CsaV3_3G020740 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020740
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 16957678 .. 16957914 (-)
RNA-Seq ExpressionCsaV3_3G020740
SyntenyCsaV3_3G020740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACCCTCTCGCCAAGCCTAAACGCCTAGCAAACGTCTTAAGGTTTGGCCACCAAGCCTTAACTCCAATGCATGGTCTTCTTGGTGTTTGTCTTGCCGCCCAACATCCTTCCTTGTGTGGCCATGTTTCTCGTCCAACTAACCTCTCAAAGCCTTCCTCATGTGGTCCTTGTCCGCCCAAAGACAAACCTCAGATGTCTAAGCATTACTTCAATGAGGTTACCCTTACTTGA

mRNA sequence

ATGGACAACCCTCTCGCCAAGCCTAAACGCCTAGCAAACGTCTTAAGGTTTGGCCACCAAGCCTTAACTCCAATGCATGGTCTTCTTGGTGTTTGTCTTGCCGCCCAACATCCTTCCTTGTGTGGCCATGTTTCTCGTCCAACTAACCTCTCAAAGCCTTCCTCATGTGGTCCTTGTCCGCCCAAAGACAAACCTCAGATGTCTAAGCATTACTTCAATGAGGTTACCCTTACTTGA

Coding sequence (CDS)

ATGGACAACCCTCTCGCCAAGCCTAAACGCCTAGCAAACGTCTTAAGGTTTGGCCACCAAGCCTTAACTCCAATGCATGGTCTTCTTGGTGTTTGTCTTGCCGCCCAACATCCTTCCTTGTGTGGCCATGTTTCTCGTCCAACTAACCTCTCAAAGCCTTCCTCATGTGGTCCTTGTCCGCCCAAAGACAAACCTCAGATGTCTAAGCATTACTTCAATGAGGTTACCCTTACTTGA

Protein sequence

MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCPPKDKPQMSKHYFNEVTLT*
Homology
[Close]
BLAST of CsaV3_3G020740 vs. NCBI nr
Match: KGN57760.1 (hypothetical protein Csa_011483 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 3.1e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60
          MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP
Sbjct: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60

Query: 61 PKDKPQMSKHYFNEVTLT 79
          PKDKPQMSKHYFNEVTLT
Sbjct: 61 PKDKPQMSKHYFNEVTLT 78

[Close]
BLAST of CsaV3_3G020740 vs. ExPASy TrEMBL
Match: A0A0A0L6Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G282480 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60
          MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP
Sbjct: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60

Query: 61 PKDKPQMSKHYFNEVTLT 79
          PKDKPQMSKHYFNEVTLT
Sbjct: 61 PKDKPQMSKHYFNEVTLT 78

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020740 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57760.13.1e-39100.00hypothetical protein Csa_011483 [Cucumis sativus][more]
BLAST of CsaV3_3G020740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6Z41.5e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G282480 PE=4 SV=1[more]
BLAST of CsaV3_3G020740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020740.1CsaV3_3G020740.1mRNA