CsaV3_3G024990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G024990
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionWD repeat-containing protein 91-like protein
Locationchr3: 21950355 .. 21951057 (-)
RNA-Seq ExpressionCsaV3_3G024990
SyntenyCsaV3_3G024990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTCATCCTGTATTTTTCTTCTTCATGACAACAATAATGGAACTTGAAGAGTTGGAGAAGAGAATGGAAGAACTGAAAGCTATGAGCGAGAAGCAAGAAGCCACAGCAAATTACTACGACACCAAGTTGCACACTATAATTGCCGCCTATTTCATTTGGGAACGCGCTTTCTGCTTCGCCATCTCCAACAAAACTAATTCTCCTAATTATTTCTCCTCCCTCATCTGCCATGCCAACTGGCGCCTCATTCTTGCTCTAAGCTCTTTGTACAGCCTTGTTTACATTCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCAGAACTAAAGCAAAATTTGATTCTCAACAAACATGCTCAACTTTATCATCAAATTTCGAAAATCAAACAAGAATTTAACTCCATTGATTCTTCATCCATGGAGGCTGAAGAGGATTTAATACTCTTGATAAACTCAAGTTCAACCTTTAGGAGGAGTGAGGAGAGAATATTTTATATGTCCACCATTTTCTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTCTATTCTTTGTTCATAATTAAGTTGCACTGGTCTTTTTGCAGTTCATATAATAGTTTTATTTAAGTATTAAGGTTTGTTAAGAGTTGGAGGTGTGGCACCTTAGGATGTAACAAATGTTTCCTTTAATTTTATATAATATGTG

mRNA sequence

ATGACAACAATAATGGAACTTGAAGAGTTGGAGAAGAGAATGGAAGAACTGAAAGCTATGAGCGAGAAGCAAGAAGCCACAGCAAATTACTACGACACCAAGTTGCACACTATAATTGCCGCCTATTTCATTTGGGAACGCGCTTTCTGCTTCGCCATCTCCAACAAAACTAATTCTCCTAATTATTTCTCCTCCCTCATCTGCCATGCCAACTGGCGCCTCATTCTTGCTCTAAGCTCTTTGTACAGCCTTGTTTACATTCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCAGAACTAAAGCAAAATTTGATTCTCAACAAACATGCTCAACTTTATCATCAAATTTCGAAAATCAAACAAGAATTTAACTCCATTGATTCTTCATCCATGGAGGCTGAAGAGGATTTAATACTCTTGATAAACTCAAGTTCAACCTTTAGGAGGAGTGAGGAGAGAATATTTTATATGTCCACCATTTTCTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTCTATTCTTTGTTCATAA

Coding sequence (CDS)

ATGACAACAATAATGGAACTTGAAGAGTTGGAGAAGAGAATGGAAGAACTGAAAGCTATGAGCGAGAAGCAAGAAGCCACAGCAAATTACTACGACACCAAGTTGCACACTATAATTGCCGCCTATTTCATTTGGGAACGCGCTTTCTGCTTCGCCATCTCCAACAAAACTAATTCTCCTAATTATTTCTCCTCCCTCATCTGCCATGCCAACTGGCGCCTCATTCTTGCTCTAAGCTCTTTGTACAGCCTTGTTTACATTCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCAGAACTAAAGCAAAATTTGATTCTCAACAAACATGCTCAACTTTATCATCAAATTTCGAAAATCAAACAAGAATTTAACTCCATTGATTCTTCATCCATGGAGGCTGAAGAGGATTTAATACTCTTGATAAACTCAAGTTCAACCTTTAGGAGGAGTGAGGAGAGAATATTTTATATGTCCACCATTTTCTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTCTATTCTTTGTTCATAA

Protein sequence

MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEFNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS*
Homology
BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KAE8650729.1 (hypothetical protein Csa_023412 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0

Query: 1   MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSP 60
           MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSP
Sbjct: 1   MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSP 60

Query: 61  NYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISK 120
           NYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISK
Sbjct: 61  NYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISK 120

Query: 121 IKQEFNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSI 180
           IKQEFNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSI
Sbjct: 121 IKQEFNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSI 180

