CsaV3_3G020380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020380
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 16447636 .. 16447882 (+)
RNA-Seq ExpressionCsaV3_3G020380
SyntenyCsaV3_3G020380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAG

mRNA sequence

ATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAG

Coding sequence (CDS)

ATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAG

Protein sequence

MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTX
Homology
[Close]
BLAST of CsaV3_3G020380 vs. NCBI nr
Match: KAE8650570.1 (hypothetical protein Csa_010819, partial [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 4.3e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP 60
          MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP
Sbjct: 1  MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP 60

Query: 61 DSRTSLIVYDPLFYNILMREDT 83
          DSRTSLIVYDPLFYNILMREDT
Sbjct: 61 DSRTSLIVYDPLFYNILMREDT 82

[Close]
BLAST of CsaV3_3G020380 vs. ExPASy TrEMBL
Match: A0A0A0L6W4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263230 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1   MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP 60
           MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP
Sbjct: 34  MRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLP 93

Query: 61  DSRTSLIVYDPLFYNILMREDT 83
           DSRTSLIVYDPLFYNILMREDT
Sbjct: 94  DSRTSLIVYDPLFYNILMREDT 115

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650570.14.3e-39100.00hypothetical protein Csa_010819, partial [Cucumis sativus][more]
BLAST of CsaV3_3G020380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6W42.1e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263230 PE=4 SV=1[more]
BLAST of CsaV3_3G020380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020380.1CsaV3_3G020380.1mRNA