CsaV3_3G022220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G022220
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionrho-N domain-containing protein 1, chloroplastic-like
Locationchr3: 19492641 .. 19496893 (-)
RNA-Seq ExpressionCsaV3_3G022220
SyntenyCsaV3_3G022220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCGCCCGAGGAAGCTATGGCATTAAACCAATATCTTCTTCCATTATCAATGATAAATTCACAATTACAGGCCAGCAGGACAAAGAAGAACGAACCGGAAAAGCGAAATTCTTCAAAGAAATGCAAATAAAAAACCCTTCCTTTCCTCACTAAAACCTTTCCTTCCTTCCAGGTGTCTTAACCAGCAATGTCTCAAGCCATTCACCTTCTTCCTCACAACCCTACAGGTATCTGTTCTTCATATCCACAAAATCTCTGTTGGGTGCTCTTTATTTTTGTTCTTTGCTTGCTTAAAGGCTGGGAAATTAAGTACACTATTATTTTTACATTTACTGGGTGTTTCTAATTTCCATATAATTTCATGTGTTTTGTCCTAACGATCAAATGTTTGCATTAAGGTCTCTAAAGTTCTCGAATTTTGAATTTCTATAGGTTTTAGCGCCTCTTGGTTTTATCTGTGTTTTGTTGTTTACTTTTCTATTTGGTTGAATCTGTTTGTGGAGAAATTAAAGCTTTGCACTGGTTGGATTTCGTTCGACTTTTTGTGTTGAGCTTGTTCTGTTTCTCTCTATTTTCCCTTTTCTAAGTTTAGGTTTGATTTTAGAGTACTTAATACCATTTTCTGATTGTTTGAAAATTCTCTACTTGGTTGGATTACATGACCCTTTGGTTTCCTTTGCTGTATCATATTCTGGCCTTCTCGAATTGATGTAGATGTATGAGTTTTCTTTTCCTCAGTTTTTGGAGGAAGGTCAAGATGTAATGGTTACATCTGATATTGGGATATTCTCACTGCTTGCTTGAAGTTGGGGGTATTTGCATCGTCACTTTGCAGTATTTGCATTTGTTGAATCTTATCTCTTTGCTGTATGTTCTGTTCTGATATTGACTTTTCCAGTTTTCACATCCAATGTTTTAAAAGGTTATTGAGGTTTACGTCTTGAGGGTCGCCTCAGGGCAAGACTCTAACTTTTAGCTGTGAGAATTGTGGCTTCTTTGAACCACAAGAGGTTTATGCCATTTTGTTATAATGCATCAAGGCTTAAAAGTATCTATGACCCATATAACGATTAGAATAATAATATTAATTTGCCTCATTCTTCAAAATTATAAAACTTCGTGTTCTGAAAATAGGAACTATTACTACTTTTTCTACCGTGACTTTCAAAGTAATTATAATATTAGTCAATCCTTTAAATGATAATAGTAGAGAAGTTAAAGATATCTCTTTTAGATTTTTTTTGTTCAAGCGGCAGTTAATAGGGGTGGTTTTTTATTTTTTATTTTATTTATTTTTCTCTTTTATGATCATTATGTTTAGCAACACCTGGTCAAACTAACTTAGGAGTTATTAAATGTCTTTAGTTAAATTCGAAGCTTACGCCTTATGCTGGTTTAAGCCTGTGTTGTGCCTTTATGAGGAAAAGCCACAAGGGCGCTTTTTTCCTTTGTTAATTTCCATATTATTTTGCACATATGAAGATTGTTTAAACTGTTTTGATTTAAGGGCTTTGCTATAACTTCATCTTGAATTATTTTGGAGTGTTGTTTCCATAATTCAACGACGTGCCTCCATCTATTTCGGGAAGAGATTGACGATTGTACGTTGTCACATTTATAGGATTTATTTTGATTTTTATTTATTGTTGATCACTGTTGATGCATTATTGATGTTCAATAGTAACAGATAACGAGTCTGGAATTACATGTCTTGGTTGTAAAAACATTAGGCTGTTCATATATGCTCAAATCATGAAACTTAAAGCCTATGACTTGACCGCTAAGTTGTTTTCTCGATGCCCTTTACCTACAGCAACTGGTCCTAGTTGTTGCTTCTCCATTTTTCAATGAATAACCACACTATTATTGGTTGTTTTGATATACTTAATGGAAGCTTCTTTGTCATTTCTACATTTCTTCTTTTTCTCTTTTCAAGCAATGCCTTTTCTTTATTTGAATGGGACTTCAATGGACTTCAATTGCATATTTCTAATTTTGTGATTGTTTTCTTTTCAATGAATAACCACACTTACCTAAAAGAAATGCCTCAAGCCAAGCAAAATAAAACTTAGGGAATGTTTGCATAAAGGTTCCGTAATCTGAAGCCAACAAATTGAAATGTAATCTAGCAAGAGACCAAACATTAGAAGAACTAATTGCGTAGTTCTAATTTTGTGGTTTATACCTTATAGCATGATGGATGACAACTGTTGCTGTGTTTATGATTGCTTACTATGTGTTTATGATTGCTTACTATTAATGTATGGCATAACACTTTGGACTAATAGGTGGAAAATTCGAGGTTGGTGAATTTTTTTTTTTTTATTTGTTCTTTCTGAAGGTATACTTCTTTTTCTCTTTCGAAGGCAACATCTTTTCTTGCTGCAGATGGCTTTCCTAGATTGGAGATTTTAAATAAATGGTTAAAAAGAAAGACTTGGGAATAAACCTGCTCTGTTTTTGCAACGTTCAGGGGATTTCAATATATTTATGGAATGGGAATCATACCCCATTTTTTACTTCGATACTTCTCCCTTATAAATTCTGTTCTTGTTTGCTTTATATAACTTGGGTTACTACTCGTGCTCGAAATCTTATTAGTTCTTATAAACATGGAATCTGGATTTGATATAGGCTTTGGACTGTCAGATAGCAGATGCATACCTTGCTCTGGAGTTTCAGGACGAGCAGCCTCGTTCTCTTTTCACTCTTTATGTGCTGAACATAGAATCAATGTACCAGTCAAATTTAGACCTCTAAACTGTACTTCGTTGGGGGAGTCTTTTACGTGCAAAGCCAGCTCAGGAGGTCACAGGAGAAACCCAGATTTTCCAAAGCAAAATAGGCATGGCTTCTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGACAATGTTGATGAATCTGATTTATTATTGTCTAAGAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCCCAGGCCACCGCTACCCCAGGACCAAGGGAAAAGGAAATTGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCAGCAATGAAAGAAGAGAAGAAAGTGGAAGCTCAAGGACAAACGAAAGGGAGTGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATTCCGTGGAACAAGGGAAGAGAAGCAGTGGTGGGGGTGGCAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTACGATGAAGGAAGAGGCTCAAGCTTTTTTGGACTAAGTCCCAATTTGAGGGAGAAGGCCCAAAGACCCGTATCAAATTTCCAACGTAGATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCAACTCGACCAATGGTATGAATTCAAAAGGTGTGAAACCTAATGGAACTGATACAGGTTCTCAACTGAAAGGAAAGGTATGGACTCGGCAAGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGGGAGGCAGAACAGGAGCCAGAGCCGGACCAAGAGTTCGAATTGGAACCAGAGGCTGAAACATATGATCTAGAGCATGAAGGTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGTGTGTCATCAGACGTCGATGACACGTTTGAGGATGATGTTAAAGACAATGAGGAATTTGCAAAGCATGGTGAACAAGAACATGAGGACTTGAACTCATTGAAACTTGCTGAACTGAGGGCGATTGCCAAATCTCGTAGTTTGAGAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACGGTCAGTAAGGATGTCATACTGGACAGGAACCTCTGGATTTAGGTTGTTTAGGTGTTTTTTTGTACTTATTTTTGTTGTGCTTATCAATCTGTTTGACTAGTTTTGAGTTAGAAATTGGTATTAGCTTTTTACAAACTCTTTCCCAGATTGTATATCAGGCTAATCTTCGCAGGTTCAGAGTACAAGTCAACAACAATCTCTTCTTTTAGTTTTTTCTCTTCTATTCAGACTCTTGTTCACTTATAGGAACCATTTTTTAAAGGGATTTTTATTGCTAACATGGTCCTCAAGCGTTTCCATCATGTTGCTCAGTGGGTGGGATTGATTTGAAAGGTTTGGAAGAATGATTGCTGTTTTTATGTGTTTGGTAAAAGAAATAGTTCATTAAAAGACTCCATTTCCAAGGTTAAAATGATTTTTATCCGTTTCTTAA

