Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACAATGGCAATGCTATGGGTACAACACAACCACTCATTCTAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATGCGTATGAAGACTCTTCTCAGATCTCAAGACTTATGGGACTTAGTAGAACACAACTATGCGGATCCTGACGACGAAGGCAAGTTGCGGGAGAAGAGGAGAAAGGACTCTAAGGCGTTAGTGATTATTCAACAAGCAGTCCATGACAGTGGTTTTTCGCGGATTGGTACAACAACAACGTCAAAAGAAGCGTGGCTGATTTTGCAAAAGGCATTTCGAGGAGATTTAAGAGTACTTGTGGTAAAATTGCAATCACTTAGAAAAGAATTTGAGACCTTGATGATGAAAAATAGAGAATCAATTGCTAATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTACAGATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCTAAAGTTCGATCAAGTTGTGGCCGCAATAGAAGAATCAAAGGATCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTCAAGCACATGAGTCAAGAATCAATAGATCGATGGAAAGAAACGAAGAAAAAGCGTTTCAGGTAAAGGATGTAGTTCCAAAGTATAATAACAGTGATCGTGTGATGACTCGAGGCAGAGGAAGAGGAGGATATCGTGGTCAAGGTCGTGGAACTGAAAAAGGATGCAAACAAAATGAAGAAAAAGGGCAGTTCAGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATGGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGGTACAAAAATCAGCGAGCCAATTTTTCAGCAGAGAATGAAGCATAAGAGAATAATGGAAAGGATGAAAATAAGTTGTTTATGGCAAACGTCACTAGTGATCAAAAGACAGCGGAGGTGTGTTTCATTGATAGCGGGTGTTCGAATCACATGACAGGCTTGAAGCCTATATTCAATGAGCTTAACGAAGGAGAAAAGTTGAAGGTGGAACTTGGAAACAACAAGGAGCTACAAGTAGAACGCAAAGGAACGGTTGGAATTGAAACTCACCATGGAAATAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAGCTAATGGAGAGTGGGCATTCTATCTTGTTTGATGATGGTGCGTGCTTGATAAAAAATAAGCAAACATTATGA
mRNA sequence
ATGGACAACAATGGCAATGCTATGGGTACAACACAACCACTCATTCTAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATGCGTATGAAGACTCTTCTCAGATCTCAAGACTTATGGGACTTAGTAGAACACAACTATGCGGATCCTGACGACGAAGGCAAGTTGCGGGAGAAGAGGAGAAAGGACTCTAAGGCGTTAGTGATTATTCAACAAGCAGTCCATGACAGTGGTTTTTCGCGGATTGGTACAACAACAACGTCAAAAGAAGCGTGGCTGATTTTGCAAAAGGCATTTCGAGGAGATTTAAGAGTACTTGTGGTAAAATTGCAATCACTTAGAAAAGAATTTGAGACCTTGATGATGAAAAATAGAGAATCAATTGCTAATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTACAGATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCTAAAGTTCGATCAAGTTGTGGCCGCAATAGAAGAATCAAAGGATCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTCAAGCACATGAGTCAAGAATCAATAGATCGATGGAAAGAAACGAAGAAAAAGCGTTTCAGGTAAAGGATGTAGTTCCAAAGTATAATAACAGTGATCGTGTGATGACTCGAGGCAGAGGAAGAGGAGGATATCGTGGTCAAGGTCGTGGAACTGAAAAAGGATGCAAACAAAATGAAGAAAAAGGGCAGTTCAGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATGGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGTGATCAAAAGACAGCGGAGGTGTGTTTCATTGATAGCGGGTGTTCGAATCACATGACAGGCTTGAAGCCTATATTCAATGAGCTTAACGAAGGAGAAAAGTTGAAGGTGGAACTTGGAAACAACAAGGAGCTACAAGTAGAACGCAAAGGAACGGTTGGAATTGAAACTCACCATGGAAATAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAGCTAATGGAGAGTGGGCATTCTATCTTGTTTGATGATGGTGCGTGCTTGATAAAAAATAAGCAAACATTATGA
Coding sequence (CDS)
