CsaV3_3G030140 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G030140
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	GRAM domain-containing protein
Location	chr3: 25884946 .. 25887464 (-)
RNA-Seq Expression	CsaV3_3G030140
Synteny	CsaV3_3G030140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTCCCAACAGTGAAACTTAGCTCTAGTGTCACTGATGCGGCCATAGCCAGGCTTCATCAATGGACGAAGTTACTCACTGAAGGTGGCTATAAAAAAGTATTCCAGCAGACGTTTAGCTTCGTTGATGGAGAAAAATACTTGGACTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGACCTGTGAATGGGACTCTTTACATATCCACAAAAAGGGTGGCTTTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCGGCCAGCCACAGTGGATTCTTTACAAGGTATGTTTGGTCTATTATTCTTAAAGATATTTTGTTCTGATGGATCTGAAATATGATTTTAAGTACAAAACTTAGCTGTTTACTGATAAATTGTTCATTGAGTTTGTTTAGGACGGGCTTGATAATCATTTGGTTCTAGGTTCTTAGTTTTTTTAAAATTAAGCATGTAAACACTTCCTCGACTTGTGAAGTTTCTTTGTTAAGTTGTCTACCTCTTAAAAATGTTTTCAAACTCCTTGCCAAGTTTTGAAGACTAAAAAAAATGTACTTTATTTGGTAACCATTTTGTCTTTTGAAATGTACACTTATTTTCTAAAATGGGAGGAAAGAAGCACAAATTTAAAAAACTAAAAGATAAAACCCAATGAACAGGGCCTTGGATATATTGAAGGAAAGACAAAACAGAACGGAAACAAGAGTTCCCATATGTTTGAGAGGTCTTAGACACTTCACGAAAGATTCTACTGACTTAACTCTCTCTGTTAACGACCCCACTCACATATACTTCTGTTATCTAACACGTGGTGAGGGCCCTGCTGCCTTCACTTTCAAAGATACTCTCTATTACAGTTACAGCCCACCAATTCTCTCTCCCTCTAACTTCCATTTGCTTTTCCCGCCTTTTCTTCTTCAAAAACGGGTGATATGTATACGTAATTTCTTGAGTGCAAGGAAACTTTATACTGTTACAATACCTGAGCTTGTTGTTAGTCATAGAAGAAGCATTTAAGAATAATGTGGGGTCCATGAAATTAAACTATACCATTTAGCAATGTCTTCAATATTGAATGAAAGGGGTAAATCCTGTAAATTTTTCCCTCGAACATATTAGTTACTCTACTTTTTTCTCTTAGTCGACAACAAATTGATAAGAGGAAAAAGAAGAGATAGTTATTAACTGGTCGGTAGCCAAGTTATCTATACAACTCTCCGTACTTGCTTTAGTATGATTATGTTTCACGTTGTCTTTTTTGAATTTATAGAATGGTGGAACTACAGTTTGGGAAATAAGTATATGAAGTTGCAACAGTTTATTTTTACCCCAGTTAATCACTATTTTTCACTTGGTTTCTCCTGTGAAATTCGATGTGAAATTTGATATGAAATTGTTCGTTGTGTTTGTATTTCATATTGTGCTAGAAAATAATTGAAGTTCAAATCCATTAGAATAAAATTGATATGAAATTAAGATGAATAGAAGTATCTAGTTTTATATAGTATAGTTCATAATCTCTCAATGGAGTAAAATAGTCCACTCGCATGCACTGTTTGATGAATGAGAGATAGTGTATCAGAGTCTATACTCTTCACTAGGGAAGTACACGAGCCCATAATTTAATACCATTTAATATACTCATTAAATAGCCTAACATAATTGTCATTTATTAGTTACCCACTATGAACTAAGTAATAAACTGGCCAGTGGCCACCACGGAATCTCTAGCAATGGTTGGAGGAACTGGAAATAGAATGCAGGGTCTGATCTTCCTGTAGGATACCATTGATGAATTGTCAGTCCACAGAAACTATAAGCTGTTGTCCAGGATTAAAGAAAATAATAAATGAAACAATTTAAAGATTAAAGAAGAATTTGCAGCTTTATAAAGCTTTTTCTTGGACATCCATCAATTAATTGACCCCCTCCCCCCAATGAAATTTTTGCCTTCAATTAGGCCAAGGAGACTCAATCTTCCTCTGGCACCTCTTGATGATTATGAAAATTACTTTTAGCGAAATTTGTTCTTCTTCCTAGTTCAATTAGTTATCACATGTCTGTGCATATGAAACTCAAGAGAGTCAATCTCCTATCTCCATTTTTGTGTTTCCATGAATTATAGTTTAGTGGCCCAACTTTGATTTTGAAAACTATGTTTGGGTTAACTGGTATTTGAGTAGAATCAATAAGAATAATGATTAGCAAATTGAAACGCGGAGTTTCGTTGAGTTTCTTTGTCCTTGTATTTTTCTTGCTCATGTTTTCAATGATGAATCTTCTGTTAAAGTCTTCAGCTGGATTCTTTTTCATGAGTATCATGAATATGCAGGTGGTGATAGCGGTTGATGAGTTGGGAAAAATCAATGCTTCTTCAAACCCTATGGATCCTTCACAAAAATACATCCAACTAATCGCGGGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACTAATACATTGCAACAATCCCGTGCCTAG