mRNA sequence

ATGTCTCAAGCCATTCACCTTCTTCCTCACAACCCTACAGATAGCAGATGCATACCTTGCTCTGGAGTTTCAGGACGAGCAGCCTCGTTCTCTTTTCACTCTTTATGTGCTGAACATAGAATCAATGTACCAGTCAAATTTAGACCTCTAAACTGTACTTCGTTGGGGGAGTCTTTTACGTGCAAAGCCAGCTCAGGAGGTCACAGGAGAAACCCAGATTTTCCAAAGCAAAATAGGCATGGCTTCTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGACAATGTTGATGAATCTGATTTATTATTGTCTAAGAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCCCAGGCCACCGCTACCCCAGGACCAAGGGAAAAGGAAATTGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCAGCAATGAAAGAAGAGAAGAAAGTGGAAGCTCAAGGACAAACGAAAGGGAGTGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATTCCGTGGAACAAGGGAAGAGAAGCAGTGGTGGGGGTGGCAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTACGATGAAGGAAGAGGCTCAAGCTTTTTTGGACTAAGTCCCAATTTGAGGGAGAAGGCCCAAAGACCCGTATCAAATTTCCAACGTAGATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCAACTCGACCAATGGTATGAATTCAAAAGGTGTGAAACCTAATGGAACTGATACAGGTTCTCAACTGAAAGGAAAGGTATGGACTCGGCAAGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGGGAGGCAGAACAGGAGCCAGAGCCGGACCAAGAGTTCGAATTGGAACCAGAGGCTGAAACATATGATCTAGAGCATGAAGGTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGTGTGTCATCAGACGTCGATGACACGTTTGAGGATGATGTTAAAGACAATGAGGAATTTGCAAAGCATGGTGAACAAGAACATGAGGACTTGAACTCATTGAAACTTGCTGAACTGAGGGCGATTGCCAAATCTCGTAGTTTGAGAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACGGTCAGTAA

Coding sequence (CDS)

ATGTCTCAAGCCATTCACCTTCTTCCTCACAACCCTACAGATAGCAGATGCATACCTTGCTCTGGAGTTTCAGGACGAGCAGCCTCGTTCTCTTTTCACTCTTTATGTGCTGAACATAGAATCAATGTACCAGTCAAATTTAGACCTCTAAACTGTACTTCGTTGGGGGAGTCTTTTACGTGCAAAGCCAGCTCAGGAGGTCACAGGAGAAACCCAGATTTTCCAAAGCAAAATAGGCATGGCTTCTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGACAATGTTGATGAATCTGATTTATTATTGTCTAAGAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCCCAGGCCACCGCTACCCCAGGACCAAGGGAAAAGGAAATTGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCAGCAATGAAAGAAGAGAAGAAAGTGGAAGCTCAAGGACAAACGAAAGGGAGTGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATTCCGTGGAACAAGGGAAGAGAAGCAGTGGTGGGGGTGGCAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTACGATGAAGGAAGAGGCTCAAGCTTTTTTGGACTAAGTCCCAATTTGAGGGAGAAGGCCCAAAGACCCGTATCAAATTTCCAACGTAGATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCAACTCGACCAATGGTATGAATTCAAAAGGTGTGAAACCTAATGGAACTGATACAGGTTCTCAACTGAAAGGAAAGGTATGGACTCGGCAAGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGGGAGGCAGAACAGGAGCCAGAGCCGGACCAAGAGTTCGAATTGGAACCAGAGGCTGAAACATATGATCTAGAGCATGAAGGTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGTGTGTCATCAGACGTCGATGACACGTTTGAGGATGATGTTAAAGACAATGAGGAATTTGCAAAGCATGGTGAACAAGAACATGAGGACTTGAACTCATTGAAACTTGCTGAACTGAGGGCGATTGCCAAATCTCGTAGTTTGAGAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACGGTCAGTAA

Protein sequence

MSQAIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ*
Homology
BLAST of CsaV3_3G022220 vs. NCBI nr
Match: XP_004151987.1 (rho-N domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus] >KAE8650656.1 hypothetical protein Csa_010944 [Cucumis sativus])

HSP 1 Score: 776.9 bits (2005), Expect = 8.3e-221
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0

Query: 1   MSQAIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFT 60
           MSQAIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFT
Sbjct: 1   MSQAIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFT 60

Query: 61  CKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPK 120
           CKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPK
Sbjct: 61  CKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPK 120

Query: 121 SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKLLRKHS 180
           SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKLLRKHS
Sbjct: 121 SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKLLRKHS 180

Query: 181 VEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSP 240
           VEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSP
Sbjct: 181 VEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSP 240

Query: 241 VPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQR 300
           VPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQR
Sbjct: 241 VPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQR 300

Query: 301 EAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDNEEFAK 360
           EAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDNEEFAK
Sbjct: 301 EAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDNEEFAK 360

Query: 361 HGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 406
           HGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ
Sbjct: 361 HGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 405

BLAST of CsaV3_3G022220 vs. NCBI nr
Match: XP_004151986.1 (rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 770.8 bits (1989), Expect = 6.0e-219
Identity = 405/410 (98.78%), Postives = 405/410 (98.78%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT-----DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLPHNPT     DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI
Sbjct: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240
           LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF
Sbjct: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240

Query: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300
           QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE
Sbjct: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300

Query: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360
           LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN
Sbjct: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360

Query: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 406
           EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ
Sbjct: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 410

BLAST of CsaV3_3G022220 vs. NCBI nr
Match: XP_008447423.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X9 [Cucumis melo])

HSP 1 Score: 690.6 bits (1781), Expect = 7.8e-195
Identity = 370/410 (90.24%), Postives = 385/410 (93.90%), Query Frame = 0

Query: 1   MSQAIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFT 60
           MSQAIHLLP NPTDSRC+PCSGVSGRAASFSF SLCAEH INVPVKFRPLNCTSLG SFT
Sbjct: 1   MSQAIHLLPRNPTDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFT 60

Query: 61  CKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPK 120
           CKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL S+NGPLLSISSTPK
Sbjct: 61  CKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPK 120

Query: 121 SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKLLRKHS 180
           SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKLLRKH+
Sbjct: 121 SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHA 180

Query: 181 VEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ-------RPVS 240
           VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLREKAQ       RP S
Sbjct: 181 VEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPAS 240

Query: 241 NFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHW 300
           NFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK KVWTRQESEREHW
Sbjct: 241 NFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHW 300

Query: 301 EELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVK 360
           EELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLGVSSD+DDTFEDD+K
Sbjct: 301 EELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIK 360

Query: 361 DNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
           DNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN
Sbjct: 361 DNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 406

BLAST of CsaV3_3G022220 vs. NCBI nr
Match: XP_008447421.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 684.5 bits (1765), Expect = 5.6e-193
Identity = 370/415 (89.16%), Postives = 385/415 (92.77%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT-----DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLP NPT     DSRC+PCSGVSGRAASFSF SLCAEH INVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPRNPTGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           G SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL S+NGPLLSI
Sbjct: 61  GVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ------ 240
           LRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLREKAQ      
Sbjct: 181 LRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSF 240

Query: 241 -RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQES 300
            RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK KVWTRQES
Sbjct: 241 RRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQES 300

