CsaV3_3G023640 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G023640
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 21439673 .. 21440102 (-)
RNA-Seq ExpressionCsaV3_3G023640
SyntenyCsaV3_3G023640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCTTGCAGAGGATGGCTTGGAGATGAAGTTCTCAACTATTTGCAGCCTGAGGGAACATGTCGTCGATGACATGATGGTTGGTCAATCTCGTCAGTCCAACGACACTAGGTCGGGCTCTAGCAGTCAGAAAAGGAAGTGTGACATGTAGTAGTTCGAGACTTACGACCTGATTCGAGATTGCATGGACAATGCAATTGATCAGCTTAAGACCATTGCAGATGACCTGATAAAGCGATCAACCGGGAGCATGTGTGGTGCAGGAGGTCATTACGCATATGAAGTCCATTTCGGGCCTTACTATGGAGGACATCAGTAAATAAGTGATGATAGTGATGGAGAAGGTGTCGTTAGTGAGAAGCTTCATCAAAATGCCTGATTTGATCAAGGTTGCCTACTGCAGAGTCCTCCTCTGCGATAACCCATGA

mRNA sequence

ATGGTCCTTGCAGAGGATGGCTTGGAGATGAAGTTCTCAACTATTTGCAGCCTGAGGGAACATGTCGTCGATGACATGATGTTCGAGACTTACGACCTGATTCGAGATTGCATGGACAATGCAATTGATCAGCTTAAGACCATTGCAGATGACCTGATAAAGCGATCAACCGGGAGCATGTGTGGTGCAGGAGGTCATTACGCATATGAAGTCCATTTCGGGCCTTACTATGGAGGACATCAAGTCCTCCTCTGCGATAACCCATGA

Coding sequence (CDS)

ATGGTCCTTGCAGAGGATGGCTTGGAGATGAAGTTCTCAACTATTTGCAGCCTGAGGGAACATGTCGTCGATGACATGATGTTCGAGACTTACGACCTGATTCGAGATTGCATGGACAATGCAATTGATCAGCTTAAGACCATTGCAGATGACCTGATAAAGCGATCAACCGGGAGCATGTGTGGTGCAGGAGGTCATTACGCATATGAAGTCCATTTCGGGCCTTACTATGGAGGACATCAAGTCCTCCTCTGCGATAACCCATGA

Protein sequence

MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSMCGAGGHYAYEVHFGPYYGGHQVLLCDNP*
Homology
[Close]
BLAST of CsaV3_3G023640 vs. NCBI nr
Match: KGN58036.1 (hypothetical protein Csa_011319 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 1.6e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSM 60
          MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSM
Sbjct: 1  MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSM 60

Query: 61 CGAGGHYAYEVHFGPYYGGHQVLLCDNP 89
          CGAGGHYAYEVHFGPYYGGHQVLLCDNP
Sbjct: 61 CGAGGHYAYEVHFGPYYGGHQVLLCDNP 88

[Close]
BLAST of CsaV3_3G023640 vs. ExPASy TrEMBL
Match: A0A0A0LDB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G449120 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.9e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSM 60
          MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSM
Sbjct: 1  MVLAEDGLEMKFSTICSLREHVVDDMMFETYDLIRDCMDNAIDQLKTIADDLIKRSTGSM 60

Query: 61 CGAGGHYAYEVHFGPYYGGHQVLLCDNP 89
          CGAGGHYAYEVHFGPYYGGHQVLLCDNP
Sbjct: 61 CGAGGHYAYEVHFGPYYGGHQVLLCDNP 88

The following BLAST results are available for this feature:
BLAST of CsaV3_3G023640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58036.11.6e-44100.00hypothetical protein Csa_011319 [Cucumis sativus][more]
BLAST of CsaV3_3G023640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G023640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDB27.9e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G449120 PE=4 SV=1[more]
BLAST of CsaV3_3G023640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G023640.1CsaV3_3G023640.1mRNA