ATGGACAACAATGGCAATGCTATGGGTACAACACAACCACTCATTCTAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATGCGTATGAAGACTCTTCTCAGATCTCAAGACTTATGGGACTTAGTAGAACACAACTATGCGGATCCTGACGACGAAGGCAAGTTGCGGGAGAAGAGGAGAAAGGACTCTAAGGCGTTAGTGATTATTCAACAAGCAGTCCATGACAGTGGTTTTTCGCGGATTGGTACAACAACAACGTCAAAAGAAGCGTGGCTGATTTTGCAAAAGGCATTTCGAGGAGATTTAAGAGTACTTGTGGTAAAATTGCAATCACTTAGAAAAGAATTTGAGACCTTGATGATGAAAAATAGAGAATCAATTGCTAATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTACAGATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCTAAAGTTCGATCAAGTTGTGGCCGCAATAGAAGAATCAAAGGATCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTCAAGCACATGAGTCAAGAATCAATAGATCGATGGAAAGAAACGAAGAAAAAGCGTTTCAGGTAAAGGATGTAGTTCCAAAGTATAATAACAGTGATCGTGTGATGACTCGAGGCAGAGGAAGAGGAGGATATCGTGGTCAAGGTCGTGGAACTGAAAAAGGATGCAAACAAAATGAAGAAAAAGGGCAGTTCAGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATGGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGTGATCAAAAGACAGCGGAGGTGTGTTTCATTGATAGCGGGTGTTCGAATCACATGACAGGCTTGAAGCCTATATTCAATGAGCTTAACGAAGGAGAAAAGTTGAAGGTGGAACTTGGAAACAACAAGGAGCTACAAGTAGAACGCAAAGGAACGGTTGGAATTGAAACTCACCATGGAAATAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAGCTAATGGAGAGTGGGCATTCTATCTTGTTTGATGATGGTGCGTGCTTGATAAAAAATAAGCAAACATTATGA
Protein sequence
MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKRRKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETLMMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLSTFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGRGTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADCCDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVERKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTL*
Homology
BLAST of CsaV3_3G020670 vs. NCBI nr
Match:
KAE8650579.1 (hypothetical protein Csa_010963 [Cucumis sativus])
HSP 1 Score: 762.7 bits (1968), Expect = 1.5e-216
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR
Sbjct: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL
Sbjct: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS
Sbjct: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR
Sbjct: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
Query: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADCCDQKTAEVCFIDSGCSNHMT 300
GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADCCDQKTAEVCFIDSGCSNHMT
Sbjct: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADCCDQKTAEVCFIDSGCSNHMT 300
Query: 301 GLKPIFNELNEGEKLKVELGNNKELQVERKGTVGIETHHGNRILTNVQYVPDIGYNLLSV 360
GLKPIFNELNEGEKLKVELGNNKELQVERKGTVGIETHHGNRILTNVQYVPDIGYNLLSV
Sbjct: 301 GLKPIFNELNEGEKLKVELGNNKELQVERKGTVGIETHHGNRILTNVQYVPDIGYNLLSV 360
Query: 361 GQLMESGHSILFDDGACLIKNKQTL 386
GQLMESGHSILFDDGACLIKNKQTL
Sbjct: 361 GQLMESGHSILFDDGACLIKNKQTL 385
BLAST of CsaV3_3G020670 vs. NCBI nr
Match:
TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])
HSP 1 Score: 585.5 bits (1508), Expect = 3.4e-163
Identity = 310/387 (80.10%), Postives = 327/387 (84.50%), Query Frame = 0
Query: 30 MKTLLRSQDLWDLVEHNYADPDDEGKLREKRRKDSKALVIIQQAVHDSGFSRIGTTTTSK 89
+KTLLRSQDLWDLVE Y DPDDEGKLRE R+KDSKALVIIQQAVHDS FSRI T TTSK
Sbjct: 117 VKTLLRSQDLWDLVEQGYVDPDDEGKLRENRKKDSKALVIIQQAVHDSVFSRIATATTSK 176
Query: 90 EAWLILQKAFRGDLRVLVVKLQSLRKEFETLMMKNRESIANFLSRATTIISQMQTYGETI 149
+AWLILQKAF+GD RVL+VKLQSLR++FETLMMKN ESIA+FLSRATTIISQMQTYGETI
Sbjct: 177 QAWLILQKAFQGDSRVLMVKLQSLRRDFETLMMKNGESIADFLSRATTIISQMQTYGETI 236