Query: 301 EREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTF 360
           EREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLGVSSD+DDTF
Sbjct: 301 EREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTF 360

Query: 361 EDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
           EDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN
Sbjct: 361 EDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 411

BLAST of CsaV3_3G022220 vs. NCBI nr
Match: XP_008447419.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X6 [Cucumis melo])

HSP 1 Score: 681.0 bits (1756), Expect = 6.2e-192
Identity = 370/424 (87.26%), Postives = 385/424 (90.80%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT--------------DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVK 60
           MSQAIHLLP NPT              DSRC+PCSGVSGRAASFSF SLCAEH INVPVK
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVK 60

Query: 61  FRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLL 120
           FRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL 
Sbjct: 61  FRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLS 120

Query: 121 SKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGS 180
           S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGS
Sbjct: 121 SRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGS 180

Query: 181 ETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLRE 240
           ETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLRE
Sbjct: 181 ETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLRE 240

Query: 241 KAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLK 300
           KAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK
Sbjct: 241 KAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLK 300

Query: 301 GKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLG 360
            KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLG
Sbjct: 301 AKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLG 360

Query: 361 VSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 404
           VSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQ
Sbjct: 361 VSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 420

BLAST of CsaV3_3G022220 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.5e-58
Identity = 177/403 (43.92%), Postives = 242/403 (60.05%), Query Frame = 0

Query: 13  TDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNP 72
           +DSRC   S VS R  +    S C +H+ N  +K  P        SF C+ASSGG+RRNP
Sbjct: 20  SDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR-----SSFVCRASSGGYRRNP 79

Query: 73  DFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREK 132
           DF + N+HG+ R  NRQ+  RE  D ++ SD+L S+NGPL ++SS+PK QAT++PGPREK
Sbjct: 80  DFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPGPREK 139

Query: 133 EIVELFRKVQAQLRER-AAMKEEKKVE--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSG 192
           EIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ KR   
Sbjct: 140 EIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKRQV- 199

Query: 193 GGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSPVPRVKYQPI 252
              SS  ++  + V +    D        G   N      RP S+F+R+SPVPR +  P 
Sbjct: 200 SKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDNNASSFTRPTSSFRRKSPVPRSQSPPA 259

Query: 253 YPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQREAEQEPEP- 312
           Y  E+  + ++  +          T +Q K  V    E E E   E + + E E EP P 
Sbjct: 260 YSSEATFDQSSSYSV---------TWTQKKDTVELHDEPEHEPAYEHEHEPENESEPGPV 319

Query: 313 ----DQEFELEPEAETYDLEHEGDEMEPELVN----LLGVSSDVDDTFEDDVKDNEEFAK 372
               + + EL+PE+ ++  E E D++  ++++    +L V SD D++ +D  +D++E   
Sbjct: 320 TTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSDDDESLDDADEDSDEAE- 379

Query: 373 HGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
             E+  +DL+ LKL ELR IAKSR L+G SKMKK+ELV+LL +
Sbjct: 380 --EEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

BLAST of CsaV3_3G022220 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.5e-35
Identity = 129/359 (35.93%), Postives = 197/359 (54.87%), Query Frame = 0

Query: 58  SFTCKASSGGHR-RNPDFPKQNRHGFSRSRNRQNEERESLDNVDE--SDLLLSKNGPLLS 117
           S  C A+   HR R+ D  +  + G +R +++  +E++  +N+DE  +D++ SKNGP +S
Sbjct: 39  SLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPIS 98

Query: 118 ISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSE-TVDSLL 177
           ++S  + QAT+ PG REKEIVELF++VQAQLR R   KEEKK E Q + +G   +VDSLL
Sbjct: 99  LTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPE-QAKAQGERGSVDSLL 158

Query: 178 KLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKA----- 237
            LLRKHSV+Q ++S        K+ S +  K +      + SS F  +    E+      
Sbjct: 159 NLLRKHSVDQRRKS-----GDEKEQSVDQTKRSNESGNKQNSSIFIKNDTQEEQKKPHPA 218