mRNA sequence

ATGCTTTTCCCAACAGTGAAACTTAGCTCTAGTGTCACTGATGCGGCCATAGCCAGGCTTCATCAATGGACGAAGTTACTCACTGAAGGTGGCTATAAAAAAGTATTCCAGCAGACGTTTAGCTTCGTTGATGGAGAAAAATACTTGGACTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGACCTGTGAATGGGACTCTTTACATATCCACAAAAAGGGTGGCTTTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCGGCCAGCCACAGTGGATTCTTTACAAGGTGGTGATAGCGGTTGATGAGTTGGGAAAAATCAATGCTTCTTCAAACCCTATGGATCCTTCACAAAAATACATCCAACTAATCGCGGGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACTAATACATTGCAACAATCCCGTGCCTAG

Coding sequence (CDS)

ATGCTTTTCCCAACAGTGAAACTTAGCTCTAGTGTCACTGATGCGGCCATAGCCAGGCTTCATCAATGGACGAAGTTACTCACTGAAGGTGGCTATAAAAAAGTATTCCAGCAGACGTTTAGCTTCGTTGATGGAGAAAAATACTTGGACTCCTTTGCTTGCTATCTGTCCACTTCCTCTGGACCTGTGAATGGGACTCTTTACATATCCACAAAAAGGGTGGCTTTTTGTAGTGAGTTTCCTCTTTGTTACTATCCATCTCCTGGCGGCCAGCCACAGTGGATTCTTTACAAGGTGGTGATAGCGGTTGATGAGTTGGGAAAAATCAATGCTTCTTCAAACCCTATGGATCCTTCACAAAAATACATCCAACTAATCGCGGGGGACTCTCATGAATTCTGGTTCATGGGATTCATATCATATAACAAGGCTGTCAAGACTTTAACTAATACATTGCAACAATCCCGTGCCTAG

Protein sequence

MLFPTVKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNGTLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQLIAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA*

Homology

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BLAST of CsaV3_3G030140 vs. NCBI nr
Match: KAE8650861.1 (hypothetical protein Csa_001636 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 6.8e-86
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MLFPTVKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSS 60
           MLFPTVKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSS
Sbjct: 1   MLFPTVKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSS 60

Query: 61  GPVNGTLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQ 120
           GPVNGTLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQ
Sbjct: 61  GPVNGTLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQ 120

Query: 121 KYIQLIAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           KYIQLIAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA
Sbjct: 121 KYIQLIAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 157