Query: 150 TDQTIVEKVLRSLTLKFDQVVAAIEESKDLSTFTFIELMGSLQAHESRINRSMERNEEKA 209
DQTIVEKVLRSLT KFD VVAAIEESK+L TFTFIELMGSL+AHESRINRSMERNEEKA
Sbjct: 237 KDQTIVEKVLRSLTPKFDHVVAAIEESKNLFTFTFIELMGSLEAHESRINRSMERNEEKA 296
Query: 210 FQVKDVVPKYNNSDRVMTRGRGRGGYRGQGRGTEKGCKQNEEKGQFRVQSSNKANIQCYH 269
FQVKD VPKYN+SDRVMTRGRGRGGYRG+G GTEKGC +NE + QF VQSSNKANIQCYH
Sbjct: 297 FQVKDAVPKYNDSDRVMTRGRGRGGYRGRGHGTEKGCNRNEAQRQFGVQSSNKANIQCYH 356
Query: 270 GKKFGHVKADC--------------------------------CDQKTAEVCFIDSGCSN 329
KKFGHVKADC DQKTAEV FIDS CSN
Sbjct: 357 CKKFGHVKADCWYKNQRANFAAENEASENNGNCENKLFMTNIPSDQKTAEVWFIDSSCSN 416
Query: 330 HMTGLKPIFNELNEGEKLKVELGNNKELQVERKGTVGIETHHGNRILTNVQYVPDIGYNL 385
HMTGLKP+F ELNEGEKLKV+L N KELQVE KGTV IETHHGNRILTNVQYVPDIGYNL
Sbjct: 417 HMTGLKPVFKELNEGEKLKVKLRNGKELQVEGKGTVVIETHHGNRILTNVQYVPDIGYNL 476
BLAST of CsaV3_3G020670 vs. NCBI nr
Match:
TYK28117.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])
HSP 1 Score: 561.6 bits (1446), Expect = 5.2e-156
Identity = 304/416 (73.08%), Postives = 320/416 (76.92%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
M NNGN MGT QPLI IFKGEGYEFWS+RMKTLL SQDLWDLVE Y DPDDEGKL+E R
Sbjct: 1 MSNNGNVMGTAQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
KDSKALVIIQQAVHD+ FSRI TT ++FETL
Sbjct: 61 EKDSKALVIIQQAVHDNVFSRIAAATT---------------------------RDFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMKN ESIA+FLSRATTIISQMQTYGETITDQTIVEKVLRSLT KFD VV AIEESKDLS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVVAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
TFTFIELMGSLQAHESRIN SME+NEEKAF+VKDVVPKYN+SD VMT+G+G GGYR +GR
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNEEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 240
Query: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC-------------------- 300
GT KGC QNEE+ QF VQSSNKANIQCYH KKFGHVKADC
Sbjct: 241 GTGKGCNQNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNHRANFTEQNEASENNG 300
Query: 301 ------------CDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVE 360
DQKT EV FIDSG NHMT LKP+F ELNEGEKLKVELGN KELQVE
Sbjct: 301 NGENKLFMTNIPSDQKTTEVWFIDSGHLNHMTDLKPVFKELNEGEKLKVELGNGKELQVE 360
Query: 361 RKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 385
K T+GIETH+GNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT
Sbjct: 361 GKRTMGIETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 389
BLAST of CsaV3_3G020670 vs. NCBI nr
Match:
XP_031738054.1 (uncharacterized protein LOC116402652 [Cucumis sativus])
HSP 1 Score: 546.6 bits (1407), Expect = 1.7e-151
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR
Sbjct: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL
Sbjct: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS
Sbjct: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR
Sbjct: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
Query: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC 281
GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC
Sbjct: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC 280
BLAST of CsaV3_3G020670 vs. NCBI nr
Match:
KAA0055915.1 (copia protein [Cucumis melo var. makuwa])
HSP 1 Score: 544.7 bits (1402), Expect = 6.6e-151
Identity = 290/380 (76.32%), Postives = 312/380 (82.11%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
M NNGN MGTTQPLI IFKGEGYEFWS+RMKTLL SQDLWDLVE Y DPDDEGKL+E R
Sbjct: 1 MSNNGNVMGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
KD KALVI+QQAVHD+ FSRI TTSK+AWLILQKAF+GD RVLVVKLQSL+++FETL
Sbjct: 61 EKDPKALVIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMKN ESIA+FLSRATTIISQMQTYGETITDQTIVEKVLRSLT KFD VVAAIEESKDLS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
TFTFIELMGSLQAHESRIN SME+N+EKAF+VKDVVPKYN+SD VMT+G+G GGYR +GR
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 240
Query: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC-------------------- 300
GT KGC QNEE+ QF VQSSNKANIQCYH KKFGHVKADC
Sbjct: 241 GTGKGCNQNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNG 300
Query: 301 ------------CDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVE 349
DQKT EV FIDSG NHMTGLKP+F ELNEGEKLKVELGN+KELQVE
Sbjct: 301 KGENKLFMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVE 360
BLAST of CsaV3_3G020670 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 87/404 (21.53%), Postives = 161/404 (39.85%), Query Frame = 0
Query: 18 FKGEGYEFWSMRMKTLLRSQDLWDLVEHNYA-DPDDEGKLREKRRKDSKALVIIQQAVHD 77
F GE Y W R++ LL QD+ +V+ + DD K E+ K + I + + D
Sbjct: 11 FDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDSWKKAERCAKST-----IIEYLSD 70
Query: 78 SGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETLMMKNRESIANFLSRAT 137
S + + T+++ L + R + +LRK +L + + S+ +
Sbjct: 71 SFLNFATSDITARQILENLDAVYE---RKSLASQLALRKRLLSLKLSSEMSLLSHFHIFD 130
Query: 138 TIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEE-SKDLSTFTFIELMGSLQAHE 197
+IS++ G I + + +L +L +D ++ AIE S++ T F++ L E
Sbjct: 131 ELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK--NRLLDQE 190
Query: 198 SRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGRGTEKGCKQNEEKGQF 257
+I + N+ + +V NN+ + K K +
Sbjct: 191 IKIKN--DHNDTSKKVMNAIVHNNNNTYK------------------NNLFKNRVTKPKK 250
Query: 258 RVQSSNKANIQCYHGKKFGHVKADCCDQK------------------------------- 317
+ ++K ++C+H + GH+K DC K
Sbjct: 251 IFKGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNN 310
Query: 318 --TAEVC--FIDSGCSNHMTGLKPIFNELNE-GEKLKVELGNNKE-LQVERKGTVGIETH 377
+ C +DSG S+H+ + ++ + E LK+ + E + ++G V +
Sbjct: 311 TSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRND 370
Query: 378 HGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFD-DGACLIKN 382
H L +V + + NL+SV +L E+G SI FD G + KN
Sbjct: 371 H-EITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKN 383
BLAST of CsaV3_3G020670 vs. ExPASy TrEMBL
Match:
A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1)
HSP 1 Score: 585.5 bits (1508), Expect = 1.6e-163
Identity = 310/387 (80.10%), Postives = 327/387 (84.50%), Query Frame = 0
Query: 30 MKTLLRSQDLWDLVEHNYADPDDEGKLREKRRKDSKALVIIQQAVHDSGFSRIGTTTTSK 89
+KTLLRSQDLWDLVE Y DPDDEGKLRE R+KDSKALVIIQQAVHDS FSRI T TTSK
Sbjct: 117 VKTLLRSQDLWDLVEQGYVDPDDEGKLRENRKKDSKALVIIQQAVHDSVFSRIATATTSK 176
Query: 90 EAWLILQKAFRGDLRVLVVKLQSLRKEFETLMMKNRESIANFLSRATTIISQMQTYGETI 149
+AWLILQKAF+GD RVL+VKLQSLR++FETLMMKN ESIA+FLSRATTIISQMQTYGETI
Sbjct: 177 QAWLILQKAFQGDSRVLMVKLQSLRRDFETLMMKNGESIADFLSRATTIISQMQTYGETI 236
Query: 150 TDQTIVEKVLRSLTLKFDQVVAAIEESKDLSTFTFIELMGSLQAHESRINRSMERNEEKA 209
DQTIVEKVLRSLT KFD VVAAIEESK+L TFTFIELMGSL+AHESRINRSMERNEEKA
Sbjct: 237 KDQTIVEKVLRSLTPKFDHVVAAIEESKNLFTFTFIELMGSLEAHESRINRSMERNEEKA 296
Query: 210 FQVKDVVPKYNNSDRVMTRGRGRGGYRGQGRGTEKGCKQNEEKGQFRVQSSNKANIQCYH 269
FQVKD VPKYN+SDRVMTRGRGRGGYRG+G GTEKGC +NE + QF VQSSNKANIQCYH
Sbjct: 297 FQVKDAVPKYNDSDRVMTRGRGRGGYRGRGHGTEKGCNRNEAQRQFGVQSSNKANIQCYH 356
Query: 270 GKKFGHVKADC--------------------------------CDQKTAEVCFIDSGCSN 329
KKFGHVKADC DQKTAEV FIDS CSN
Sbjct: 357 CKKFGHVKADCWYKNQRANFAAENEASENNGNCENKLFMTNIPSDQKTAEVWFIDSSCSN 416
Query: 330 HMTGLKPIFNELNEGEKLKVELGNNKELQVERKGTVGIETHHGNRILTNVQYVPDIGYNL 385
HMTGLKP+F ELNEGEKLKV+L N KELQVE KGTV IETHHGNRILTNVQYVPDIGYNL
Sbjct: 417 HMTGLKPVFKELNEGEKLKVKLRNGKELQVEGKGTVVIETHHGNRILTNVQYVPDIGYNL 476
BLAST of CsaV3_3G020670 vs. ExPASy TrEMBL
Match:
A0A5D3DWC7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00230 PE=4 SV=1)
HSP 1 Score: 561.6 bits (1446), Expect = 2.5e-156
Identity = 304/416 (73.08%), Postives = 320/416 (76.92%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
M NNGN MGT QPLI IFKGEGYEFWS+RMKTLL SQDLWDLVE Y DPDDEGKL+E R
Sbjct: 1 MSNNGNVMGTAQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
KDSKALVIIQQAVHD+ FSRI TT ++FETL
Sbjct: 61 EKDSKALVIIQQAVHDNVFSRIAAATT---------------------------RDFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMKN ESIA+FLSRATTIISQMQTYGETITDQTIVEKVLRSLT KFD VV AIEESKDLS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVVAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
TFTFIELMGSLQAHESRIN SME+NEEKAF+VKDVVPKYN+SD VMT+G+G GGYR +GR
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNEEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 240
Query: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC-------------------- 300
GT KGC QNEE+ QF VQSSNKANIQCYH KKFGHVKADC
Sbjct: 241 GTGKGCNQNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNHRANFTEQNEASENNG 300
Query: 301 ------------CDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVE 360
DQKT EV FIDSG NHMT LKP+F ELNEGEKLKVELGN KELQVE
Sbjct: 301 NGENKLFMTNIPSDQKTTEVWFIDSGHLNHMTDLKPVFKELNEGEKLKVELGNGKELQVE 360
Query: 361 RKGTVGIETHHGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 385
K T+GIETH+GNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT
Sbjct: 361 GKRTMGIETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 389
BLAST of CsaV3_3G020670 vs. ExPASy TrEMBL
Match:
A0A5A7UQM0 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 PE=4 SV=1)
HSP 1 Score: 544.7 bits (1402), Expect = 3.2e-151
Identity = 290/380 (76.32%), Postives = 312/380 (82.11%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
M NNGN MGTTQPLI IFKGEGYEFWS+RMKTLL SQDLWDLVE Y DPDDEGKL+E R
Sbjct: 1 MSNNGNVMGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENR 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
KD KALVI+QQAVHD+ FSRI TTSK+AWLILQKAF+GD RVLVVKLQSL+++FETL
Sbjct: 61 EKDPKALVIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMKN ESIA+FLSRATTIISQMQTYGETITDQTIVEKVLRSLT KFD VVAAIEESKDLS
Sbjct: 121 MMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
TFTFIELMGSLQAHESRIN SME+N+EKAF+VKDVVPKYN+SD VMT+G+G GGYR +GR
Sbjct: 181 TFTFIELMGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGR 240
Query: 241 GTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC-------------------- 300
GT KGC QNEE+ QF VQSSNKANIQCYH KKFGHVKADC
Sbjct: 241 GTGKGCNQNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNG 300
Query: 301 ------------CDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVE 349
DQKT EV FIDSG NHMTGLKP+F ELNEGEKLKVELGN+KELQVE
Sbjct: 301 KGENKLFMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVE 360
BLAST of CsaV3_3G020670 vs. ExPASy TrEMBL
Match:
A0A5J5B7G1 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027881 PE=4 SV=1)
HSP 1 Score: 491.1 bits (1263), Expect = 4.2e-135
Identity = 257/413 (62.23%), Postives = 321/413 (77.72%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
M +N NAM QPLIL+FKGEGY FWS+RM TL +SQ+LWDLVE YADPD+E +L+E +
Sbjct: 1 MASNDNAMSAAQPLILVFKGEGYGFWSIRMMTLFKSQELWDLVEQGYADPDEETRLKENK 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
+KDSKAL+IIQQAVHDS FSRI TTSK+AW LQK F+GD +V+VVKLQSLR++FETL
Sbjct: 61 KKDSKALMIIQQAVHDSIFSRIAAATTSKQAWSTLQKEFQGDSKVIVVKLQSLRRDFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MK+ ESIA+FLSR TTI+SQM++YGE I+D+T+V KVLRSLT KFD VVAAIEESKDLS
Sbjct: 121 YMKSGESIADFLSRVTTIVSQMRSYGEKISDETVVAKVLRSLTPKFDHVVAAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGR 240
F+F ELMGSLQAHE+RI+RS+E+NEEKAFQVKD+V K SD ++RGRGRGG+RG+GR
Sbjct: 181 VFSFDELMGSLQAHETRIDRSLEQNEEKAFQVKDIVTKAAESDSSISRGRGRGGFRGRGR 240
Query: 241 GTEKGCKQN----EEKGQFRVQSSNKANIQCYHGKKFGHVKADCC--------------- 300
G +G + + + Q Q +NK +QCYH KK+G++KADC
Sbjct: 241 GRGRGNGRGRGRFDGQRQSGEQRNNKNGVQCYHCKKYGYIKADCWYKDQQVNYAAENGEE 300
Query: 301 -----------DQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVERK 360
+ K+++V F+DSGCSNHMTG+K +F EL+E +KLKV+LGN KE+QVE K
Sbjct: 301 SSKLFMIHFDPNNKSSDVWFVDSGCSNHMTGMKSLFKELDEMQKLKVQLGNAKEMQVEGK 360
Query: 361 GTVGIETHHGN-RILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNK 383
GTVGIET HGN ++L NVQ+VPD+GYNLLSVGQLM +G+SILFD+ AC+IK+K
Sbjct: 361 GTVGIETTHGNVKLLYNVQFVPDLGYNLLSVGQLMAAGYSILFDNDACVIKDK 413
BLAST of CsaV3_3G020670 vs. ExPASy TrEMBL
Match:
A0A0V0IV83 (Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1)
HSP 1 Score: 461.5 bits (1186), Expect = 3.6e-126
Identity = 239/412 (58.01%), Postives = 307/412 (74.51%), Query Frame = 0
Query: 1 MDNNGNAMGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKR 60
M NG+++ QPLI +FKGE YEFWS+RMKT+L+SQDLWDLVE Y DPD+E +LR+ +
Sbjct: 1 MATNGSSLSVAQPLIPVFKGESYEFWSIRMKTILKSQDLWDLVERGYTDPDEENRLRDNK 60
Query: 61 RKDSKALVIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETL 120
+KD+KALV IQQAVHDS FSRI TTSK+AW ILQK F+GD +V+VV+LQSLR++FETL
Sbjct: 61 KKDAKALVFIQQAVHDSIFSRIAXATTSKQAWSILQKXFQGDSKVIVVRLQSLRRDFETL 120
Query: 121 MMKNRESIANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLS 180
MMK+ ESIA+FLSRA TI+SQ+++YGE +TDQ IVEKVLRSL KFD VVAAIEESKDLS
Sbjct: 121 MMKSGESIASFLSRAMTIVSQIRSYGEKVTDQIIVEKVLRSLNPKFDHVVAAIEESKDLS 180
Query: 181 TFTFIELMGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYR-GQG 240
F+F ELMGSLQAHE+R NRS+E+NEEKAFQVKD KY +++ +RGRGRGG+R G+G
Sbjct: 181 VFSFDELMGSLQAHEARRNRSVEKNEEKAFQVKDATTKYGDNNGPASRGRGRGGFRGGRG 240
Query: 241 RGTEKGCKQNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC------------------- 300
RG +G +N Q Q + K +QC+H ++GH+KADC
Sbjct: 241 RGFGRGRGRNNGHRQSNEQGNTKNGVQCHHCHRYGHIKADCWFKDQKMNFAAEENEKENY 300
Query: 301 -------CDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVERKGTV 360
+ K +++ F+DSGCSNHMTG K +F +L+E +K KV+LGN KE+QVE KG V
Sbjct: 301 LFMACIDANHKPSDIWFVDSGCSNHMTGAKSMFRDLDEKQKKKVQLGNTKEMQVEGKGKV 360
Query: 361 GIETHHGN-RILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 385
++T H ++L +VQ+VPD+G+NLLSVGQLM G+S+LFDD A I NK++
Sbjct: 361 VVDTSHDKVKMLDDVQFVPDLGFNLLSVGQLMADGYSLLFDDDAYXITNKKS 412
BLAST of CsaV3_3G020670 vs. TAIR 10
Match:
AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 62.4 bits (150), Expect = 9.3e-10
Identity = 26/76 (34.21%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 23 YEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGK--------LREKRRKDSKALVIIQQAV 82
Y+ WS+RMK +L + D+W++VE + +P++EG LR+ R++D KAL +I Q +
Sbjct: 18 YDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGL 77
Query: 83 HDSGFSRIGTTTTSKE 91
+ F ++ T++K+
Sbjct: 78 DEDTFEKVVEATSAKD 93
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8650579.1 | 1.5e-216 | 100.00 | hypothetical protein Csa_010963 [Cucumis sativus] | [more] |
TYK27735.1 | 3.4e-163 | 80.10 | putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | [more] |
TYK28117.1 | 5.2e-156 | 73.08 | putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | [more] |
XP_031738054.1 | 1.7e-151 | 100.00 | uncharacterized protein LOC116402652 [Cucumis sativus] | [more] |
KAA0055915.1 | 6.6e-151 | 76.32 | copia protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P04146 | 4.2e-07 | 21.53 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DWP2 | 1.6e-163 | 80.10 | Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5D3DWC7 | 2.5e-156 | 73.08 | Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5A7UQM0 | 3.2e-151 | 76.32 | Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 ... | [more] |
A0A5J5B7G1 | 4.2e-135 | 62.23 | Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027881 PE=4 SV=1 | [more] |
A0A0V0IV83 | 3.6e-126 | 58.01 | Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G48720.1 | 9.3e-10 | 34.21 | unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B... | [more] |