CsaV3_3G026290 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G026290
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 22402848 .. 22403102 (+)
RNA-Seq ExpressionCsaV3_3G026290
SyntenyCsaV3_3G026290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACTCAGACTAACACGGCTTGGACGCGTAGCTCACAAAAAGAAGATCGACTCGGCTTGCGTCCTTGATCGTCAAGTGCGACGATGGCTAGCGACACTGTGCGAATGGAGACCACGATCGGTGACGGTTTCGACGGAGGAGGGGGCTACGGGCGACGACGATTTTGATGAAGGAGGGGACGACCGATTTCAAGTGATTTTGAAGACAAGAAGAGATGCTCAACTCAGCAATCAACGAGAAGATTTCGACTAA

mRNA sequence

ATGCAACTCAGACTAACACGGCTTGGACGCGTAGCTCACAAAAAGAAGATCGACTCGGCTTGCGTCCTTGATCGTCAAGTGCGACGATGGCTAGCGACACTGTGCGAATGGAGACCACGATCGGTGACGGTTTCGACGGAGGAGGGGGCTACGGGCGACGACGATTTTGATGAAGGAGGGGACGACCGATTTCAAGTGATTTTGAAGACAAGAAGAGATGCTCAACTCAGCAATCAACGAGAAGATTTCGACTAA

Coding sequence (CDS)

ATGCAACTCAGACTAACACGGCTTGGACGCGTAGCTCACAAAAAGAAGATCGACTCGGCTTGCGTCCTTGATCGTCAAGTGCGACGATGGCTAGCGACACTGTGCGAATGGAGACCACGATCGGTGACGGTTTCGACGGAGGAGGGGGCTACGGGCGACGACGATTTTGATGAAGGAGGGGACGACCGATTTCAAGTGATTTTGAAGACAAGAAGAGATGCTCAACTCAGCAATCAACGAGAAGATTTCGACTAA

Protein sequence

MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGGDDRFQVILKTRRDAQLSNQREDFD*
Homology
[Close]
BLAST of CsaV3_3G026290 vs. NCBI nr
Match: KGN58113.1 (hypothetical protein Csa_017550 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 6.7e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGG 60
          MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGG
Sbjct: 1  MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGG 60

Query: 61 DDRFQVILKTRRDAQLSNQREDFD 85
          DDRFQVILKTRRDAQLSNQREDFD
Sbjct: 61 DDRFQVILKTRRDAQLSNQREDFD 84

[Close]
BLAST of CsaV3_3G026290 vs. ExPASy TrEMBL
Match: A0A0A0L8I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516520 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGG 60
          MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGG
Sbjct: 1  MQLRLTRLGRVAHKKKIDSACVLDRQVRRWLATLCEWRPRSVTVSTEEGATGDDDFDEGG 60

Query: 61 DDRFQVILKTRRDAQLSNQREDFD 85
          DDRFQVILKTRRDAQLSNQREDFD
Sbjct: 61 DDRFQVILKTRRDAQLSNQREDFD 84

The following BLAST results are available for this feature:
BLAST of CsaV3_3G026290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58113.16.7e-40100.00hypothetical protein Csa_017550 [Cucumis sativus][more]
BLAST of CsaV3_3G026290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G026290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8I33.3e-40100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516520 PE=4 SV=1[more]
BLAST of CsaV3_3G026290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G026290.1CsaV3_3G026290.1mRNA