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BLAST of CsaV3_3G030140 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKLLTEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 93  MKLSSSVTDAAMARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNG 152

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCS FPLCYYPSP GQPQWILYK+VIAVD++ KINASSNPMDPSQKYIQL
Sbjct: 153 TLYISTKRVAFCSAFPLCYYPSP-GQPQWILYKMVIAVDQVEKINASSNPMDPSQKYIQL 212

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKA+KTLTNTLQ+SRA
Sbjct: 213 ITWDSHEFWFMGFISYNKALKTLTNTLQRSRA 243

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BLAST of CsaV3_3G030140 vs. NCBI nr
Match: XP_008460399.1 (PREDICTED: GEM-like protein 2 isoform X3 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKLLTEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 39  MKLSSSVTDAAMARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNG 98

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCS FPLCYYPSP GQPQWILYK+VIAVD++ KINASSNPMDPSQKYIQL
Sbjct: 99  TLYISTKRVAFCSAFPLCYYPSP-GQPQWILYKMVIAVDQVEKINASSNPMDPSQKYIQL 158

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKA+KTLTNTLQ+SRA
Sbjct: 159 ITWDSHEFWFMGFISYNKALKTLTNTLQRSRA 189

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BLAST of CsaV3_3G030140 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKLLTEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 63  MKLSSSVTDAAMARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNG 122

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCS FPLCYYPSP GQPQWILYK+VIAVD++ KINASSNPMDPSQKYIQL
Sbjct: 123 TLYISTKRVAFCSAFPLCYYPSP-GQPQWILYKMVIAVDQVEKINASSNPMDPSQKYIQL 182

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKA+KTLTNTLQ+SRA
Sbjct: 183 ITWDSHEFWFMGFISYNKALKTLTNTLQRSRA 213

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BLAST of CsaV3_3G030140 vs. NCBI nr
Match: XP_038887653.1 (GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 278.1 bits (710), Expect = 4.7e-71
Identity = 134/152 (88.16%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKL+TEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 58  LKLSSSVTDAAMARLHQGTKLVTEGGYKKVFQQTFGFVDGDKYLDFFACYLSTSSGPVNG 117

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCSEFPLCYYPSP G+PQWILYKV+IAVD+LGKINASSN MDPSQKYIQ+
Sbjct: 118 TLYISTKRVAFCSEFPLCYYPSP-GEPQWILYKVMIAVDQLGKINASSNLMDPSQKYIQV 177

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKAVKTLT+ LQ+SRA
Sbjct: 178 ITRDSHEFWFMGFISYNKAVKTLTDALQRSRA 208

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BLAST of CsaV3_3G030140 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-38
Identity = 75/148 (50.68%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +K   SV DAA++R+ Q TK+L EGGY+KVF+QTF  +  EK L ++ACYLSTS+GPV G
Sbjct: 110 LKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLG 169

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            +Y+ST ++AF S+ PL Y    G Q  W  YKVV+  ++L  +N S++ ++ S KYIQ+
Sbjct: 170 VMYLSTHKLAFSSDNPLSY--KEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQV 229

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQ 154
           I+ D+HEFWFMGF++Y  AVK+L   +Q
Sbjct: 230 ISIDNHEFWFMGFVTYESAVKSLQEAVQ 255

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BLAST of CsaV3_3G030140 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-38
Identity = 74/148 (50.00%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           ++ + S  DAA+ R+ Q TK+  EGGY+K+F+QTF     E+ L+SFACYLSTS+GPV G
Sbjct: 147 LRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMG 206

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            LYIS+ ++A+CS+ PL Y    G Q +W  YKVVI + +L  +N S++ ++P++KYIQ+
Sbjct: 207 VLYISSAKLAYCSDNPLSY--KNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQV 266

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQ 154
           I+ D+HEFWFMGF++Y+ AV +L ++LQ
Sbjct: 267 ISVDNHEFWFMGFLNYDGAVTSLQDSLQ 292