Query: 238 --QRPVSNFQRRSPVPRVKYQPI--YPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWT 297
             +RP SNF+RRSPVP VK+QP+     E ++N+ N    +  KP        L+ K  T
Sbjct: 219 AFKRPASNFRRRSPVPNVKFQPVTNVDAERVINNINDAVQE-AKPT-------LENKAAT 278

Query: 298 RQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDV 357
             E +     E  S  E E     D +   + E +  D +    E +   + +  V   +
Sbjct: 279 -DEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPI-I 338

Query: 358 DDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
           D++ +  +K +            DL++LK+ ELR +AKSR ++G+SKMKK++LV+LLSN
Sbjct: 339 DESHDTTLKSS--------LGGPDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSN 373

BLAST of CsaV3_3G022220 vs. ExPASy TrEMBL
Match: A0A0A0L7X8 (Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 2.9e-219
Identity = 405/410 (98.78%), Postives = 405/410 (98.78%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT-----DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLPHNPT     DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI
Sbjct: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240
           LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF
Sbjct: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240

Query: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300
           QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE
Sbjct: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300

Query: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360
           LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN
Sbjct: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360

Query: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 406
           EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ
Sbjct: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 410

BLAST of CsaV3_3G022220 vs. ExPASy TrEMBL
Match: A0A1S3BI13 (rho-N domain-containing protein 1, chloroplastic isoform X9 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.8e-195
Identity = 370/410 (90.24%), Postives = 385/410 (93.90%), Query Frame = 0

Query: 1   MSQAIHLLPHNPTDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFT 60
           MSQAIHLLP NPTDSRC+PCSGVSGRAASFSF SLCAEH INVPVKFRPLNCTSLG SFT
Sbjct: 1   MSQAIHLLPRNPTDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSLGVSFT 60

Query: 61  CKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPK 120
           CKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL S+NGPLLSISSTPK
Sbjct: 61  CKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSISSTPK 120

Query: 121 SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKLLRKHS 180
           SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKLLRKH+
Sbjct: 121 SQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHA 180

Query: 181 VEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ-------RPVS 240
           VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLREKAQ       RP S
Sbjct: 181 VEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSFRRPAS 240

Query: 241 NFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHW 300
           NFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK KVWTRQESEREHW
Sbjct: 241 NFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQESEREHW 300

Query: 301 EELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVK 360
           EELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLGVSSD+DDTFEDD+K
Sbjct: 301 EELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTFEDDIK 360

Query: 361 DNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
           DNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN
Sbjct: 361 DNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 406

BLAST of CsaV3_3G022220 vs. ExPASy TrEMBL
Match: A0A1S3BHF2 (rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.7e-193
Identity = 370/415 (89.16%), Postives = 385/415 (92.77%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT-----DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLP NPT     DSRC+PCSGVSGRAASFSF SLCAEH INVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPRNPTGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           G SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL S+NGPLLSI
Sbjct: 61  GVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ------ 240
           LRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLREKAQ      
Sbjct: 181 LRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSF 240

Query: 241 -RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQES 300
            RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK KVWTRQES
Sbjct: 241 RRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQES 300

Query: 301 EREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTF 360
           EREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLGVSSD+DDTF
Sbjct: 301 EREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTF 360

Query: 361 EDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
           EDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN
Sbjct: 361 EDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 411

BLAST of CsaV3_3G022220 vs. ExPASy TrEMBL
Match: A0A1S3BIA8 (rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 3.0e-192
Identity = 370/424 (87.26%), Postives = 385/424 (90.80%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT--------------DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVK 60
           MSQAIHLLP NPT              DSRC+PCSGVSGRAASFSF SLCAEH INVPVK
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVK 60

Query: 61  FRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLL 120
           FRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL 
Sbjct: 61  FRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLS 120

Query: 121 SKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGS 180
           S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGS
Sbjct: 121 SRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGS 180

Query: 181 ETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLRE 240
           ETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLRE
Sbjct: 181 ETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLRE 240

Query: 241 KAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLK 300
           KAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK
Sbjct: 241 KAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLK 300