Query: 181 LCS 184
           LCS
Sbjct: 181 LCS 183

BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.0 bits (432), Expect = 9.5e-39
Identity = 105/189 (55.56%), Postives = 130/189 (68.78%), Query Frame = 0

Query: 5   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 64
           ME+EEL+K MEE++ M EK EA  NYYDTKLHTII AYF+WER F F IS KT  P+  S
Sbjct: 1   MEVEELKKMMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKT-FPSTIS 60

Query: 65  SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 124
           +L C+ NW +ILALS   S VY+LL+ DAALMLYR E + +LIL KHAQL   +  IK+E
Sbjct: 61  TLSCNGNWWVILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEE 120

Query: 125 FNSIDSSSMEAE---------EDLILLINSSSTFRRSE--ERIFYMSTIFCALVCVASLE 183
                +S MEA          E+ ++LINS+S FRR    ER  ++ TIFCA + VASLE
Sbjct: 121 QADTKASLMEAGDQASHGLSLEEELMLINSTSPFRRRRPWERKVHVYTIFCAFIGVASLE 180

BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-38
Identity = 106/193 (54.92%), Postives = 129/193 (66.84%), Query Frame = 0

Query: 1   MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSP 60
           MT +   EEL+K MEE++ M E  EA  NYYDTKLH II AYF+WER F F IS KT  P
Sbjct: 1   MTKMEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPP 60

Query: 61  NYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISK 120
              S+L C+ NW +ILALSS  S VY+LL+ D ALMLYR E + +LIL KHAQL   +  
Sbjct: 61  T-ISTLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLA 120

Query: 121 IKQEFNSIDSSSMEAE---------EDLILLINSSSTFRRSE--ERIFYMSTIFCALVCV 180
           IK+E   I +S MEA          E+ ++LINS+S FRR    ER  Y+ TIFCAL+ V
Sbjct: 121 IKEEQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGV 180

Query: 181 ASLELYACKSILC 183
           ASLELYACK++LC
Sbjct: 181 ASLELYACKAVLC 192

BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KAG6579344.1 (hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.7 bits (387), Expect = 1.6e-33
Identity = 98/188 (52.13%), Postives = 125/188 (66.49%), Query Frame = 0

Query: 5   MELEE-LEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERA-----FCFAISNKTN 64
           ME+EE +EKRMEE+K M EK E   NYYDTKLH II AY +WER      F F +SN TN
Sbjct: 1   MEIEEQMEKRMEEVKGMWEKVEGRVNYYDTKLHAIIVAYLVWERVFFFFFFFFGVSN-TN 60

Query: 65  SPNYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQI 124
             +  S+L C+  W +I+ALS L S VY+LL++DAALMLY  + + NLIL  H QLY Q+
Sbjct: 61  FASNISTLSCNGKWWVIVALSCLCSFVYMLLFVDAALMLYPHQNQLNLILQTHHQLYRQL 120

Query: 125 SKIK---QEFNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELY 184
             IK    E     S  +  EE+L+L+ ++++  RR   R FY+ TIFCAL+ VASLELY
Sbjct: 121 LAIKDSLMEAGDEASHGLSLEEELMLINSNAAYRRRPWGRKFYVYTIFCALIDVASLELY 180

BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KGN51471.1 (hypothetical protein Csa_009166 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 0

Query: 7   LEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSL 66
           +EE++K +EEL AM++ Q+     Y+T L  I  A+ +W R F F++S    SPN  SSL
Sbjct: 6   IEEMQKVLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQ--TSPN--SSL 65

Query: 67  ICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEFN 126
           +   +W L+ AL+   + +YILL++  +LML R+E + ++I  +  QL+ QI  ++ +  
Sbjct: 66  LHCKHWWLLFALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQ-- 125

Query: 127 SIDSSSMEAEEDLIL--LINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS 184
                  +  E +I+  +IN       + ER  Y++ I C  + + +LELYA +S+LC+
Sbjct: 126 ----ELPQMIEPIIMDHIINGEMGRTSTFERKLYINCILCGFIGIVALELYASRSLLCN 174

BLAST of CsaV3_3G024990 vs. ExPASy TrEMBL
Match: A0A0A0L822 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query: 5   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 64
           MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS
Sbjct: 1   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 60

Query: 65  SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 124
           SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE
Sbjct: 61  SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 120

Query: 125 FNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS 184
           FNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS
Sbjct: 121 FNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS 179

BLAST of CsaV3_3G024990 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.4e-13
Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 0

Query: 5   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 64
           M L ELE++ EELK ++EKQE+   YY+TK+  I+  Y I+ R F F IS  ++S N   
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFN--- 60

Query: 65  SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 124
              C  +W +ILALS L S +Y LL+LDA  ML+R++ + ++I  +  +L+ QI   K +
Sbjct: 61  ---C-KDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQ 120

Query: 125 FNSIDSSSMEAEE----------DLILLINSSSTFRRSEERIFYMSTIFCALVCVASLEL 184
            +     SME  E          + +L+++    FR    +++   T+  AL+ V ++EL
Sbjct: 121 DDV--GLSMETGESSGGFEFGFHEKMLMLDH---FRIVGRKVYIYFTV-SALLAVTAIEL 176

BLAST of CsaV3_3G024990 vs. ExPASy TrEMBL
Match: A0A0A0KUT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.4e-13
Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 0

Query: 7   LEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSL 66
           +EE++K +EEL AM++ Q+     Y+T L  I  A+ +W R F F++S    SPN  SSL
Sbjct: 6   IEEMQKVLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQ--TSPN--SSL 65

Query: 67  ICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEFN 126
           +   +W L+ AL+   + +YILL++  +LML R+E + ++I  +  QL+ QI  ++ +  
Sbjct: 66  LHCKHWWLLFALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQ-- 125

Query: 127 SIDSSSMEAEEDLIL--LINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS 184
                  +  E +I+  +IN       + ER  Y++ I C  + + +LELYA +S+LC+
Sbjct: 126 ----ELPQMIEPIIMDHIINGEMGRTSTFERKLYINCILCGFIGIVALELYASRSLLCN 174

BLAST of CsaV3_3G024990 vs. ExPASy TrEMBL
Match: A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12
Identity = 64/183 (34.97%), Postives = 104/183 (56.83%), Query Frame = 0

Query: 5   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 64
           M+L  L++  EELK ++EKQE    +Y+++   I   Y IWER F FA+S +T+SP    
Sbjct: 1   MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALS-QTSSP---- 60

Query: 65  SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 124
            L C  +WR++L LS + S VY LL+L+A  MLYR++ + ++I  + + +  QI     +
Sbjct: 61  -LKC-IDWRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQ 120

Query: 125 FNSIDSSSMEAEE-----------DLILLINSSSTFRRSEERIFYMSTIFCALVCVASLE 177
            +    S+MEA +            +   +N   +FR  ++++ Y+S I  +LV V +LE
Sbjct: 121 DDG--GSAMEAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKV-YISAIISSLVAVTALE 173

BLAST of CsaV3_3G024990 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 0

Query: 5   MELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFS 64
           ME  EL++  E LK + EKQE+   Y++++   I  AY IW R F FAIS  +      S
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTS------S 60

Query: 65  SLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQE 124
           SL+   +W ++L LS   + VY L +L+A  MLYR + + ++I  + A++  QI   + +
Sbjct: 61  SLLKCIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQ 120

Query: 125 FNSIDSSSMEAEEDLILLINSSSTFR-------------RSEERIFYMSTIFCALVCVAS 183
            + +D  +MEA +       SS  F+             R  ER FY+     AL+ V +
Sbjct: 121 LDDVD-LAMEAGD-------SSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTA 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8650729.11.8e-90100.00hypothetical protein Csa_023412 [Cucumis sativus][more]
KAG6579352.19.5e-3955.56hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579345.12.1e-3854.92hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579344.11.6e-3352.13hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN51471.11.5e-1233.52hypothetical protein Csa_009166 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L8221.4e-88100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1[more]
A0A6J1DSQ07.4e-1335.45uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KUT07.4e-1333.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1[more]
A0A6J1DTV62.8e-1234.97uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DS872.8e-1233.51uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..27
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 5..183
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 5..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G024990.1CsaV3_3G024990.1mRNA