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BLAST of CsaV3_3G030140 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-36
Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +K S S++DAA+ARL Q TK++ EGG ++VFQ+ F  +  EK LDSF CY+ST+SGPV G
Sbjct: 78  LKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTG 137

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            +YIS +R+AFCS++ +    S GG      YKVV+  +++  I++S+N + PS++Y+ +
Sbjct: 138 VIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHM 197

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSR 157
           +  D  EFWFMGF+SY  A   L   L  SR
Sbjct: 198 VTRDGFEFWFMGFVSYIDAFNCLNKALLNSR 228

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BLAST of CsaV3_3G030140 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.2e-31
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 0


Query: 15  AAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNGTLYISTKRV 74
           AA+ R+ Q TK+L EGGY+K+F+QTF  V  E+  +SFACYLSTS+GPV G LY+ST ++
Sbjct: 109 AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKL 168

Query: 75  AFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQLIAGDSHEFW 134
           A+CS+  L                VVI + +L  +N S + ++P++KYIQ+I+ D HEFW
Sbjct: 169 AYCSDTSL----------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFW 228

Query: 135 FMGFISYNKAVKTLTNTLQ 154
           FMGF++Y  AV +L +TLQ
Sbjct: 229 FMGFLNYEGAVTSLQDTLQ 231

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BLAST of CsaV3_3G030140 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 61/151 (40.40%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 2   LFPTVKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSG 61
           L+  +K   S+++ A  +++   K +T+GG++ +F+Q F     E    +FACYLST++G
Sbjct: 111 LWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTG 170

Query: 62  PVNGTLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQK 121
           PV GT+Y+S  RVAFCS+ PL Y+ +P GQ  W  Y+VV+ +  +  +N       P +K
Sbjct: 171 PVAGTVYLSNARVAFCSDRPL-YFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEK 230

Query: 122 YIQLIAGDSHEFWFMGFISYNKAVKTLTNTL 153
           YIQL   D H+FWFMGF++Y KA   L  ++
Sbjct: 231 YIQLTTVDGHDFWFMGFVNYEKATHHLLTSV 260

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BLAST of CsaV3_3G030140 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKLLTEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 93  MKLSSSVTDAAMARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNG 152

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCS FPLCYYPSP GQPQWILYK+VIAVD++ KINASSNPMDPSQKYIQL
Sbjct: 153 TLYISTKRVAFCSAFPLCYYPSP-GQPQWILYKMVIAVDQVEKINASSNPMDPSQKYIQL 212

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKA+KTLTNTLQ+SRA
Sbjct: 213 ITWDSHEFWFMGFISYNKALKTLTNTLQRSRA 243

[Close]

BLAST of CsaV3_3G030140 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKLLTEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 39  MKLSSSVTDAAMARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNG 98

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCS FPLCYYPSP GQPQWILYK+VIAVD++ KINASSNPMDPSQKYIQL
Sbjct: 99  TLYISTKRVAFCSAFPLCYYPSP-GQPQWILYKMVIAVDQVEKINASSNPMDPSQKYIQL 158

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKA+KTLTNTLQ+SRA
Sbjct: 159 ITWDSHEFWFMGFISYNKALKTLTNTLQRSRA 189

[Close]

BLAST of CsaV3_3G030140 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +KLSSSVTDAA+ARLHQ TKLLTEGGYKKVFQQTF FVDG+KYLD FACYLSTSSGPVNG
Sbjct: 63  MKLSSSVTDAAMARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNG 122

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCS FPLCYYPSP GQPQWILYK+VIAVD++ KINASSNPMDPSQKYIQL
Sbjct: 123 TLYISTKRVAFCSAFPLCYYPSP-GQPQWILYKMVIAVDQVEKINASSNPMDPSQKYIQL 182

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  DSHEFWFMGFISYNKA+KTLTNTLQ+SRA
Sbjct: 183 ITWDSHEFWFMGFISYNKALKTLTNTLQRSRA 213

[Close]

