTTAAACTATCTGGGTTTTTCCTCTTTTTTTCTTTCTTTCTTTTTGTCTAATTCTTTGTTTCTTTGGCGGAACTGATTTTTGTAGGTGGACAATGGCTTTAGTAGCAATCTATTTTGCGGTATGTCTGTTATCAATTTGGTTCATATAGTTTTGGTTGAGTTTCAATGTAGTCCCTTTAATTGTTTAGTTTTAATGTACTTATAATGTTAACATTTTTCAATTTATCACTTAGTTGAGTTACAAAGGATGCAGTTAATATGTTAGTGTTAGCAAGTTTGTATATGAAGTGTAATCGAAGATGGAGTTATTCGATAAATATGCAAAATAGAAAGAAAAAAATTAAAAACATATTTCCTTAATAATTATACAAACTTCAATAACGTTTACAGTAGAAGTTAGTCGTTTAACACCAACTTACAAAGTTGGTGGGCCAAATAGCCCCTTCACACCTTCACCTCCACGGAGAAATTTCATCTTAAAACTTTATACTCCAAGCACATATTAACTTTAAACTTAGTTATGCAATTAGTTAAACCTCATCTTTTTAGTTTCTCAATATGCTCATTCTCACTTATTTCACTCGACAATAGGCCGTAATAAGAAACATTAGCTCATTGCCACATACTTAATATTAGTACAACTTGTAACGACTCTACGAACGATGACAGGCAATTTGTGAGGTTCAATCAAATTTTAGGGTCTATGTTAGAAGTTTTAAAATCATTGGAATAAAGTTGAAAGTTCAGTAAGTATGAGTATAGGGACCCAAATGAAACCAAATTAATAATTTATCTAAAAGTTCTGTTTAGAGTGCTTACAAATTATTTGAAGTTAGTTATTTTGCCTGAAAATTTTTCTGATTACTCTTGTTTACTTTGCAGCTGGGGACAGTTGTATCTGCATATGGGTATTGGTGTCCTTCCAGGAAAACCCATTCCAAAAACGAGGAGGATGTTAAACTCATGGAAAAAGATCTGAAAAAGAATGTAGACATTGTCAAAGAGGATACCATAAAAGTGCAAAACGAATGTGCTCAACAGGAATTTCAGGAGAAAGCAGGATGTTTAGGAACTCTTATGCAAATGGCATATCTGGTTCATTCCAAATCACCTCTCTACACTACGATCTTTTGTTATTCCTCAACATTTTGATCAGAATAGTTTATGTATATGTGTCTATCCTCAATATATCTCTGTTGCTTAGTGGGTCTATATATAATACTTCATAAGTGCCTGCATTGCTGCTAAATTGCTTGGTTGATGCATCATAGCTCATGAAGATGGAAAATTTGGACTCTATCAAATTAAGTTGAACTTCTTTCTGTAAAGAGTTTTCTGAGTTCCCTCTTTTCACCCTTTACAACAAATTTTAAGCTCATTGGCGGTTCTTGAGGATCTCGTCTCCTCTTTTGCGTTATGCCATTGCTAATAAAAGTTGTTTGTTGTTCTTTTAGAAGAATCTGTAGAATACTTGCGACATTATACTCGTTTTCTTCTTCTTTCTGTGAGCCTTTGCATTACCTGTACTTTTTATGCATTGCAGGCAGCAGCAGGTGCTTCTGTATTAACCGACGTAGTGTTTTGGTGCCTTCTCGTGCCATTTCTACTTGGTGAAAATTTCCAAGTCAGCCTGGTGTGTATTGACTTTCCTTGGTCAATTTGATTATCAGCCTGTAACACAATCTTTTCAGTAGTTCAGAATCCTTCTTATTCTTAGTTCCCTTTTAATCTTAATCAAGCTTGGTGACCAAAAATCTTGGTTAAATAACTTCATTATCATGCATAACTTCACATTATTAGTTCTTTGGATTGTGTTAAGATGAACATATACTCTGTAGAAACTATAACATGCACTACTATTACATTATGTATACGGCTATCTTCTAAATTACAAAAAGTGCCTCTCAACTTTTAAAACAAAATTACTCTCGAAAGTTGTAATATTACTATTGACTTTTCATAAATGCTTCAAAACTAACCTTGAAGTAAAAATTCATTAGAATGTTGGATGAAAATAGTGCTCTGGTAACCTAGAATTGAAGTTGGTACTCAGATTCCGATTCCAAGGTAGTTTTGAAACGTTTATTATATTGAAGGGTAATATTACAACTTTTGGAAGAGGAAGGTTCTAGTTGAATGGAATTCATTATGCTTGATGTAGGTCTTCTTATTATTTTCTTGAGCTGCGCTCACTATGATAATTTTCTTATATTTTGTTGCATTAGATTGATGGAAGTAACAGGTTATATGGATGATAAAATCTCAATCTACAGCAAGTTTCATTTGGTCTGGCATGTTATGGTTAAATCATCACACTACTACATCTACGTGCTTGAGCTATAAAGATAGTGTAAATTAGGCTCAAATATCGGCACAAACCCAAACACACGACGCATGCAAATAAAATTAAAATCACTGGTTTTGATACTATATTGAATCACTGCTACATCCGAGTGCTTGAATTGATAAGCAAGAGTAAATTTGATGTGCTTTATCTCTACATTTGTTAAAAGCCATTCTCTTAGCCGAATTTATAAAACTATGCATACTTTTTGTTGAGTTTACATTTATGTTAATAACAGTTTGAATCCCTCAAAACTCTTTTCATCTTACACTAGTGTAGAACAACATTCTAGTTTCCACTGCATACTTCACCTCCATTTCTTTTGTGTTATTTGTTCTTGGCAGTTGATTGGTTCCATCCATGCTCTGAATGCTGTTTTTCTTCTTGGAGATACTGCTATCAATAGCCTTGTAAGTATCACATGTTCAAGAAGAAACCAAAGTTCATATTCTCTCACTTTTTGGATCACAAAGACTCTTCAATTTCTTGTCCATGCTAAACCGAAATGCTTCGCTTTTGCAGTCATTTCCTTTCAGTGGTTTTGCATACTTCGTGGCCTTTGGCGGTCTCTATGTCGTTTTCCAATGGACCGTGCACGCGTGCTGTGTGAATTGGTATGCAATTGATTCTTGTTCTTGAGTTTCCTTTTAGTATCTTTCAAAAGAGAGAAAACAACAGACTTCTGATTACTTACCTCAGGTGGCCATATCCTTTCTTTGAGCTCAGTACACCTTGGGCTCCTCTCTGGTAAGTGCTGATTACAACTCTTGTCAAAATGGCACTAAATCCAAAAGTTTAAATTGATAATTGATAATTTATTTTCTTATATATTAACGGTCTTTGAAGAAAATACATAGATGAAAGTTAAGAATTTCACTTGAGAATTCGTCCTTGGATACCATGTTAAGTTACCACTAAGCTCAAAAACACAAATTAATCGGTTAAGATTTGTTTTGGATAGTTTATGTATATTATCAACACTTCCTTTTGCTTTTAAGTTCAAAAAATGGAAGAAAAAGAAAGGGCATCGTAGGTACCTTGAACACGGGATTTCCCTTTCGAGCTAATATAGTAGAATATGTTTAATATTTTACATACCATTTGAACATAGATATTTGATGTGTGATATTTTGCACTACAGGTACCTTGGCTTAGCAGTGATTCACATCCCCTGTTATGGAATATATGCTCTAATTGTGAAGGCAAAATATTCACTTCTGCCAAGATTATTTCCTCATGCTTTTGTCAAAACATTTTAGTTCTCTCTTTCTCTCTCTCTCTATATAAGAAATAATAATAATAATAATAAGTGGGTGGTGTTATATTATAAACCACTGGAAATGCAATGACTACACATTGAATTGGTGCATCGGACTCTTATATTCTATGCAAGCTGCATGATGTGTAATATAAAAACTAAATAATCTCCTGGTGTTGTTTACATT ATGTTCGAATCGCCTGTGGAAGAAGGGTGGCGGTATTGGGTCAGATGGCAAGTTCCTGTTTGTGGTCTAATAATCGCCATTCCATGTGCTTTTGCTTTGAAATTCATCAGGAAGTCAATGGCTAAGCCTCTGCTTCTCTCTGATTTGTGGTCTACTCATTGGAGGCATCTTAGTCCTTTATGGCTTTTACTTTACAGGGCTTTTGCTTTTGTTTGCTGTGTTCAGTTACTGTATGAGATTGTTGCCTTGCATGGACCTTTTGTCTTCTTTTTCTACACTCAGTGGACAATGGCTTTAGTAGCAATCTATTTTGCGCTGGGGACAGTTGTATCTGCATATGGGTATTGGTGTCCTTCCAGGAAAACCCATTCCAAAAACGAGGAGGATGTTAAACTCATGGAAAAAGATCTGAAAAAGAATGTAGACATTGTCAAAGAGGATACCATAAAAGTGCAAAACGAATGTGCTCAACAGGAATTTCAGGAGAAAGCAGGATGTTTAGGAACTCTTATGCAAATGGCATATCTGGCAGCAGCAGGTGCTTCTGTATTAACCGACGTAGTGTTTTGGTGCCTTCTCGTGCCATTTCTACTTGGTGAAAATTTCCAAGTCAGCCTGTTGATTGGTTCCATCCATGCTCTGAATGCTGTTTTTCTTCTTGGAGATACTGCTATCAATAGCCTTTCATTTCCTTTCAGTGGTTTTGCATACTTCGTGGCCTTTGGCGGTCTCTATGTCGTTTTCCAATGGACCGTGCACGCGTGCTGTGTGAATTGGTGGCCATATCCTTTCTTTGAGCTCAGTACACCTTGGGCTCCTCTCTGGTACCTTGGCTTAGCAGTGATTCACATCCCCTGTTATGGAATATATGCTCTAATTGTGAAGGCAAAATATTCACTTCTGCCAAGATTATTTCCTCATGCTTTTGTCAAAACATTTTAG ATGTTCGAATCGCCTGTGGAAGAAGGGTGGCGGTATTGGGTCAGATGGCAAGTTCCTGTTTGTGGTCTAATAATCGCCATTCCATGTGCTTTTGCTTTGAAATTCATCAGGAAGTCAATGGCTAAGCCTCTGCTTCTCTCTGATTTGTGGTCTACTCATTGGAGGCATCTTAGTCCTTTATGGCTTTTACTTTACAGGGCTTTTGCTTTTGTTTGCTGTGTTCAGTTACTGTATGAGATTGTTGCCTTGCATGGACCTTTTGTCTTCTTTTTCTACACTCAGTGGACAATGGCTTTAGTAGCAATCTATTTTGCGCTGGGGACAGTTGTATCTGCATATGGGTATTGGTGTCCTTCCAGGAAAACCCATTCCAAAAACGAGGAGGATGTTAAACTCATGGAAAAAGATCTGAAAAAGAATGTAGACATTGTCAAAGAGGATACCATAAAAGTGCAAAACGAATGTGCTCAACAGGAATTTCAGGAGAAAGCAGGATGTTTAGGAACTCTTATGCAAATGGCATATCTGGCAGCAGCAGGTGCTTCTGTATTAACCGACGTAGTGTTTTGGTGCCTTCTCGTGCCATTTCTACTTGGTGAAAATTTCCAAGTCAGCCTGTTGATTGGTTCCATCCATGCTCTGAATGCTGTTTTTCTTCTTGGAGATACTGCTATCAATAGCCTTTCATTTCCTTTCAGTGGTTTTGCATACTTCGTGGCCTTTGGCGGTCTCTATGTCGTTTTCCAATGGACCGTGCACGCGTGCTGTGTGAATTGGTGGCCATATCCTTTCTTTGAGCTCAGTACACCTTGGGCTCCTCTCTGGTACCTTGGCTTAGCAGTGATTCACATCCCCTGTTATGGAATATATGCTCTAATTGTGAAGGCAAAATATTCACTTCTGCCAAGATTATTTCCTCATGCTTTTGTCAAAACATTTTAG MFESPVEEGWRYWVRWQVPVCGLIIAIPCAFALKFIRKSMAKPLLLSDLWSTHWRHLSPLWLLLYRAFAFVCCVQLLYEIVALHGPFVFFFYTQWTMALVAIYFALGTVVSAYGYWCPSRKTHSKNEEDVKLMEKDLKKNVDIVKEDTIKVQNECAQQEFQEKAGCLGTLMQMAYLAAAGASVLTDVVFWCLLVPFLLGENFQVSLLIGSIHALNAVFLLGDTAINSLSFPFSGFAYFVAFGGLYVVFQWTVHACCVNWWPYPFFELSTPWAPLWYLGLAVIHIPCYGIYALIVKAKYSLLPRLFPHAFVKTF* Homology
BLAST of CsaV3_3G031600 vs. NCBI nr
Match: XP_031739149.1 (uncharacterized protein LOC101203588 isoform X1 [Cucumis sativus] >KGN58534.1 hypothetical protein Csa_002135 [Cucumis sativus]) HSP 1 Score: 643.7 bits (1659), Expect = 8.5e-181 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. NCBI nr
Match: XP_008447452.1 (PREDICTED: uncharacterized protein LOC103489896 [Cucumis melo] >KAA0038105.1 protein rolling stone-like [Cucumis melo var. makuwa] >TYK20503.1 protein rolling stone-like [Cucumis melo var. makuwa]) HSP 1 Score: 630.9 bits (1626), Expect = 5.7e-177 Identity = 305/313 (97.44%), Postives = 308/313 (98.40%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. NCBI nr
Match: XP_022934502.1 (uncharacterized protein LOC111441659 [Cucurbita moschata] >XP_022934503.1 uncharacterized protein LOC111441659 [Cucurbita moschata]) HSP 1 Score: 591.7 bits (1524), Expect = 3.8e-165 Identity = 284/313 (90.73%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. NCBI nr
Match: KAG6581320.1 (WD repeat-containing protein 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 588.6 bits (1516), Expect = 3.2e-164 Identity = 283/309 (91.59%), Postives = 294/309 (95.15%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. NCBI nr
Match: XP_022983515.1 (uncharacterized protein LOC111482095 [Cucurbita maxima]) HSP 1 Score: 583.9 bits (1504), Expect = 8.0e-163 Identity = 280/313 (89.46%), Postives = 295/313 (94.25%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. ExPASy TrEMBL
Match: A0A0A0LC98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G664580 PE=4 SV=1) HSP 1 Score: 643.7 bits (1659), Expect = 4.1e-181 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. ExPASy TrEMBL
Match: A0A5A7T9J9 (Protein rolling stone-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00770 PE=4 SV=1) HSP 1 Score: 630.9 bits (1626), Expect = 2.8e-177 Identity = 305/313 (97.44%), Postives = 308/313 (98.40%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. ExPASy TrEMBL
Match: A0A1S3BHG4 (uncharacterized protein LOC103489896 OS=Cucumis melo OX=3656 GN=LOC103489896 PE=4 SV=1) HSP 1 Score: 630.9 bits (1626), Expect = 2.8e-177 Identity = 305/313 (97.44%), Postives = 308/313 (98.40%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. ExPASy TrEMBL
Match: A0A6J1F2Y1 (uncharacterized protein LOC111441659 OS=Cucurbita moschata OX=3662 GN=LOC111441659 PE=4 SV=1) HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165 Identity = 284/313 (90.73%), Postives = 297/313 (94.89%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. ExPASy TrEMBL
Match: A0A6J1J627 (uncharacterized protein LOC111482095 OS=Cucurbita maxima OX=3661 GN=LOC111482095 PE=4 SV=1) HSP 1 Score: 583.9 bits (1504), Expect = 3.9e-163 Identity = 280/313 (89.46%), Postives = 295/313 (94.25%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. TAIR 10
Match: AT1G10660.2 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 211.5 bits (537), Expect = 1.0e-54 Identity = 122/308 (39.61%), Postives = 177/308 (57.47%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. TAIR 10
Match: AT1G10660.3 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 211.5 bits (537), Expect = 1.0e-54 Identity = 122/308 (39.61%), Postives = 177/308 (57.47%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. TAIR 10
Match: AT1G10660.4 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 211.5 bits (537), Expect = 1.0e-54 Identity = 122/308 (39.61%), Postives = 177/308 (57.47%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. TAIR 10
Match: AT1G10660.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 155 Blast hits to 154 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 139; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 211.5 bits (537), Expect = 1.0e-54 Identity = 122/308 (39.61%), Postives = 177/308 (57.47%), Query Frame = 0
BLAST of CsaV3_3G031600 vs. TAIR 10
Match: AT2G47115.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 207.6 bits (527), Expect = 1.5e-53 Identity = 116/262 (44.27%), Postives = 150/262 (57.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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