CsaV3_3G031250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G031250
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 26996057 .. 26996212 (+)
RNA-Seq ExpressionCsaV3_3G031250
SyntenyCsaV3_3G031250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAATGAAGGAGGAATTCAAAGAGATGGTGGTGAAGAGCATAACGTTAAAAAGACAAAGGTGGTGGTGAGGGTTGGGCACGACAAGCACGAGGGTTGTGATGGTGATGGTGGCGGCAACGGCTGTTTGAAGAAGAGAGGAAGAGCAGTGTGA

mRNA sequence

ATGAAAAATGAAGGAGGAATTCAAAGAGATGGTGGTGAAGAGCATAACGTTAAAAAGACAAAGGTGGTGGTGAGGGTTGGGCACGACAAGCACGAGGGTTGTGATGGTGATGGTGGCGGCAACGGCTGTTTGAAGAAGAGAGGAAGAGCAGTGTGA

Coding sequence (CDS)

ATGAAAAATGAAGGAGGAATTCAAAGAGATGGTGGTGAAGAGCATAACGTTAAAAAGACAAAGGTGGTGGTGAGGGTTGGGCACGACAAGCACGAGGGTTGTGATGGTGATGGTGGCGGCAACGGCTGTTTGAAGAAGAGAGGAAGAGCAGTGTGA

Protein sequence

MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV*
Homology
[Close]
BLAST of CsaV3_3G031250 vs. NCBI nr
Match: KGN58494.1 (hypothetical protein Csa_002475 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 52
          MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV
Sbjct: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 51

[Close]
BLAST of CsaV3_3G031250 vs. ExPASy TrEMBL
Match: A0A0A0LC55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651790 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 52
          MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV
Sbjct: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 51

The following BLAST results are available for this feature:
BLAST of CsaV3_3G031250 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58494.13.3e-21100.00hypothetical protein Csa_002475 [Cucumis sativus][more]
BLAST of CsaV3_3G031250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G031250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC551.6e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651790 PE=4 SV=1[more]
BLAST of CsaV3_3G031250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G031250.1CsaV3_3G031250.1mRNA