Query: 301 GKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLG 360
            KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLG
Sbjct: 301 AKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLG 360

Query: 361 VSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 404
           VSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQ
Sbjct: 361 VSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 420

BLAST of CsaV3_3G022220 vs. ExPASy TrEMBL
Match: A0A1S4DXI1 (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 370/429 (86.25%), Postives = 385/429 (89.74%), Query Frame = 0

Query: 1   MSQAIHLLPHNPT-------------------DSRCIPCSGVSGRAASFSFHSLCAEHRI 60
           MSQAIHLLP NPT                   DSRC+PCSGVSGRAASFSF SLCAEH I
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGI 60

Query: 61  NVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDE 120
           NVPVKFRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDE
Sbjct: 61  NVPVKFRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQG 180
           SDLL S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLS 240
           QTKGSETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLS
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLS 240

Query: 241 PNLREKAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDT 300
           PNLREKAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+T
Sbjct: 241 PNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTET 300

Query: 301 GSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPEL 360
           GSQLK KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPEL
Sbjct: 301 GSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPEL 360

Query: 361 VNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKK 404
           VNLLGVSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKK
Sbjct: 361 VNLLGVSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKK 420

BLAST of CsaV3_3G022220 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 227.6 bits (579), Expect = 1.8e-59
Identity = 177/403 (43.92%), Postives = 242/403 (60.05%), Query Frame = 0

Query: 13  TDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNP 72
           +DSRC   S VS R  +    S C +H+ N  +K  P        SF C+ASSGG+RRNP
Sbjct: 20  SDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR-----SSFVCRASSGGYRRNP 79

Query: 73  DFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREK 132
           DF + N+HG+ R  NRQ+  RE  D ++ SD+L S+NGPL ++SS+PK QAT++PGPREK
Sbjct: 80  DFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPGPREK 139

Query: 133 EIVELFRKVQAQLRER-AAMKEEKKVE--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSG 192
           EIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ KR   
Sbjct: 140 EIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKRQV- 199

Query: 193 GGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSPVPRVKYQPI 252
              SS  ++  + V +    D        G   N      RP S+F+R+SPVPR +  P 
Sbjct: 200 SKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDNNASSFTRPTSSFRRKSPVPRSQSPPA 259

Query: 253 YPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQREAEQEPEP- 312
           Y  E+  + ++  +          T +Q K  V    E E E   E + + E E EP P 
Sbjct: 260 YSSEATFDQSSSYSV---------TWTQKKDTVELHDEPEHEPAYEHEHEPENESEPGPV 319

Query: 313 ----DQEFELEPEAETYDLEHEGDEMEPELVN----LLGVSSDVDDTFEDDVKDNEEFAK 372
               + + EL+PE+ ++  E E D++  ++++    +L V SD D++ +D  +D++E   
Sbjct: 320 TTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSDDDESLDDADEDSDEAE- 379

Query: 373 HGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 404
             E+  +DL+ LKL ELR IAKSR L+G SKMKK+ELV+LL +
Sbjct: 380 --EEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

BLAST of CsaV3_3G022220 vs. TAIR 10
Match: AT1G06190.2 (Rho termination factor )

HSP 1 Score: 179.5 bits (454), Expect = 5.5e-45
Identity = 123/251 (49.00%), Postives = 158/251 (62.95%), Query Frame = 0

Query: 13  TDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNP 72
           +DSRC   S VS R  +    S C +H+ N  +K  P        SF C+ASSGG+RRNP
Sbjct: 20  SDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR-----SSFVCRASSGGYRRNP 79

Query: 73  DFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREK 132
           DF + N+HG+ R  NRQ+  RE  D ++ SD+L S+NGPL ++SS+PK QAT++PGPREK
Sbjct: 80  DFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNLSSSPKFQATSSPGPREK 139

Query: 133 EIVELFRKVQAQLRER-AAMKEEKKVE--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSG 192
           EIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ KR   
Sbjct: 140 EIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSLLKLLRKHSGEQSKRQV- 199

