CsaV3_3G021320 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G021320
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionCarboxypeptidase Y-like
Locationchr3: 18189698 .. 18189970 (-)
RNA-Seq ExpressionCsaV3_3G021320
SyntenyCsaV3_3G021320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCATTTCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCCCACCACCTCCGCACAAACAACCACAATCTGATGTTGGCGGTCCTCAAATGGTCATTCCACCCCCTCCTATACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCACAAACATCCACAATCTGATGTTGGCGGCCTCAAATGGTCATTCCACCCCTCATCCACACCATCATCTTGA

mRNA sequence

ATGGTCATTTCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCCCACCACCTCCGCACAAACAACCACAATCTGATGTTGGCGGTCCTCAAATGGTCATTCCACCCCCTCCTATACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCACAAACATCCACAATCTGATGTTGGCGGCCTCAAATGGTCATTCCACCCCTCATCCACACCATCATCTTGA

Coding sequence (CDS)

ATGGTCATTTCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCCCACCACCTCCGCACAAACAACCACAATCTGATGTTGGCGGTCCTCAAATGGTCATTCCACCCCCTCCTATACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCACAAACATCCACAATCTGATGTTGGCGGCCTCAAATGGTCATTCCACCCCTCATCCACACCATCATCTTGA

Protein sequence

MVISPPPPHHHLNSDVGGPQMVIPPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQMVIPPPPPHKHPQSDVGGLKWSFHPSSTPSS*
Homology
BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KAE8650612.1 (hypothetical protein Csa_010745 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 3.3e-45
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MVISPPPPHHHLNSDVGGPQMVIPPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQM 60
          MVISPPPPHHHLNSDVGGPQMVIPPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQM
Sbjct: 1  MVISPPPPHHHLNSDVGGPQMVIPPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQM 60

Query: 61 VIPPPPPHKHPQSDVGGLKWSFHPSSTPSS 91
          VIPPPPPHKHPQSDVGGLKWSFHPSSTPSS
Sbjct: 61 VIPPPPPHKHPQSDVGGLKWSFHPSSTPSS 90

BLAST of CsaV3_3G021320 vs. NCBI nr
Match: XP_031737527.1 (carboxypeptidase Y-like [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           +VI PPPPHHHLNSDVGGPQMVI PPPPHKQPQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 81  LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 140

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPHKHPQSDVGG
Sbjct: 141 MVIPPPPPHKHPQSDVGG 158

BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KAE8650611.1 (hypothetical protein Csa_010263 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           +VI PPPPHHHLNSDVGGPQMVI PPPPHKQPQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 41  LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 100

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPHKHPQSDVGG
Sbjct: 101 MVIPPPPPHKHPQSDVGG 118

BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KAE8650608.1 (hypothetical protein Csa_010543 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           +VI PPPPHHHLNSDVGGPQMVI PPPPHKQPQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 100 LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 159

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPHKHPQSDVGG
Sbjct: 160 MVIPPPPPHKHPQSDVGG 177

BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KGN57853.2 (hypothetical protein Csa_010303 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           +VI PPPPHHHLNSDVGGPQMVI PPPPHKQPQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 61  LVIPPPPPHHHLNSDVGGPQMVIPPPPPHKQPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 120

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPHKHPQSDVGG
Sbjct: 121 MVIPPPPPHKHPQSDVGG 138

BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5A7UNF2 (Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002060 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.6e-31
Identity = 70/78 (89.74%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           MVI PPPPHHHLNSDVGGPQMVI PPPPHK PQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 41  MVIPPPPPHHHLNSDVGGPQMVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 100

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPH H  SD+GG
Sbjct: 101 MVIPPPPPHHHLDSDIGG 118

BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5D3CDK8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.6e-31
Identity = 70/78 (89.74%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 1  MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
          MVI PPPPHHHLNSDVGGPQMVI PPPPHK PQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 21 MVIPPPPPHHHLNSDVGGPQMVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 80

Query: 61 MVIPPPPPHKHPQSDVGG 78
          MVIPPPPPH H  SD+GG
Sbjct: 81 MVIPPPPPHHHLDSDIGG 98

BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5A7UL62 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.3e-30
Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           MVI PPPPH H  SDVGGPQMVI PPPPHK PQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 79  MVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 138

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPHK PQSDVGG
Sbjct: 139 MVIPPPPPHKFPQSDVGG 156

BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5D3CIK1 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.3e-30
Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVI-PPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           MVI PPPPH H  SDVGGPQMVI PPPPHK PQSDVGGPQMVIPPPP HHHLDSDVGGPQ
Sbjct: 79  MVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 138

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVIPPPPPHK PQSDVGG
Sbjct: 139 MVIPPPPPHKFPQSDVGG 156

BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5A7VHN8 (Formin-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00130 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.8e-29
Identity = 69/78 (88.46%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 1   MVISPPPPHHHLNSDVGGPQMVIP-PPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQ 60
           MVI PPPPHHHL+SDVGGPQMVIP PPPHK PQSDVGGPQMVIPPPP HHHLD DV GPQ
Sbjct: 119 MVIPPPPPHHHLDSDVGGPQMVIPQPPPHKFPQSDVGGPQMVIPPPPPHHHLDFDVDGPQ 178

Query: 61  MVIPPPPPHKHPQSDVGG 78
           MVI PPPPHK PQSDVGG
Sbjct: 179 MVIAPPPPHKFPQSDVGG 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8650612.13.3e-45100.00hypothetical protein Csa_010745 [Cucumis sativus][more]
XP_031737527.11.3e-3394.87carboxypeptidase Y-like [Cucumis sativus][more]
KAE8650611.11.3e-3394.87hypothetical protein Csa_010263 [Cucumis sativus][more]
KAE8650608.11.3e-3394.87hypothetical protein Csa_010543 [Cucumis sativus][more]
KGN57853.21.3e-3394.87hypothetical protein Csa_010303 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UNF28.6e-3189.74Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CDK88.6e-3189.74Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=... [more]
A0A5A7UL627.3e-3089.74Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE... [more]
A0A5D3CIK17.3e-3089.74Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=... [more]
A0A5A7VHN82.8e-2988.46Formin-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G021320.1CsaV3_3G021320.1mRNA