CsaV3_3G027120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G027120
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 23482537 .. 23483377 (-)
RNA-Seq ExpressionCsaV3_3G027120
SyntenyCsaV3_3G027120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGTGTGTGTGTGTGTGTATATAATTAAATAGATTTTTGGAATGAAAATAATTATATTGTGATAATATAATTATTTAAAGAGAGTATATTATTATTGGGGGGAAAGGAGAAAGTTTGATTGGATGGAAATTAGTTGAAGAGAGAGATTATTTATTTGTTGGTAAATAAATAAAGTAAAAAGGAAAAGGAACAAGTAAATAATAATATAGTTAATACTATTATTATTATTAAATAGGACCCCTTAAACAGCGTGCCAAAGAATTCAACCATCTTCTTCCCCACAAACCCTAGGTGTCGTTGTCGCCCACCATCTCTGATCACCGTTGTAACCTCGTCGATTGTTTTGTCACGTCAAGTCGATTGTCATATGTCTCTGCCTGTTCTCCATTTGTGTTTCTTTTGGTTCAGATCTGGCGTTTTCGTTTCGTCTGGTCGTGCCTGTTTAGCCCGTCGTCCCTTCTCTGCTTGTGAGCCACTTTCGTCTCTTCAGTCGTCCATCCTTCTTCGTCTCTCTTTGTCTCAAGTGAAGCTGAGCGTTCATCCACTGTTTTCTTTGATGAAACTCTGTTCGAGCCACCTTAAAAAATAACTTGAGTCATTCCCCTTCGAGAGTCGTGCGTCCCAGCCGATCTGTCTCTTTACTAAGCTAAGTCGATCCTTCCCTTCCAGTCGAATTCTCCTTTAGCCGAGCCATTGCCTTCCTTTTAAGCTAGTTTAGTTGTGCCAACTTTTGATACTTTTTGGTAAAGTTTTGATTGGGTTTTAGTATGCCCATCAACTAAATTAATTTTGGATTATTTTTGTTGGAGGTGTATTTGGCAAATTGTGAAACAATTG

mRNA sequence

ATGTCTCTGCCTGTTCTCCATTTGTGTTTCTTTTGGTTCAGATCTGGCGTTTTCGTTTCGTCTGGTCGTGCCTGTTTAGCCCGTCGTCCCTTCTCTGCTTGTGAGCCACTTTCGTCTCTTCAGTCGTCCATCCTTCTTCGTCTCTCTTTGTCTCAAGTGAAGCTGAGCGTTCATCCACTGTTTTCTTTGATGAAACTCTGTTCGAGCCACCTTAAAAAATAA

Coding sequence (CDS)

ATGTCTCTGCCTGTTCTCCATTTGTGTTTCTTTTGGTTCAGATCTGGCGTTTTCGTTTCGTCTGGTCGTGCCTGTTTAGCCCGTCGTCCCTTCTCTGCTTGTGAGCCACTTTCGTCTCTTCAGTCGTCCATCCTTCTTCGTCTCTCTTTGTCTCAAGTGAAGCTGAGCGTTCATCCACTGTTTTCTTTGATGAAACTCTGTTCGAGCCACCTTAAAAAATAA

Protein sequence

MSLPVLHLCFFWFRSGVFVSSGRACLARRPFSACEPLSSLQSSILLRLSLSQVKLSVHPLFSLMKLCSSHLKK*
Homology
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BLAST of CsaV3_3G027120 vs. NCBI nr
Match: KAE8650778.1 (hypothetical protein Csa_017595 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.0e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MSLPVLHLCFFWFRSGVFVSSGRACLARRPFSACEPLSSLQSSILLRLSLSQVKLSVHPL 60
          MSLPVLHLCFFWFRSGVFVSSGRACLARRPFSACEPLSSLQSSILLRLSLSQVKLSVHPL
Sbjct: 1  MSLPVLHLCFFWFRSGVFVSSGRACLARRPFSACEPLSSLQSSILLRLSLSQVKLSVHPL 60

Query: 61 FSLMKLCSSHLKK 74
          FSLMKLCSSHLKK
Sbjct: 61 FSLMKLCSSHLKK 73

The following BLAST results are available for this feature:
BLAST of CsaV3_3G027120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650778.15.0e-31100.00hypothetical protein Csa_017595 [Cucumis sativus][more]
BLAST of CsaV3_3G027120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027120.1CsaV3_3G027120.1mRNA