CsaV3_3G023690 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G023690
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 21476180 .. 21476333 (-)
RNA-Seq ExpressionCsaV3_3G023690
SyntenyCsaV3_3G023690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACGTCATGCGAGAACTTGATCCAAGACGTCGTGCGAGATATGAAATCGTTGTGGGTTTGCTTTAGAGGCGTCGTCGGAGAACTGGAACGAAATCGTTTGTTGGAGATCTGGAACAGAGGCAGTCATCGAACGTCAAAGACTGACGACG

mRNA sequence

ATGGAGACGTCATGCGAGAACTTGATCCAAGACGTCGTGCGAGATATGAAATCGTTGTGGGTTTGCTTTAGAGGCGTCGTCGGAGAACTGGAACGAAATCGTTTGTTGGAGATCTGGAACAGAGGCAGTCATCGAACGTCAAAGACTGACGACG

Coding sequence (CDS)

ATGGAGACGTCATGCGAGAACTTGATCCAAGACGTCGTGCGAGATATGAAATCGTTGTGGGTTTGCTTTAGAGGCGTCGTCGGAGAACTGGAACGAAATCGTTTGTTGGAGATCTGGAACAGAGGCAGTCATCGAACGTCAAAGACTGACGACG

Protein sequence

METSCENLIQDVVRDMKSLWVCFRGVVGELERNRLLEIWNRGSHRTSKTDDX
Homology
[Close]
BLAST of CsaV3_3G023690 vs. NCBI nr
Match: KAE8650719.1 (hypothetical protein Csa_010631, partial [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  METSCENLIQDVVRDMKSLWVCFRGVVGELERNRLLEIWNRGSHRTSKTDD 52
          METSCENLIQDVVRDMKSLWVCFRGVVGELERNRLLEIWNRGSHRTSKTDD
Sbjct: 1  METSCENLIQDVVRDMKSLWVCFRGVVGELERNRLLEIWNRGSHRTSKTDD 51

[Close]
BLAST of CsaV3_3G023690 vs. ExPASy TrEMBL
Match: A0A0A0L7Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G455630 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 25 GVVGELERNRLLEIWNRGSHRTSKTDD 52
          GVVGELERNRLLEIWNRGSHRTSKTDD
Sbjct: 43 GVVGELERNRLLEIWNRGSHRTSKTDD 69

The following BLAST results are available for this feature:
BLAST of CsaV3_3G023690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650719.14.3e-21100.00hypothetical protein Csa_010631, partial [Cucumis sativus][more]
BLAST of CsaV3_3G023690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G023690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z84.2e-06100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G455630 PE=4 SV=1[more]
BLAST of CsaV3_3G023690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G023690.1CsaV3_3G023690.1mRNA