CsaV3_3G026350 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G026350
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 22467502 .. 22468009 (+)
RNA-Seq ExpressionCsaV3_3G026350
SyntenyCsaV3_3G026350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATTAAGGACGTATCATAAGCAATTTGATGATGTTGCTAGCATTGAAGATCAATTTTACAATAAAAATAAATAAATTATTGATCCATGCTTCTCATACTATGTGATGGTGAACTTGAGATACTCAGAGGGAGGAAAATAAGCCGCCAATACGCATTTCTCGTCGCATCTCCGACGGAGAATCTTGCACGCCACATACAAACTGACCACCAACGGATGCCTGAACGGTCGGCAACGGTAAATGAGATGCAATGGCGACTAAGAAAGGAGAAGAGTTGAAGTCAGGCTGCATTTTGTCTTAGTAGAAGAGAAAGTGAGGGAGAAGGAGAAAGTGAGGAGGGAGAAGGAGAAAGTAAATGAGATGCAATGGCGACTAAGAAAGGAGAAGAGTTGAAGTCAGGCTGCATTTTGTCTTAGTAGAAGAGAAAGTGAGGGAGAAGGAGAAAGTGAGGAGGGAGAAGGAGAAAGGCGCACGAAGAGTACATGAGGGAGAAGGAAAAGGAGAAAAT

mRNA sequence

ATGCTTCTCATACTATGTGATGGTGAACTTGAGATACTCAGAGGGAGGAAAATAAGCCGCCAATACGCATTTCTCGTCGCATCTCCGACGGAGAATCTTGCACGCCACATACAAACTGACCACCAACGGATGCCTGAACGGTCGGCAACGGTAAATGAGATGCAATGGCGACTAAGAAAGGAGAAGAGTTGA

Coding sequence (CDS)

ATGCTTCTCATACTATGTGATGGTGAACTTGAGATACTCAGAGGGAGGAAAATAAGCCGCCAATACGCATTTCTCGTCGCATCTCCGACGGAGAATCTTGCACGCCACATACAAACTGACCACCAACGGATGCCTGAACGGTCGGCAACGGTAAATGAGATGCAATGGCGACTAAGAAAGGAGAAGAGTTGA

Protein sequence

MLLILCDGELEILRGRKISRQYAFLVASPTENLARHIQTDHQRMPERSATVNEMQWRLRKEKS*
Homology
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BLAST of CsaV3_3G026350 vs. NCBI nr
Match: KAE8650747.1 (hypothetical protein Csa_017494 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MLLILCDGELEILRGRKISRQYAFLVASPTENLARHIQTDHQRMPERSATVNEMQWRLRK 60
          MLLILCDGELEILRGRKISRQYAFLVASPTENLARHIQTDHQRMPERSATVNEMQWRLRK
Sbjct: 1  MLLILCDGELEILRGRKISRQYAFLVASPTENLARHIQTDHQRMPERSATVNEMQWRLRK 60

Query: 61 EKS 64
          EKS
Sbjct: 61 EKS 63

The following BLAST results are available for this feature:
BLAST of CsaV3_3G026350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650747.15.4e-26100.00hypothetical protein Csa_017494 [Cucumis sativus][more]
BLAST of CsaV3_3G026350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G026350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G026350 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G026350.1CsaV3_3G026350.1mRNA