BLAST of CsaV3_3G030140 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 125/152 (82.24%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           ++LS SVTDAA+ARLHQ TKLLTEGGY+KVFQQTF F+ G+KY+DSFACYLSTSSGPVNG
Sbjct: 57  LRLSPSVTDAAMARLHQGTKLLTEGGYEKVFQQTFGFIHGDKYVDSFACYLSTSSGPVNG 116

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
           TLYISTKRVAFCSEFPLCYYPSP GQ QWI YKVV+AVD+LG IN SSN +DPSQKYIQ+
Sbjct: 117 TLYISTKRVAFCSEFPLCYYPSP-GQQQWIHYKVVVAVDQLGTINTSSNHLDPSQKYIQV 176

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSRA 158
           I  D HEFWFMGFISYNKAVKTLT+  QQSRA
Sbjct: 177 ITRDXHEFWFMGFISYNKAVKTLTDAFQQSRA 207

[Close]

BLAST of CsaV3_3G030140 vs. ExPASy TrEMBL
Match: B9I981 (GRAM domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G109700 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51
Identity = 99/150 (66.00%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 7   KLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNGT 66
           K+S S+TDAA+AR+ Q TK+LTEGG+ KVFQQTF  + GEK+L+++ACY+STS+GPV GT
Sbjct: 64  KVSPSLTDAAMARISQGTKVLTEGGHDKVFQQTFEVLPGEKFLNAYACYISTSTGPVIGT 123

Query: 67  LYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQLI 126
           LYIS+K+VAFCSE P CYY SP GQ QW+ YKVV+  D L  +N SSN M+PS KYIQ++
Sbjct: 124 LYISSKKVAFCSEHPFCYY-SPTGQQQWMYYKVVVQPDRLRAVNPSSNRMNPSDKYIQVV 183

Query: 127 AGDSHEFWFMGFISYNKAVKTLTNTLQQSR 157
             D HEFWFMGFISY+KA+K L  TLQQSR
Sbjct: 184 TTDGHEFWFMGFISYDKALKQLCETLQQSR 212

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BLAST of CsaV3_3G030140 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 75/148 (50.68%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +K   SV DAA++R+ Q TK+L EGGY+KVF+QTF  +  EK L ++ACYLSTS+GPV G
Sbjct: 110 LKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLG 169

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            +Y+ST ++AF S+ PL Y    G Q  W  YKVV+  ++L  +N S++ ++ S KYIQ+
Sbjct: 170 VMYLSTHKLAFSSDNPLSY--KEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQV 229

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQ 154
           I+ D+HEFWFMGF++Y  AVK+L   +Q
Sbjct: 230 ISIDNHEFWFMGFVTYESAVKSLQEAVQ 255

[Close]

BLAST of CsaV3_3G030140 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-39
Identity = 74/148 (50.00%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           ++ + S  DAA+ R+ Q TK+  EGGY+K+F+QTF     E+ L+SFACYLSTS+GPV G
Sbjct: 147 LRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMG 206

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            LYIS+ ++A+CS+ PL Y    G Q +W  YKVVI + +L  +N S++ ++P++KYIQ+
Sbjct: 207 VLYISSAKLAYCSDNPLSY--KNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQV 266

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQ 154
           I+ D+HEFWFMGF++Y+ AV +L ++LQ
Sbjct: 267 ISVDNHEFWFMGFLNYDGAVTSLQDSLQ 292

[Close]

BLAST of CsaV3_3G030140 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein )

HSP 1 Score: 154.5 bits (389), Expect = 7.3e-38
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           VK S S++DAA+ARL Q TK++ EGG ++VFQ+ F  +  EK LDSF CY+ST+SGPV G
Sbjct: 73  VKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTG 132

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            +YIS +R+AFCS++ +    S GG      YKVV+  +++  I++S+N + PS++Y+ +
Sbjct: 133 VIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHM 192

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSR 157
           +  D  EFWFMGF+SY  A   L   L  SR
Sbjct: 193 VTRDGFEFWFMGFVSYIDAFNCLNKALLNSR 223