Query: 193 GGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSPVPRVKYQPI 252
              SS  ++  + V +    D        G   N      RP S+F+R+SPVPR +  P 
Sbjct: 200 SKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDNNASSFTRPTSSFRRKSPVPRSQSPPA 258

Query: 253 YPGESIVNSTN 261
           Y  E+  + ++
Sbjct: 260 YSSEATFDQSS 258

BLAST of CsaV3_3G022220 vs. TAIR 10
Match: AT2G31150.1 (ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism )

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22
Identity = 120/309 (38.83%), Postives = 154/309 (49.84%), Query Frame = 0

Query: 68  HRR-NPDFPKQNRHGFSRSRNRQNEERESL-DNVDESDLLLSKNGPLLSISSTPKSQATA 127
           HRR NPDF + N+HGF R RNR+NE+++ L D   E D+L SKN                
Sbjct: 26  HRRNNPDFSRNNKHGF-RGRNRRNEDKDGLVDGGLEDDMLSSKN---------------- 85

Query: 128 TPGPREKEIVELFRKVQAQLRER-AAMKEEKKVEAQGQTKG---SETVDSLLKLLRKHSV 187
                EKEIVELF+KVQ QLR R AA KEEKK E   + +G   SETVDSLLKLLRKHS 
Sbjct: 86  -----EKEIVELFKKVQVQLRARAAAKKEEKKTEEASKGQGGKESETVDSLLKLLRKHSG 145

Query: 188 EQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKA---QRPVSNFQRR 247
           EQ K+      S  +    +   E     +   SS F  S N    A    RP S+F+R 
Sbjct: 146 EQSKKQVSNFNSEKQLQRDDDASER----QNHSSSRFD-SRNKDHNATPFTRPASSFKRN 205

Query: 248 SPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQS 307
           SPVPR K Q  Y  E+I +  +  +          T +Q K +V +R E E E   E +S
Sbjct: 206 SPVPRHKSQASYSSEAIFDEASSYSV---------TWTQKKDQVESRDEPEYE--PEPES 265

Query: 308 QREAEQEPEPDQEFELEPEAETYDLE-----------HEGDEMEPELVNLLGVSSDVDDT 357
             E + EPEP+ E+E E E E   LE            E DE E +   ++   SD D++
Sbjct: 266 AAEYD-EPEPEAEYEPESEPELAILESVSELKLESFYQEEDEDEEDHNFVIDELSDDDES 295

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004151987.18.3e-221100.00rho-N domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus] >K... [more]
XP_004151986.16.0e-21998.78rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus][more]
XP_008447423.17.8e-19590.24PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X9 [Cucumis ... [more]
XP_008447421.15.6e-19389.16PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis ... [more]
XP_008447419.16.2e-19287.26PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X6 [Cucumis ... [more]
Match NameE-valueIdentityDescription
Q94K752.5e-5843.92Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q8L4E78.5e-3535.93SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A0A0L7X82.9e-21998.78Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 ... [more]
A0A1S3BI133.8e-19590.24rho-N domain-containing protein 1, chloroplastic isoform X9 OS=Cucumis melo OX=3... [more]
A0A1S3BHF22.7e-19389.16rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3... [more]
A0A1S3BIA83.0e-19287.26rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3... [more]
A0A1S4DXI11.1e-19186.25rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3... [more]
Match NameE-valueIdentityDescription
AT1G06190.11.8e-5943.92Rho termination factor [more]
AT1G06190.25.5e-4549.00Rho termination factor [more]
AT2G31150.11.7e-2238.83ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..282
NoneNo IPR availablePANTHERPTHR34449:SF5RHO-N DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTICcoord: 1..403
NoneNo IPR availablePANTHERPTHR34449RHO TERMINATION FACTORcoord: 1..403
IPR011112Rho termination factor, N-terminalSMARTSM00959Rho_N_2_acoord: 368..405
e-value: 6.1E-4
score: 29.1
IPR011112Rho termination factor, N-terminalPFAMPF07498Rho_Ncoord: 368..398
e-value: 8.4E-7
score: 28.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G022220.1CsaV3_3G022220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination