CsaV3_3G021320 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCATTTCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCCCACCACCTCCGCACAAACAACCACAATCTGATGTTGGCGGTCCTCAAATGGTCATTCCACCCCCTCCTATACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCACAAACATCCACAATCTGATGTTGGCGGCCTCAAATGGTCATTCCACCCCTCATCCACACCATCATCTTGA ATGGTCATTTCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCCCACCACCTCCGCACAAACAACCACAATCTGATGTTGGCGGTCCTCAAATGGTCATTCCACCCCCTCCTATACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCACAAACATCCACAATCTGATGTTGGCGGCCTCAAATGGTCATTCCACCCCTCATCCACACCATCATCTTGA ATGGTCATTTCACCCCCTCCACCACACCATCATCTTAATTCGGACGTTGGTGGCCCTCAAATGGTCATCCCACCACCTCCGCACAAACAACCACAATCTGATGTTGGCGGTCCTCAAATGGTCATTCCACCCCCTCCTATACACCATCATCTTGATTCTGATGTTGGTGGCCCTCAAATGGTCATTCCACCACCTCCTCCGCACAAACATCCACAATCTGATGTTGGCGGCCTCAAATGGTCATTCCACCCCTCATCCACACCATCATCTTGA MVISPPPPHHHLNSDVGGPQMVIPPPPHKQPQSDVGGPQMVIPPPPIHHHLDSDVGGPQMVIPPPPPHKHPQSDVGGLKWSFHPSSTPSS* Homology
BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KAE8650612.1 (hypothetical protein Csa_010745 [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 3.3e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. NCBI nr
Match: XP_031737527.1 (carboxypeptidase Y-like [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KAE8650611.1 (hypothetical protein Csa_010263 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KAE8650608.1 (hypothetical protein Csa_010543 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. NCBI nr
Match: KGN57853.2 (hypothetical protein Csa_010303 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5A7UNF2 (Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002060 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.6e-31 Identity = 70/78 (89.74%), Postives = 71/78 (91.03%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5D3CDK8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.6e-31 Identity = 70/78 (89.74%), Postives = 71/78 (91.03%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5A7UL62 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.3e-30 Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5D3CIK1 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.3e-30 Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of CsaV3_3G021320 vs. ExPASy TrEMBL
Match: A0A5A7VHN8 (Formin-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00130 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.8e-29 Identity = 69/78 (88.46%), Postives = 70/78 (89.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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