CsaV3_3G031390 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G031390
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr3: 27094609 .. 27094864 (-)
RNA-Seq Expression	CsaV3_3G031390
Synteny	CsaV3_3G031390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGGGCAGAAGGGGGGTTTAGCGGCGGAAATTTAGAAGTGTGATGGAGTTGAGGGGGAGGAGGGATTTGTGAAGGCGAGGCGGTGGAGTGGAGATTATTGAGAGGAAGATTTGTTGAAGGATGCGAGATTTGGGATATGGGATTGGCTGTCGGAGCCGGTGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG

mRNA sequence

ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGGGCAGAAGGGGGGTTTAGCGGCGGAAATTTAGAAGATGCGAGATTTGGGATATGGGATTGGCTGTCGGAGCCGGTGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG

Coding sequence (CDS)

ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGGGCAGAAGGGGGGTTTAGCGGCGGAAATTTAGAAGATGCGAGATTTGGGATATGGGATTGGCTGTCGGAGCCGGTGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG

Protein sequence

MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ*

Homology

[Close]

BLAST of CsaV3_3G031390 vs. NCBI nr
Match: KGN58510.1 (hypothetical protein Csa_001074 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 58
          MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ
Sbjct: 1  MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57

[Close]

BLAST of CsaV3_3G031390 vs. ExPASy TrEMBL
Match: A0A0A0L9B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 58
          MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ
Sbjct: 1  MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57

The following BLAST results are available for this feature:

BLAST of CsaV3_3G031390 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58510.1	3.9e-23	100.00	hypothetical protein Csa_001074 [Cucumis sativus]	[more]

BLAST of CsaV3_3G031390 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G031390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9B8	1.9e-23	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1	[more]

BLAST of CsaV3_3G031390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G031390.1	CsaV3_3G031390.1	mRNA