[Close]

BLAST of CsaV3_3G030140 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 6   VKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSGPVNG 65
           +K S S++DAA+ARL Q TK++ EGG ++VFQ+ F  +  EK LDSF CY+ST+SGPV G
Sbjct: 78  LKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTG 137

Query: 66  TLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQKYIQL 125
            +YIS +R+AFCS++ +    S GG      YKVV+  +++  I++S+N + PS++Y+ +
Sbjct: 138 VIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHM 197

Query: 126 IAGDSHEFWFMGFISYNKAVKTLTNTLQQSR 157
           +  D  EFWFMGF+SY  A   L   L  SR
Sbjct: 198 VTRDGFEFWFMGFVSYIDAFNCLNKALLNSR 228

[Close]

BLAST of CsaV3_3G030140 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 61/151 (40.40%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 2   LFPTVKLSSSVTDAAIARLHQWTKLLTEGGYKKVFQQTFSFVDGEKYLDSFACYLSTSSG 61
           L+  +K   S+++ A  +++   K +T+GG++ +F+Q F     E    +FACYLST++G
Sbjct: 111 LWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTG 170

Query: 62  PVNGTLYISTKRVAFCSEFPLCYYPSPGGQPQWILYKVVIAVDELGKINASSNPMDPSQK 121
           PV GT+Y+S  RVAFCS+ PL Y+ +P GQ  W  Y+VV+ +  +  +N       P +K
Sbjct: 171 PVAGTVYLSNARVAFCSDRPL-YFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEK 230

Query: 122 YIQLIAGDSHEFWFMGFISYNKAVKTLTNTL 153
           YIQL   D H+FWFMGF++Y KA   L  ++
Sbjct: 231 YIQLTTVDGHDFWFMGFVNYEKATHHLLTSV 260

The following BLAST results are available for this feature:

BLAST of CsaV3_3G030140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650861.1	6.8e-86	100.00	hypothetical protein Csa_001636 [Cucumis sativus]	[more]
XP_008460396.1	3.3e-72	89.47	PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTE...	[more]
XP_008460399.1	3.3e-72	89.47	PREDICTED: GEM-like protein 2 isoform X3 [Cucumis melo]	[more]
XP_008460398.1	3.3e-72	89.47	PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]	[more]
XP_038887653.1	4.7e-71	88.16	GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like prote...	[more]

BLAST of CsaV3_3G030140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SE96	2.5e-38	50.68	GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1	[more]
Q8S8F8	3.2e-38	50.00	GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1	[more]
Q9M122	2.3e-36	46.36	GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1	[more]
Q9M063	2.2e-31	48.20	Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV...	[more]
Q9LYV6	1.9e-30	40.40	GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1	[more]

BLAST of CsaV3_3G030140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCH4	1.6e-72	89.47	GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1	[more]
A0A1S3CCV4	1.6e-72	89.47	GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1	[more]
A0A1S3CCD7	1.6e-72	89.47	GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1	[more]
A0A6J1E018	1.3e-66	82.24	GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1	[more]
B9I981	1.5e-51	66.00	GRAM domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G10970...	[more]

BLAST of CsaV3_3G030140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28200.1	1.7e-39	50.68	FH interacting protein 1	[more]
AT2G22475.1	2.3e-39	50.00	GRAM domain family protein	[more]
AT4G01600.2	7.3e-38	47.02	GRAM domain family protein	[more]
AT4G01600.1	1.6e-37	46.36	GRAM domain family protein	[more]
AT5G13200.1	1.3e-31	40.40	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 34..113 e-value: 2.6E-13 score: 60.2
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 34..154 e-value: 4.4E-20 score: 71.7
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 32..154 e-value: 1.7E-19 score: 71.6
None	No IPR available	PANTHER	PTHR31969:SF9	GEM-LIKE PROTEIN 2	coord: 6..155
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 6..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G030140.1	CsaV3_3G030140.1	mRNA