CsaV3_3G020240 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G020240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Homeobox Hox-B3-like protein
Location	chr3: 16230438 .. 16231563 (+)
RNA-Seq Expression	CsaV3_3G020240
Synteny	CsaV3_3G020240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGTTGTGGTGAAGTAAGAAGAACGTTAGAAAAGTGAAATGGAAAGCACACAATCTTTTCCCTTCTCTCTCTTTTACACCTTACCCAAATTTCAGACCGTTGCGAAACCAAATTCCCTTTTTCTTTTCAAACCTCACAAAAACACAAAGCACACTCATTATCTCTTCTTCTTCTTCTTCACCTCATTCAATCAAAACCACAAACCTTCCTCACCCTTCAACAATGGCCCACAAATTCCCCCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCACGATGAACACCCGGAGAAGTCCACCCCGCCGCCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACGCCCCCGGGGAAGACGTGGGGGAAGAATATTGGGGGATTGTCGACGACTTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACGGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGCTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGAATGAAAATAAGAAACAAATTATTGTATTTTCTCGATGGAAGAAGATTGCTCTGTTTATGTGTTACAATGTTTTTTAATTTTTGTTGGTTTTGGTGTTGTTTTTCTAGGATACTTTTGATTCTTTTATTATATAATGGATAATTTGAGTTTGTGGAATAATGAAGTGAGAAGTAAAAGAAAAATGTTGTTATTTGTTCATCTTTGTGTTCATTGATTATACAAGCTTCTTCTAAGTAGAGTTTCAAATCTAATCATTATCTTTTTCCTTTTAATACGAATTTAGTTAC

mRNA sequence

ATGGCCCACAAATTCCCCCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCACGATGAACACCCGGAGAAGTCCACCCCGCCGCCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACGCCCCCGGGGAAGACGTGGGGGAAGAATATTGGGGGATTGTCGACGACTTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACGGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGCTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

Coding sequence (CDS)

ATGGCCCACAAATTCCCCCATCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCGACCACCCCATCTCTCTCCACCTCACACCTGAGCCTTTTTCCATGGAAAGAGGCCCAAGGTACAGAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTGAGAAACGCCATGTATCGCCACGATGAACACCCGGAGAAGTCCACCCCGCCGCCCAAGAAGCAAGTTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGAAAGGAGAATAGAAAGCCGCCGCCGGGGATGTTGTCGCCAGTGATGGAGATGACGCCCCCGGGGAAGACGTGGGGGAAGAATATTGGGGGATTGTCGACGACTTCGAGGGGGAGTAAGTCCGCGAGTGCAGGGGAGAAAAGGGGCGGCGGATTGACGGCGGTGAGGAAAAGCTACGCCGGATTTGAGGAGCTGAAGGGGTTTTCTACGGCGGCGGCGAACGCCATTAATGGTGAAAATAGGAAAGGAGGGAGGAGAGGGAAGACTGTATTGGGGGTTAGACAAATCTGA

Protein sequence

MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAINGENRKGGRRGKTVLGVRQI*

Homology

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_011651352.1 (uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hypothetical protein Csa_011028 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60
           MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL
Sbjct: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60

Query: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120
           RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML
Sbjct: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120

Query: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180
           SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA
Sbjct: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180

Query: 181 ANAINGENRKGGRRGKTVLGVRQI 205
           ANAINGENRKGGRRGKTVLGVRQI
Sbjct: 181 ANAINGENRKGGRRGKTVLGVRQI 204

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: KAA0048497.1 (uncharacterized protein E6C27_scaffold61G001100 [Cucumis melo var. makuwa] >TYK28289.1 uncharacterized protein E5676_scaffold600G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-99
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN+GGLST SRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGENRKGGRRGKTVLGVRQI 205
            A AINGENRKGGR+GKTVLG RQ+
Sbjct: 181 TAKAINGENRKGGRKGKTVLGSRQV 205

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_008461547.1 (PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKR+ATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRTATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN+GGLST SRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGE 188
            A AINGE
Sbjct: 181 TAKAINGE 188

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_038903179.1 (uncharacterized protein LOC120089840 [Benincasa hispida])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 185/211 (87.68%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MAHKF-----PHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRE 60
           MA KF      HLPFHSID RSLLLHQNSAAD PISL LT EPFSMERGPRYRAYAELRE
Sbjct: 1   MADKFNHLAQTHLPFHSIDPRSLLLHQNSAADLPISLQLTAEPFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKP 120
           SKLRLRNAMYR  E PEKSTPP KKQVKFL SET+RKRSA VAQSVPDFSAVLRKENRKP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVKFLDSETLRKRSAAVAQSVPDFSAVLRKENRKP 120

Query: 121 PPGMLSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKG 180
           PPG LSPVMEMTPPGKTWGK IGGLST SRGSKSASAGEKRGGGLTAVRKSYAGFEE+KG
Sbjct: 121 PPG-LSPVMEMTPPGKTWGKKIGGLSTNSRGSKSASAGEKRGGGLTAVRKSYAGFEEMKG 180

Query: 181 FSTAAANAINGENRK--GGRRGKTVLGVRQI 205
           FSTAAANAINGENR+  GGRRGKTVLG+RQI
Sbjct: 181 FSTAAANAINGENRRGGGGRRGKTVLGIRQI 210

[Close]

BLAST of CsaV3_3G020240 vs. NCBI nr
Match: XP_023524771.1 (uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 8.2e-84
Identity = 174/202 (86.14%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66
           HLPFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRNAMYR
Sbjct: 12  HLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYR 71

Query: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+PPPG LSPVMEM
Sbjct: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPG-LSPVMEM 131

Query: 127 TPPGKTWGK--NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAI 186
           TPPGKTWGK  NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAI
Sbjct: 132 TPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAI 191

Query: 187 NGENRK--GGRRGKTVLGVRQI 205
           NGEN++  GGRRGKTVLGVRQI
Sbjct: 192 NGENKRGGGGRRGKTVLGVRQI 212

[Close]

BLAST of CsaV3_3G020240 vs. ExPASy TrEMBL
Match: A0A0A0L9P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 6.8e-108
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60
           MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL
Sbjct: 1   MAHKFPHLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRL 60

Query: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120
           RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML
Sbjct: 61  RNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGML 120

Query: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180
           SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA
Sbjct: 121 SPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAA 180

Query: 181 ANAINGENRKGGRRGKTVLGVRQI 205
           ANAINGENRKGGRRGKTVLGVRQI
Sbjct: 181 ANAINGENRKGGRRGKTVLGVRQI 204

[Close]

BLAST of CsaV3_3G020240 vs. ExPASy TrEMBL
Match: A0A5A7U2K6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001060 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 8.8e-100
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN+GGLST SRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGENRKGGRRGKTVLGVRQI 205
            A AINGENRKGGR+GKTVLG RQ+
Sbjct: 181 TAKAINGENRKGGRKGKTVLGSRQV 205

[Close]

BLAST of CsaV3_3G020240 vs. ExPASy TrEMBL
Match: A0A1S3CEQ6 (uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.5e-91
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MAHKFPHLPFHSIDSRSLLLHQNSAA-DHPISLHLTPEPFSMERGPRYRAYAELRESKLR 60
           MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR
Sbjct: 1   MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLR 60

Query: 61  LRNAMYRHDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGM 120
            RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKR+ATVAQSVPDFSAVLRKENRKPPPGM
Sbjct: 61  FRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRTATVAQSVPDFSAVLRKENRKPPPGM 120

Query: 121 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 180
           LSPVMEMTPPGKTWGKN+GGLST SRGSKSASAGEKRGGGLT VRKSYAGFEELKGFSTA
Sbjct: 121 LSPVMEMTPPGKTWGKNMGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEELKGFSTA 180

Query: 181 AANAINGE 188
            A AINGE
Sbjct: 181 TAKAINGE 188

[Close]

BLAST of CsaV3_3G020240 vs. ExPASy TrEMBL
Match: A0A6J1KFU5 (uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 171/200 (85.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66
           HLPFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRN+MYR
Sbjct: 12  HLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNSMYR 71

Query: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFS+VLRKEN++PPPG LSPVMEM
Sbjct: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRPPPG-LSPVMEM 131

Query: 127 TPPGKTWGK-NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAIN 186
           TPPGKTWGK NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAIN
Sbjct: 132 TPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAIN 191

Query: 187 GENRK-GGRRGKTVLGVRQI 205
           GEN++ GGRRGKTVLGVRQI
Sbjct: 192 GENKRGGGRRGKTVLGVRQI 210

[Close]

BLAST of CsaV3_3G020240 vs. ExPASy TrEMBL
Match: A0A6J1GA97 (uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC111452204 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 173/201 (86.07%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66
           HL FHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRNAMYR
Sbjct: 12  HLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYR 71

Query: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+PPPG LSPVMEM
Sbjct: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPG-LSPVMEM 131

Query: 127 TPPGKTWGK-NIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAIN 186
           TPPGKTWGK NIGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAIN
Sbjct: 132 TPPGKTWGKNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAIN 191

Query: 187 GENRK--GGRRGKTVLGVRQI 205
           GEN++  GGRRGKTVLGVRQI
Sbjct: 192 GENKRGGGGRRGKTVLGVRQI 211

[Close]

BLAST of CsaV3_3G020240 vs. TAIR 10
Match: AT5G38300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-24
Identity = 102/257 (39.69%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 10  FHSIDSRSLLLHQNSAADHPISLHLTPEPFS-MERGPRYRAYAELRESKLRLRNAMYRH- 69
           F S+D  SL+L QNS   H + L L  + FS  ERGPRY  Y+ LRESKLR++    +  
Sbjct: 14  FFSVDPMSLILSQNSDT-HQLKLLL--DGFSGFERGPRYDEYSRLRESKLRMKRDFQKFL 73

Query: 70  DEHPEKSTPPPKKQVKFLGS----------------------------------ETVRKR 129
           +E  E   P  KKQV+F G+                                  E V+K+
Sbjct: 74  EEEDEVEEPRIKKQVRFEGNSVNSQEGDKFSPEKKKQSRFEGISVISQEDRFSPEKVKKQ 133

Query: 130 S------------ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNIGGLS 189
           S            +++AQSVPDFSAV+RKENR+P       +  +TPP  T     GG+ 
Sbjct: 134 SRFGFSPLKKAVPSSLAQSVPDFSAVIRKENRRP-----VNINTITPPPPTSKSRNGGVL 193

Query: 190 T--TSRGSKSASAGEKRGGGLTAV---RKSYAGFEELKGFSTAAANAINGENRKGGRRGK 205
           T   SRGSKSASAGEK+  G+  +   RKSYA  E+LK  S AAA+AING    GG   K
Sbjct: 194 TGSASRGSKSASAGEKKSKGMMMMGMARKSYANVEDLKKISMAAASAINGGGGGGGGGRK 253

[Close]

BLAST of CsaV3_3G020240 vs. TAIR 10
Match: AT1G67035.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1). )

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21
Identity = 85/219 (38.81%), Postives = 117/219 (53.42%), Query Frame = 0


Query: 17  SLLLHQNSAADHPISLHLTPE--PFSMERGPRYRAYAELRESKLRLR---NAMYRHDE-- 76
           SLL   N  +D    L L  +   +  ERG RY  YA LRESKLR++     + + ++  
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 77  ----HPEKSTPPPKKQVKFLGSETVRK----RSATVAQSVPDFSAVLRKENRKPP--PGM 136
                 E+    P+K+ +F  +   RK     S+++AQSVPDFS+++RKENR+PP    +
Sbjct: 72  FGFTREEEIRVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNSNL 131

Query: 137 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 196
           L    E+TPP            +  RGS SASAGEK+G G+  +RKSYA  ++LK  S A
Sbjct: 132 LPRRTELTPPSMKSRNAAVFAGSVIRGSVSASAGEKKGIGM--MRKSYAAVDDLKKISMA 191

Query: 197 AANAINGENRK--------------GGRRGKTVLGVRQI 205
           AA+AING   K              GG  G+T+LG RQI
Sbjct: 192 AASAINGGGGKRRSIGGGGGRKSLGGGGGGRTILGYRQI 228

[Close]

BLAST of CsaV3_3G020240 vs. TAIR 10
Match: AT1G67035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 9.6e-14
Identity = 72/205 (35.12%), Postives = 99/205 (48.29%), Query Frame = 0


Query: 17  SLLLHQNSAADHPISLHLTPE--PFSMERGPRYRAYAELRESKLRLR---NAMYRHDE-- 76
           SLL   N  +D    L L  +   +  ERG RY  YA LRESKLR++     + + ++  
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 77  ----HPEKSTPPPKKQVKFLGSETVRK----RSATVAQSVPDFSAVLRKENRKPP--PGM 136
                 E+    P+K+ +F  +   RK     S+++AQSVPDFS+++RKENR+PP    +
Sbjct: 72  FGFTREEEIRVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNSNL 131

Query: 137 LSPVMEMTPPGKTWGKNIGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTA 196
           L    E+TPP            +  RGS SASAGEK+GG     RKS             
Sbjct: 132 LPRRTELTPPSMKSRNAAVFAGSVIRGSVSASAGEKKGG-----RKSLG----------- 189

Query: 197 AANAINGENRKGGRRGKTVLGVRQI 205
                      GG  G+T+LG RQI
Sbjct: 192 -----------GGGGGRTILGYRQI 189

The following BLAST results are available for this feature:

BLAST of CsaV3_3G020240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651352.1	1.4e-107	100.00	uncharacterized protein LOC101205045 [Cucumis sativus] >KGN57709.1 hypothetical ...	[more]
KAA0048497.1	1.8e-99	93.17	uncharacterized protein E6C27_scaffold61G001100 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008461547.1	1.5e-90	93.62	PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo]	[more]
XP_038903179.1	3.8e-89	87.68	uncharacterized protein LOC120089840 [Benincasa hispida]	[more]
XP_023524771.1	8.2e-84	86.14	uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G020240 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G020240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9P8	6.8e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1	[more]
A0A5A7U2K6	8.8e-100	93.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEQ6	7.5e-91	93.62	uncharacterized protein LOC103500118 OS=Cucumis melo OX=3656 GN=LOC103500118 PE=...	[more]
A0A6J1KFU5	2.6e-83	85.50	uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844...	[more]
A0A6J1GA97	2.6e-83	86.07	uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]

BLAST of CsaV3_3G020240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38300.1	2.1e-24	39.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.2	2.1e-21	38.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.1	9.6e-14	35.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..150
None	No IPR available	PANTHER	PTHR37708	FAMILY NOT NAMED	coord: 9..203
None	No IPR available	PANTHER	PTHR37708:SF2	SUBFAMILY NOT NAMED	coord: 9..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G020240.1	CsaV3_3G020240.1	mRNA